Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00465
         (761 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 97  DSIRDMVPRFSLQLPPWPLLGEYD 26
           D +  ++   S   PP PL+ +YD
Sbjct: 522 DHVISLIDEISYMAPPAPLISQYD 545


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 418 LCSYLYFSFIGYGN 377
           LC++L +SF+G G+
Sbjct: 48  LCTHLIYSFVGLGD 61


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -2

Query: 421 YLCSYLYFSFIG 386
           YLC+++ +SF+G
Sbjct: 51  YLCTHIIYSFVG 62


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 180  LRRCRKPSSRCL*GRSLDK 124
            LR   KP  +C+ GR  DK
Sbjct: 2189 LRGYAKPDPKCILGRDNDK 2207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,869
Number of Sequences: 336
Number of extensions: 3506
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)