Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00465
         (761 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   4.5  
DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted ...    23   7.8  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    23   7.8  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 721 LFWWLPLLSLFQ 686
           LFWW PLL L +
Sbjct: 286 LFWWTPLLRLLR 297


>DQ370046-1|ABD18607.1|  125|Anopheles gambiae putative secreted
           polypeptide protein.
          Length = 125

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 79  VPRFSLQLPPWPLLGEYD 26
           +P+   Q PP P+L +Y+
Sbjct: 103 IPKLFCQRPPLPILSDYE 120


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 51  GGSCNENRGTISRMESTN 104
           GG C  NRG +  +  TN
Sbjct: 7   GGRCKHNRGHVKAVRCTN 24


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,180
Number of Sequences: 2352
Number of extensions: 15243
Number of successful extensions: 109
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 109
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)