Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00465
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50301-13|AAB37054.2|  549|Caenorhabditis elegans Hypothetical p...    80   2e-15
AL132860-26|CAB60511.2|  700|Caenorhabditis elegans Hypothetical...    30   1.6  
Z81567-4|CAB04584.1|  311|Caenorhabditis elegans Hypothetical pr...    30   2.1  
U23175-3|AAC46712.2|  959|Caenorhabditis elegans Anion/bicarbona...    29   3.6  
U23175-2|AAM98009.1|  797|Caenorhabditis elegans Anion/bicarbona...    29   3.6  
U23175-1|AAZ91355.1|  826|Caenorhabditis elegans Anion/bicarbona...    29   3.6  
AY887905-1|AAX34417.1|  959|Caenorhabditis elegans anion transpo...    29   3.6  
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z78200-4|CAB01582.1|  289|Caenorhabditis elegans Hypothetical pr...    28   8.3  
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ...    28   8.3  

>U50301-13|AAB37054.2|  549|Caenorhabditis elegans Hypothetical
           protein F20D6.11 protein.
          Length = 549

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 39/90 (43%), Positives = 53/90 (58%)
 Frame = +2

Query: 206 EGRILRYRNEVXALWSPLINGALGDGRLRCPWHGACFNLKTGDIEDFPGFDSLPCYQVTV 385
           EGRI             L NG    GR+RCP HGACFN+++GDIED+PGFDSL  Y VTV
Sbjct: 53  EGRIYAINGLCSHYNFSLENGTYAKGRIRCPLHGACFNVRSGDIEDYPGFDSLHSYVVTV 112

Query: 386 TDKGEVKVRAKISDLKTNKRIKDMGVVSPC 475
            D G + ++     L +++RI+ +  +  C
Sbjct: 113 ND-GNLIIKTTEKKLGSDRRIRHLPKMKQC 141



 Score = 39.5 bits (88), Expect = 0.003
 Identities = 23/86 (26%), Positives = 39/86 (45%)
 Frame = +1

Query: 499 GRRTSGATCAESLRSEGFKGRITVIAKEPHLPYDRIKVSKIGTVTDIEKLQARSQKYYDD 678
           G   + AT  E  R  G    I VI++E   PYDR+ +SK    T  +    +   +Y++
Sbjct: 150 GGGVATATFIEHSRLNGLITPILVISEESLPPYDRVLLSKKPAATGEDIRLRKDDAFYEE 209

Query: 679 ANIEIMKGVEATKIEPNDKLVHLNNG 756
            N++ +       +    + V L+NG
Sbjct: 210 RNVKFLLKTSVIAVNHKSREVSLSNG 235



 Score = 30.3 bits (65), Expect = 1.6
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 111 VESVVCQENDLKDNEMKVFDIGEDGKVLVVKQKGEFSAIGTKXTHY 248
           VE ++ +  D+     K+F++  D KVLV+  +G   AI    +HY
Sbjct: 22  VEEILGRIEDVPPGTKKMFEV-RDRKVLVINDEGRIYAINGLCSHY 66


>AL132860-26|CAB60511.2|  700|Caenorhabditis elegans Hypothetical
           protein Y56A3A.32 protein.
          Length = 700

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +1

Query: 499 GRRTSGATCAESLRSEGFKGRITVIAKEPHLPYDRIKVSK 618
           G  T+    + S+R++  + ++ +I +EP LPY+R  +SK
Sbjct: 246 GSGTAAYYASLSIRAKQAEAKVLMIGEEPELPYNRPPLSK 285


>Z81567-4|CAB04584.1|  311|Caenorhabditis elegans Hypothetical
           protein K08C9.5 protein.
          Length = 311

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +1

Query: 604 IKVSKIGTVTDIEKLQARSQKYYDDANIE-IMKGVEATKIEPN 729
           +K  K   +TDI +L+ARS+   D  N+E ++ G++A ++ PN
Sbjct: 237 LKFWKSAALTDIRELKARSE---DGWNVEKLLHGLDAREVAPN 276


>U23175-3|AAC46712.2|  959|Caenorhabditis elegans Anion/bicarbonate
           transporter familyprotein 3, isoform a protein.
          Length = 959

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 511 TSSAHYNNNGTFTRRDHTHILYTLVRFEVTYLCSYLY 401
           TSS    + G+  RRD T ILY L+ F   +L  +LY
Sbjct: 626 TSSMSIGDTGSLCRRD-TSILYMLLMFGTLWLGLFLY 661


>U23175-2|AAM98009.1|  797|Caenorhabditis elegans Anion/bicarbonate
           transporter familyprotein 3, isoform b protein.
          Length = 797

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 511 TSSAHYNNNGTFTRRDHTHILYTLVRFEVTYLCSYLY 401
           TSS    + G+  RRD T ILY L+ F   +L  +LY
Sbjct: 464 TSSMSIGDTGSLCRRD-TSILYMLLMFGTLWLGLFLY 499


>U23175-1|AAZ91355.1|  826|Caenorhabditis elegans Anion/bicarbonate
           transporter familyprotein 3, isoform c protein.
          Length = 826

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 511 TSSAHYNNNGTFTRRDHTHILYTLVRFEVTYLCSYLY 401
           TSS    + G+  RRD T ILY L+ F   +L  +LY
Sbjct: 493 TSSMSIGDTGSLCRRD-TSILYMLLMFGTLWLGLFLY 528


>AY887905-1|AAX34417.1|  959|Caenorhabditis elegans anion
           transporter ABTS-3 protein.
          Length = 959

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 511 TSSAHYNNNGTFTRRDHTHILYTLVRFEVTYLCSYLY 401
           TSS    + G+  RRD T ILY L+ F   +L  +LY
Sbjct: 626 TSSMSIGDTGSLCRRD-TSILYMLLMFGTLWLGLFLY 661


>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = -2

Query: 454 ILYTLVRFEVTY---LCSYLYFSFIGYGNLIARQRIKTRKIFNVPGLQIEASPV 302
           +L  L+ F   Y   L S LY +  GYG+  A   +++  + N P   I  SPV
Sbjct: 152 LLNALMDFYTVYPNMLNSDLYIAGEGYGSFFASSLVESLMVNNTPRPDIVTSPV 205


>Z78200-4|CAB01582.1|  289|Caenorhabditis elegans Hypothetical
           protein T04H1.5 protein.
          Length = 289

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +2

Query: 260 INGALGDGRLRCPWHGACFNLKTGDIEDFPG 352
           IN  L DG   C W GA F+     IE  PG
Sbjct: 248 INNYLRDGHFYCIWCGANFSSPEDMIEHCPG 278


>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = -2

Query: 454 ILYTLVRFEVTY---LCSYLYFSFIGYGNLIARQRIKTRKIFNVPGLQIEASPV 302
           +L  L+ F   Y   L S LY +  GYG+  A   +++  + N P   I  SPV
Sbjct: 152 LLNALMDFYTVYPNMLNSDLYIAGEGYGSFFASSLVESLMVNNTPRPDIVTSPV 205


>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = -2

Query: 454 ILYTLVRFEVTY---LCSYLYFSFIGYGNLIARQRIKTRKIFNVPGLQIEASPV 302
           +L  L+ F   Y   L S LY +  GYG+  A   +++  + N P   I  SPV
Sbjct: 152 LLNALMDFYTVYPNMLNSDLYIAGEGYGSFFASSLVESLMVNNTPRPDIVTSPV 205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,754,363
Number of Sequences: 27780
Number of extensions: 341104
Number of successful extensions: 988
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)