Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00464X
         (583 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0259 - 42353992-42354111,42354255-42354385,42355484-423555...    30   1.5  

>01_07_0259 -
           42353992-42354111,42354255-42354385,42355484-42355571,
           42356439-42357282,42357354-42357934,42358962-42359159
          Length = 653

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = -3

Query: 263 GIRKCYKPTVEKLIQNVLKLTLNS*GYECIKINEAFFE----NVKYYLEKIVSHVQFCLQ 96
           GIR+  K   E+  + +L ++  S   E ++  +  FE    N  +YL+  V   + CL+
Sbjct: 584 GIRRASKAMTEQEARQILGISEKSTWEEIVQKYDTMFERNAKNGSFYLQSKVHRAKECLE 643

Query: 95  VFYQ 84
             YQ
Sbjct: 644 AVYQ 647


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,024,113
Number of Sequences: 37544
Number of extensions: 244660
Number of successful extensions: 450
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)