Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00461
         (723 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F665 Cluster: Perilipin; n=1; Bombyx mori|Rep: Perili...   120   3e-26
UniRef50_A0CPG4 Cluster: Chromosome undetermined scaffold_23, wh...    35   1.8  
UniRef50_Q4CSI9 Cluster: Putative uncharacterized protein; n=2; ...    33   5.4  

>UniRef50_Q2F665 Cluster: Perilipin; n=1; Bombyx mori|Rep: Perilipin
           - Bombyx mori (Silk moth)
          Length = 373

 Score =  120 bits (290), Expect = 3e-26
 Identities = 58/58 (100%), Positives = 58/58 (100%)
 Frame = +3

Query: 3   IKGWRSKLEVLLQQLQATSKTYLEHLAIFLAGNEEREKIAPRSAYEQRDDVSSINGVN 176
           IKGWRSKLEVLLQQLQATSKTYLEHLAIFLAGNEEREKIAPRSAYEQRDDVSSINGVN
Sbjct: 316 IKGWRSKLEVLLQQLQATSKTYLEHLAIFLAGNEEREKIAPRSAYEQRDDVSSINGVN 373


>UniRef50_A0CPG4 Cluster: Chromosome undetermined scaffold_23, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_23,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 642

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +2

Query: 569 YLNLFN*CEILFYL*FRYEYITNLVRFATKIQVVDHYLFLHYNMVHIIFVA 721
           Y +L N CEIL ++ F  EY+  L  +      +  +LF H N++ ++ +A
Sbjct: 69  YNDLSNDCEILIFVVFVLEYLFRLSTYTVYGYPIKKFLFQHMNIIDLLSIA 119


>UniRef50_Q4CSI9 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 325

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 404 YREYIFTITYFKL*CKYKYLVRNKFELCSNLKFHSVFQREYINHN 270
           YR Y F  T+ K  C   +L+R  F  CS+  F  +    +I+ N
Sbjct: 24  YRLYTFVFTFLKFWCVGLFLLRLAFHFCSHWLFVGIIGMSFIDDN 68


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,684,838
Number of Sequences: 1657284
Number of extensions: 12273029
Number of successful extensions: 28399
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28383
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)