Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00461
         (723 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   3.3  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   3.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.6  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   7.6  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.6  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.6  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 37  CSSCRPHPKLTW 72
           C  CRP  +LTW
Sbjct: 587 CKPCRPREQLTW 598



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = -1

Query: 162 WKTRRLFARKPTVAQSSPAPRYRPRIWLNAPSKFWMWPATAAAGP 28
           W T  ++   P     SP P   P    + PS F+ +  T    P
Sbjct: 188 WHTPSMYPLSPGAGFRSPYPSALPISTSSLPSDFYRFSPTGLIPP 232


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 37  CSSCRPHPKLTW 72
           C  CRP  +LTW
Sbjct: 479 CKPCRPREQLTW 490



 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/45 (26%), Positives = 17/45 (37%)
 Frame = -1

Query: 162 WKTRRLFARKPTVAQSSPAPRYRPRIWLNAPSKFWMWPATAAAGP 28
           W T  ++   P     SP P   P    + PS F+ +  T    P
Sbjct: 80  WHTPSMYPLSPGAGFRSPYPSALPISTSSLPSDFYRFSPTGLIPP 124


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 418 TLTRVIGNIFLQLHTLNYNVNISILYV 338
           T+  ++  +    HT+  N NIS+LY+
Sbjct: 857 TMANILDLLMDYEHTVKINENISMLYI 883



 Score = 21.4 bits (43), Expect = 7.6
 Identities = 5/24 (20%), Positives = 16/24 (66%)
 Frame = +2

Query: 506 KWLI*NVGNVLEIILSFEESKYLN 577
           +W+   + N+L++++ +E +  +N
Sbjct: 852 RWMPSTMANILDLLMDYEHTVKIN 875


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 418 TLTRVIGNIFLQLHTLNYNVNISILYV 338
           T+  ++  +    HT+  N NIS+LY+
Sbjct: 857 TMANILDLLMDYEHTVKINENISMLYI 883



 Score = 21.4 bits (43), Expect = 7.6
 Identities = 5/24 (20%), Positives = 16/24 (66%)
 Frame = +2

Query: 506 KWLI*NVGNVLEIILSFEESKYLN 577
           +W+   + N+L++++ +E +  +N
Sbjct: 852 RWMPSTMANILDLLMDYEHTVKIN 875


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 400 GNIFLQLHTLNYNVNISIL--YVTNLSCVLI*SFILF 296
           G + + L+T+NYN   S    YV+ L  V +  + ++
Sbjct: 116 GKLLINLYTINYNFKESERNDYVSLLQLVFVFCYFIY 152


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 310 SFILFSSVNILIIIAXXXXXXXDVYTYL 227
           SF+L +++ +L+I++         YTY+
Sbjct: 27  SFLLLTTLTLLVILSSIDRPYLKSYTYI 54


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +1

Query: 13  GEANLRSCCSSCRPHPKLTWSI 78
           G +    C +S  P P++TW +
Sbjct: 428 GNSVFLKCIASGNPTPEITWEL 449


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -2

Query: 398 EYIFTITYFKL*CKYKYLVRNKFELCSNLKFHS 300
           EY+  I    + C Y  L+RNK    +    HS
Sbjct: 170 EYVQAIEVLYI-CSYTVLIRNKISNLNTSLIHS 201


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 448 INQHKKKHENIFQCS 492
           +N H K H N+++ S
Sbjct: 274 LNSHMKSHSNVYRYS 288


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 448 INQHKKKHENIFQCS 492
           +N H K H N+++ S
Sbjct: 32  LNSHMKSHSNVYRYS 46


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 325 SSNLLRTRYLYLHYSLKYVIVK 390
           SSNL +  Y+Y +   K V+V+
Sbjct: 456 SSNLSKRPYIYKYLDKKNVVVQ 477


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 539 EIILSFEESKYLNLFN*CEILFYL 610
           E +   E  KY N+   C I+ YL
Sbjct: 319 EQVYHLEIEKYYNILYFCRIMVYL 342


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 5/24 (20%), Positives = 16/24 (66%)
 Frame = +2

Query: 506 KWLI*NVGNVLEIILSFEESKYLN 577
           +W+   + N+L++++ +E +  +N
Sbjct: 619 RWMPSTMANILDLLMDYEHTVKIN 642


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,609
Number of Sequences: 336
Number of extensions: 3492
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)