Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00460
         (739 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055757-1|AAL25832.1|  316|Homo sapiens decay-accelerating fact...    33   1.1  
AB240569-1|BAE97425.1|  525|Homo sapiens decay-accelerating fact...    33   1.1  
L02785-1|AAA58443.1|  764|Homo sapiens DRA protein.                    30   7.5  
BC025671-1|AAH25671.1|  764|Homo sapiens solute carrier family 2...    30   7.5  
AF367051-1|AAM00371.1|  967|Homo sapiens DOC-2/DAB2 interactive ...    30   10.0 

>AY055757-1|AAL25832.1|  316|Homo sapiens decay-accelerating factor
           1a protein.
          Length = 316

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +1

Query: 418 AEVFPSKFLDSQV-FTQARETAAVIPPDVPRNLLSFHETTLRRT*KKNTALRTGEKISAS 594
           A +   KF  ++V FTQ+   A      V R    FHETT  +     T   T   +S  
Sbjct: 240 ATLTAQKFTTAKVAFTQSPSAAPTRSTPVSRTTKHFHETTPNK--GSGTTSGTTRLLSGH 297

Query: 595 TCIIITGIWST 627
           TC  +TG+  T
Sbjct: 298 TCFTLTGLLGT 308


>AB240569-1|BAE97425.1|  525|Homo sapiens decay-accelerating factor
           splicing variant 4 protein.
          Length = 525

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = +1

Query: 418 AEVFPSKFLDSQV-FTQARETAAVIPPDVPRNLLSFHETTLRRT*KKNTALRTGEKISAS 594
           A +   KF  ++V FTQ+   A      V R    FHETT  +     T   T   +S  
Sbjct: 449 ATLTAQKFTTAKVAFTQSPSAAPTRSTPVSRTTKHFHETTPNK--GSGTTSGTTRLLSGH 506

Query: 595 TCIIITGIWST 627
           TC  +TG+  T
Sbjct: 507 TCFTLTGLLGT 517


>L02785-1|AAA58443.1|  764|Homo sapiens DRA protein.
          Length = 764

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 377 CTDVIPEKSELRILQKYFPLNSWIPKYSLR 466
           C    P+K++ RI+   FP+ SW+P Y L+
Sbjct: 42  CCSCSPQKAK-RIVLSLFPIASWLPAYRLK 70


>BC025671-1|AAH25671.1|  764|Homo sapiens solute carrier family 26,
           member 3 protein.
          Length = 764

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 377 CTDVIPEKSELRILQKYFPLNSWIPKYSLR 466
           C    P+K++ RI+   FP+ SW+P Y L+
Sbjct: 42  CCSCSPQKAK-RIVLSLFPIASWLPAYRLK 70


>AF367051-1|AAM00371.1|  967|Homo sapiens DOC-2/DAB2 interactive
           protein protein.
          Length = 967

 Score = 29.9 bits (64), Expect = 10.0
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
 Frame = +3

Query: 177 NLKL--QLNYPRTLNSHCFYLNIKKWQMTSWRSHGCTR------ERITRFAIDMR-LCTS 329
           NLK+  +L + +T+NS+C +    K    SWR    +R      ER+   ++ +R LC +
Sbjct: 277 NLKMCCELAFCKTINSYCVFPRELKEVFASWRQECSSRGRPDISERLISASLFLRFLCPA 336

Query: 330 KPEPSVVQLL 359
              PS+  LL
Sbjct: 337 IMSPSLFNLL 346


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,961,145
Number of Sequences: 237096
Number of extensions: 2311720
Number of successful extensions: 4572
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4572
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)