Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00460
         (739 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81542-1|CAB04414.1|  379|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical p...    29   3.4  
AL132860-27|CAB60521.1|  365|Caenorhabditis elegans Hypothetical...    29   3.4  
AF003131-6|AAB54131.2|  166|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p...    28   7.9  
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p...    28   7.9  
AL032654-1|CAA21717.2|  179|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z81542-1|CAB04414.1|  379|Caenorhabditis elegans Hypothetical
           protein F49A5.2 protein.
          Length = 379

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +3

Query: 177 NLKLQLNYPRTLNSHCFYLNIKKWQMTSWRSHGCTR 284
           +L +  N  RTLN +C ++++ K +   W +  CT+
Sbjct: 319 SLPVYNNIKRTLNGNCLFMSVSKHRRGFWYTVECTQ 354


>Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical
           protein T09E11.4 protein.
          Length = 671

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +1

Query: 277 VPENELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVKNF 417
           + EN L+  +  C +   NL    FN C  +A        K+++K +
Sbjct: 447 IAENHLKMFIQECGYRSYNLRAYTFNGCEPLAAFETEPHCKIQLKEY 493


>AL132860-27|CAB60521.1|  365|Caenorhabditis elegans Hypothetical
           protein Y56A3A.33 protein.
          Length = 365

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -2

Query: 453 LGIQEFRGKYFCKILNSDFSGITSVHQCHRVTIVEQLRVQVYSCKG 316
           L +Q    KY CK + S+ SG +S+   H    +   R   + C G
Sbjct: 298 LSLQNLAKKYLCKDVQSEASGHSSIEDSHTCMELLATRHLFFYCHG 343


>AF003131-6|AAB54131.2|  166|Caenorhabditis elegans Hypothetical
           protein C09D1.2 protein.
          Length = 166

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 10/54 (18%), Positives = 27/54 (50%)
 Frame = +3

Query: 573 WREDIGINLHHYHWHLVYPFTANDLSIVAKDRRGELFFYMHQQVIARFNCERLC 734
           W    G   ++ +W    PF    L+++  ++RG+   +   ++++++N   +C
Sbjct: 109 WHWMDGSEFNYMNWDRGMPFGRRALAVLVMNKRGKWINHYADKILSQYNAVAVC 162


>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
            protein C25G4.10 protein.
          Length = 1208

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 509  LRGTSGGITAAVSRA*VNTWESKNLEGNTS 420
            +RG  G  T   + A  + W+S NLE N++
Sbjct: 1161 IRGLGGSATTGTAAATQSEWQSANLEANST 1190


>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical protein
            T04A11.3 protein.
          Length = 1014

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 509  LRGTSGGITAAVSRA*VNTWESKNLEGNTS 420
            +RG  G  T   + A  + W+S NLE N++
Sbjct: 967  IRGLGGSATTGTAAATQSEWQSANLEANST 996


>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
            protein C25G4.10 protein.
          Length = 1208

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 509  LRGTSGGITAAVSRA*VNTWESKNLEGNTS 420
            +RG  G  T   + A  + W+S NLE N++
Sbjct: 1161 IRGLGGSATTGTAAATQSEWQSANLEANST 1190


>AL032654-1|CAA21717.2|  179|Caenorhabditis elegans Hypothetical
           protein Y52B11A.1 protein.
          Length = 179

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 294 TRFAIDMRLCTSKPEPSVVQLLLL 365
           TRF I MR  TSK EP++ +LL L
Sbjct: 96  TRFIISMRDFTSKEEPTLSELLNL 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,367,642
Number of Sequences: 27780
Number of extensions: 379988
Number of successful extensions: 1003
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)