Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00459
         (766 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132952-1|CAB61134.2|  214|Caenorhabditis elegans Hypothetical ...    31   0.68 
AC084197-45|AAK68589.4|  751|Caenorhabditis elegans Hypothetical...    31   0.68 
Z98877-1|CAB11569.2|  343|Caenorhabditis elegans Hypothetical pr...    31   0.90 
Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical pr...    31   0.90 
Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical pr...    31   0.90 
Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase prot...    29   3.6  
Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z71261-2|CAA95805.1|  813|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical...    28   6.3  
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical...    28   6.3  
Z73897-3|CAE18053.1|  178|Caenorhabditis elegans Hypothetical pr...    28   8.4  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    28   8.4  
AF067215-5|AAC17010.3|  441|Caenorhabditis elegans T box family ...    28   8.4  

>AL132952-1|CAB61134.2|  214|Caenorhabditis elegans Hypothetical
           protein Y51H4A.1 protein.
          Length = 214

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 16/63 (25%), Positives = 33/63 (52%)
 Frame = +3

Query: 333 VFQKHKESAYVRPYTRSELENPGVQVRSVSVETPGGQPNTLNTFWMLSDVNLSRGLDFST 512
           V + H E+A V  Y   E++    +V   + +TP G P + ++  + S++   + ++FS+
Sbjct: 70  VIELHTEAAPVENYLEEEIQIKVPEVEEDTEKTPAGSPKSTSS-CISSEILSEQSIEFSS 128

Query: 513 TGP 521
             P
Sbjct: 129 ISP 131


>AC084197-45|AAK68589.4|  751|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.1 protein.
          Length = 751

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
 Frame = +3

Query: 294 DPFFYRWHAYIDDVFQKHKESAYVRP------YTRSELENPG--VQVRSVSVETPGGQPN 449
           DP FY  HA+ID++++K ++++  R        T++  +N G  VQ++  +++   G  N
Sbjct: 297 DPTFYMHHAFIDNLWEKFRQNSQTREERENQWATKNCNDNHGFDVQMKPFTIQNRDGLSN 356

Query: 450 TLNTFW 467
                W
Sbjct: 357 QYTDEW 362


>Z98877-1|CAB11569.2|  343|Caenorhabditis elegans Hypothetical
           protein Y69H2.1 protein.
          Length = 343

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
 Frame = -3

Query: 353 FLVLLENVID--VGVP-AVEEWIAHRCGLISDNTKLSR-YLCSGSCMYAVKLCPLLCIEP 186
           F++LL++V +  +  P  + +W     G+ S N   +  Y+ S SC++ V L  ++CI P
Sbjct: 249 FVILLQSVTEFILSFPLTMRQWKVLLAGIRSVNYFCAYGYMFSFSCIFMVPLVSMMCIPP 308

Query: 185 YSSLFGEMALDSNM-LPSVSMSRGRVCPFGNL 93
               F +    S +  P++++   R   F N+
Sbjct: 309 IRRAFLDFFTCSGLKKPAIAIVDRRKFKFDNV 340


>Z93395-2|CAB07705.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 23/67 (34%), Positives = 32/67 (47%)
 Frame = +1

Query: 526 RSLHSPQLQAFQLQNKREQHR*QPSHHSAYLHHSEVRRAQCPLDILGPTQDVY*NGQIRH 705
           R  H  Q Q  Q Q++++Q +    HH A  HHS+    Q P     P+QD +   + R 
Sbjct: 663 RQQHERQQQERQQQDRQQQAQ---QHHQAQQHHSQ----QHPAQPAQPSQDHHEEHRRRL 715

Query: 706 CPERRRE 726
              RRRE
Sbjct: 716 EEHRRRE 722


>Z83112-5|CAB05541.1|  905|Caenorhabditis elegans Hypothetical
           protein ZC101.1 protein.
          Length = 905

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 23/67 (34%), Positives = 32/67 (47%)
 Frame = +1

Query: 526 RSLHSPQLQAFQLQNKREQHR*QPSHHSAYLHHSEVRRAQCPLDILGPTQDVY*NGQIRH 705
           R  H  Q Q  Q Q++++Q +    HH A  HHS+    Q P     P+QD +   + R 
Sbjct: 663 RQQHERQQQERQQQDRQQQAQ---QHHQAQQHHSQ----QHPAQPAQPSQDHHEEHRRRL 715

Query: 706 CPERRRE 726
              RRRE
Sbjct: 716 EEHRRRE 722


>Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical
           protein F23D12.2 protein.
          Length = 1322

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +1

Query: 232 DPEHRYLDNLVLSLMRPQRCAIHSSTAGTPTSMTFSRSTRNLPTCVLTLDLSSRT 396
           D E+ Y+ + ++SL   Q C+  S    T  + +   STR  PT +  L  +S++
Sbjct: 796 DLENNYVGSQLMSLPTSQACSTSSRICTTRKTFSSDTSTRIYPTTLEHLPANSKS 850


>U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase protein
           4 protein.
          Length = 751

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = +3

Query: 261 GVIADEATTMRDPFFYRWHAYIDDVFQK 344
           G + D AT+  DP F+  HA+ID V+++
Sbjct: 291 GDMFDTATSSNDPSFFLHHAFIDFVWEE 318


>Z82268-9|CAD89738.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 438 RRASPPTRTSLARPGSRAQIECKDAR 361
           RRASPP RTS  +  +R   E +D+R
Sbjct: 232 RRASPPRRTSSPKRDARPAREIRDSR 257


>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 438 RRASPPTRTSLARPGSRAQIECKDAR 361
           RRASPP RTS  +  +R   E +D+R
Sbjct: 232 RRASPPRRTSSPKRDARPAREIRDSR 257


>Z71261-2|CAA95805.1|  813|Caenorhabditis elegans Hypothetical
           protein F21C3.2 protein.
          Length = 813

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 9/36 (25%), Positives = 22/36 (61%)
 Frame = +3

Query: 261 GVIADEATTMRDPFFYRWHAYIDDVFQKHKESAYVR 368
           G + + +T   DP F+  H+++D +++ +++S   R
Sbjct: 410 GDMLETSTAANDPIFWMHHSFVDLLWEMYRQSKQTR 445


>AL023835-17|CAD89760.1|  509|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1b protein.
          Length = 509

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 438 RRASPPTRTSLARPGSRAQIECKDAR 361
           RRASPP RTS  +  +R   E +D+R
Sbjct: 232 RRASPPRRTSSPKRDARPAREIRDSR 257


>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
           protein Y37A1B.1a protein.
          Length = 1222

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 438 RRASPPTRTSLARPGSRAQIECKDAR 361
           RRASPP RTS  +  +R   E +D+R
Sbjct: 232 RRASPPRRTSSPKRDARPAREIRDSR 257


>Z73897-3|CAE18053.1|  178|Caenorhabditis elegans Hypothetical
           protein ZK617.4 protein.
          Length = 178

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 24/73 (32%), Positives = 30/73 (41%)
 Frame = +3

Query: 315 HAYIDDVFQKHKESAYVRPYTRSELENPGVQVRSVSVETPGGQPNTLNTFWMLSDVNLSR 494
           HA+I     K  E      + RS L+  G   R  S +  G  PN L      S VN S 
Sbjct: 107 HAFI---LSKMPEGEAKERFLRSILDLEGPDSRRGSRDDVGS-PNMLKKTNSKSSVNSSS 162

Query: 495 GLDFSTTGPCTLA 533
            + F T   CTL+
Sbjct: 163 NVSFITNHSCTLS 175


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +1

Query: 544 QLQAFQLQNKREQHR*QPSHHSAYLHHSEVRRAQCP 651
           QLQ    Q +++Q   +P H S++ HH E RR + P
Sbjct: 184 QLQQQHHQQQQQQLAFRPRHRSSH-HHQEPRRHRAP 218


>AF067215-5|AAC17010.3|  441|Caenorhabditis elegans T box family
           protein 32 protein.
          Length = 441

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -2

Query: 726 FSPAFRTVTNLSISIHILRWSENIQGTLRSSNFGVMK 616
           + P  R  T+  IS+ +  WS+    T+ SSN  V +
Sbjct: 144 YVPVLRFTTSSGISLEVTVWSQKFVTTMTSSNRSVKR 180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,530,200
Number of Sequences: 27780
Number of extensions: 416027
Number of successful extensions: 1624
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1623
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)