Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00459
         (766 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g45020.1 68418.m05520 expressed protein                             32   0.36 
At4g19880.1 68417.m02914 glutathione S-transferase-related conta...    30   1.5  
At3g50370.1 68416.m05508 expressed protein                             29   2.6  
At1g22690.1 68414.m02835 gibberellin-responsive protein, putativ...    29   2.6  
At2g39920.1 68415.m04906 acid phosphatase class B family protein...    28   5.9  
At4g17120.1 68417.m02578 expressed protein                             28   7.8  
At2g21420.1 68415.m02549 zinc finger protein-related contains lo...    28   7.8  

>At5g45020.1 68418.m05520 expressed protein
          Length = 325

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
 Frame = -1

Query: 709 DSDESVHFNTHLALVREYPGDIALVELRSDEDTHCGATAATGVVHV--YSVAEMPVVEVS 536
           D   +VHF  +  L+REYP     +  +     H G ++   + H+  +     P +   
Sbjct: 247 DEVYAVHFKCNKRLLREYPNIFNYI--KDIYQIH-GMSSTVNMEHIKQHYYGSHPTINPF 303

Query: 535 EASVHGPVVEKSSP--RDKFTS 476
               HGP ++ SSP  RD+F+S
Sbjct: 304 GIIPHGPNIDYSSPHDRDRFSS 325


>At4g19880.1 68417.m02914 glutathione S-transferase-related contains
           weak hit to Pfam profile PF00043: Glutathione
           S-transferase, C-terminal domain
          Length = 325

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = -1

Query: 709 DSDESVHFNTHLALVREYPGDIALVELRSDEDTHCGATAATGVVHV--YSVAEMPVVEVS 536
           D   +VHF  +  L+REYP    L     D     G ++   + H+  +     P +   
Sbjct: 247 DEVYAVHFKCNKKLIREYPN---LFNYTKDIFQIPGMSSTVNMNHIKQHYYGSHPSINPF 303

Query: 535 EASVHGPVVEKSSPRDK 485
               HGP ++ +SP D+
Sbjct: 304 GIIPHGPNIDYTSPHDR 320


>At3g50370.1 68416.m05508 expressed protein
          Length = 2179

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 544  QLQAFQLQNKREQHR*QPSHHSAYLHHSEVR 636
            Q Q+ Q +N + QH   PSHH  + HH   R
Sbjct: 2100 QQQSSQEKNTQSQHVGGPSHHHQHQHHQNRR 2130


>At1g22690.1 68414.m02835 gibberellin-responsive protein, putative
           similar to SP|P46688 Gibberellin-regulated protein 2
           precursor {Arabidopsis thaliana}; contains Pfam profile
           PF02704: Gibberellin regulated protein
          Length = 119

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -3

Query: 665 PRISRGH-CARRTSE**RYALWCDGCYRCCSRLFC 564
           PRI+ GH CARR S+  R  +    C  CC++  C
Sbjct: 57  PRINCGHACARRCSKTSRKKVCHRACGSCCAKCQC 91


>At2g39920.1 68415.m04906 acid phosphatase class B family protein
           weak similarity to pod storage protein [Phaseolus
           vulgaris GI:2627233 SP|P10743 STEM 31 kDa glycoprotein
           precursor (Vegetative storage protein B) {Glycine max};
           contains Pfam profile PF03767: HAD superfamily
           (subfamily IIIB) phosphatase
          Length = 283

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 39  RNGTLEKKR*RSYRDWYR*IAKRADSAS*HRYARQH 146
           RN T+E+ + R Y DW   I  R D+       R H
Sbjct: 207 RNATIEQLKSRGYSDWSHLIMSREDTRQKEELERGH 242


>At4g17120.1 68417.m02578 expressed protein
          Length = 1661

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 91  VRLPNGQTRPLDIDTLGNMLES 156
           V++P+G  RP+ +  L NML+S
Sbjct: 515 VKMPSGDVRPVKVPVLTNMLDS 536


>At2g21420.1 68415.m02549 zinc finger protein-related contains low
           similarity to zinc finger proteins and Pfam PF01485: IBR
           domain
          Length = 468

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -3

Query: 317 VPAVEEWIA--HRCGLISDNTKLSRYLCSGSCMYAVKLCPLLCIE 189
           VPA ++      RC ++   T LSR     +    +K C L CI+
Sbjct: 265 VPAADKIYCPYRRCSMLMSKTALSRETDQSNVRACIKCCRLFCID 309


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,355,687
Number of Sequences: 28952
Number of extensions: 372767
Number of successful extensions: 1201
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)