Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00457
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0970 + 21338072-21338074,21338192-21338240,21338688-213389... 118 4e-27
02_04_0177 + 20669053-20669055,20669150-20669198,20669680-206699... 118 4e-27
01_07_0270 - 42417782-42417850,42418207-42418342,42418826-424191... 114 4e-26
11_06_0257 + 21746643-21748091 31 0.74
01_07_0054 - 40779336-40779599,40779734-40779848,40779998-407801... 31 0.74
01_01_0743 - 5763654-5766902 31 0.74
11_01_0746 + 6294277-6294687 30 0.98
06_03_0930 - 26038341-26038508,26039114-26039254,26040799-260408... 30 1.3
06_01_1074 - 8765183-8765278,8765657-8765749,8766520-8766600,876... 29 1.7
03_06_0519 - 34481751-34482722 29 3.0
10_08_0074 - 14668625-14669797 28 4.0
02_05_0460 - 29224525-29224620,29225525-29226625 28 4.0
12_02_0020 - 12388777-12389062,12389637-12389818 28 5.2
03_05_0528 - 25268396-25269217 28 5.2
01_06_1758 - 39681942-39682030,39682115-39682345,39682643-396826... 28 5.2
01_06_0513 - 29944888-29945943 28 5.2
01_05_0305 + 20659199-20660026,20660147-20660179 28 5.2
08_02_0955 + 22994266-22995630 27 6.9
06_01_0238 + 1815258-1815581,1816286-1816530,1816612-1816765,181... 27 6.9
09_03_0062 - 11969719-11970036,11970115-11970843 27 9.1
02_05_0146 - 26267245-26267339,26267427-26267469,26267589-262677... 27 9.1
>04_03_0970 +
21338072-21338074,21338192-21338240,21338688-21338970,
21339570-21339705,21339761-21339769
Length = 159
Score = 118 bits (283), Expect = 4e-27
Identities = 51/84 (60%), Positives = 70/84 (83%)
Frame = +2
Query: 2 PKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWR 181
PK+NR I +YLF+EGV+ AKKDY+ KH +++ +PNLQVIK MQS KS+ YV+E F+W+
Sbjct: 4 PKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETFSWQ 62
Query: 182 HFYWYLTNEGIEYLRIFLHLPPEI 253
++YWYLTN+GIE+LR +L+LP EI
Sbjct: 63 YYYWYLTNDGIEHLRNYLNLPSEI 86
>02_04_0177 +
20669053-20669055,20669150-20669198,20669680-20669962,
20670526-20670661,20671014-20671094
Length = 183
Score = 118 bits (283), Expect = 4e-27
Identities = 51/84 (60%), Positives = 70/84 (83%)
Frame = +2
Query: 2 PKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWR 181
PK+NR I +YLF+EGV+ AKKDY+ KH +++ +PNLQVIK MQS KS+ YV+E F+W+
Sbjct: 4 PKKNRNEICKYLFQEGVLYAKKDYNLAKHPQID-VPNLQVIKLMQSFKSKEYVRETFSWQ 62
Query: 182 HFYWYLTNEGIEYLRIFLHLPPEI 253
++YWYLTN+GIE+LR +L+LP EI
Sbjct: 63 YYYWYLTNDGIEHLRNYLNLPSEI 86
>01_07_0270 -
42417782-42417850,42418207-42418342,42418826-42419108,
42419459-42419507,42419614-42419616
Length = 179
Score = 114 bits (275), Expect = 4e-26
Identities = 49/83 (59%), Positives = 68/83 (81%)
Frame = +2
Query: 5 KQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRH 184
K+NR I +YLF EGV+ AKKDY+ KH +++ +PNL+VIK MQS KS+ YV+E F+W+H
Sbjct: 5 KKNRREICKYLFHEGVLYAKKDYNLAKHPKVD-VPNLEVIKLMQSFKSKEYVRETFSWQH 63
Query: 185 FYWYLTNEGIEYLRIFLHLPPEI 253
+YWYLTN+GIE+LR +L+LP E+
Sbjct: 64 YYWYLTNDGIEHLRSYLNLPSEV 86
>11_06_0257 + 21746643-21748091
Length = 482
Score = 30.7 bits (66), Expect = 0.74
Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +2
Query: 23 IYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQF-AWRHFYWYL 199
+YE L + + + D+H K ++ + N + + S E F + + Y+
Sbjct: 370 LYEDLITRDIQLYRTDFHGKKLDAMDSLDNHALFLGYNT--SLCLPTEDFPGLKPNHAYI 427
Query: 200 TNEGIEYLRIFLHLPPEIGLQHLSAQYVQ 286
T++ +E++ F EIG+ ++ +Q ++
Sbjct: 428 TDDSLEFVNYFKRNKKEIGMWNIESQILE 456
>01_07_0054 -
40779336-40779599,40779734-40779848,40779998-40780181,
40780322-40780393,40780485-40780611,40780830-40781011,
40781099-40781249
Length = 364
Score = 30.7 bits (66), Expect = 0.74
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +2
Query: 23 IYEYLFKEGVMVA-KKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYL 199
+Y+ L ++G +VA KK + P H + ++ L I+ + GY +E Y Y+
Sbjct: 84 VYKGLLQDGTIVAIKKRHSPPSHEFIHEVNYLSSIRHRNLVNLLGYCQENGMQMLVYEYV 143
Query: 200 TNEGIE-YLRIFLHLP 244
N + +L H P
Sbjct: 144 PNGSVSTHLHGSSHAP 159
>01_01_0743 - 5763654-5766902
Length = 1082
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -1
Query: 350 DLSSAERAGASGRPTGPRRTVSVRTERLSVAGQFQEEGARIFSS 219
+ +SA R + R PR V V+ ERL AG+ EE R+ S
Sbjct: 44 EAASAPRGAKNSRSRAPRTDVDVQIERLCRAGEL-EEALRLLGS 86
>11_01_0746 + 6294277-6294687
Length = 136
Score = 30.3 bits (65), Expect = 0.98
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = -1
Query: 383 TPGAA---GVRLYADLSSAERAGASGRPT--GPRRTVSVRTERLSVAGQFQEEGARIFSS 219
T GAA G + ++ R+GAS RPT G + V +E ++V G+ + + A + SS
Sbjct: 51 TKGAAATLGGNSTGEEAARSRSGASSRPTGGGVGKGVDGGSEVVAVLGRTEADPAALSSS 110
Query: 218 IQYPHWLG 195
+ W G
Sbjct: 111 SAWEEWRG 118
>06_03_0930 -
26038341-26038508,26039114-26039254,26040799-26040858,
26040972-26041034,26041444-26041454,26041722-26041802,
26042783-26043020,26043563-26043997
Length = 398
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 328 ARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRG 459
AR RS+ RR+P+ G A + G ++ L++ GG G G
Sbjct: 58 ARGKRSRSSRRRSPSGSGSAATKGRWARGSPASPLDYSGGSGSG 101
>06_01_1074 -
8765183-8765278,8765657-8765749,8766520-8766600,
8767092-8767173,8767261-8767313,8767391-8767456,
8767534-8767697,8768028-8768295
Length = 300
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/44 (40%), Positives = 20/44 (45%)
Frame = +1
Query: 334 SAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRGRP 465
SA RS R TP P + PH K+A P S L G G P
Sbjct: 3 SAAPRS--RLTPPTPAMHPHRKRARSPPASGSLVRCSSSGNGAP 44
>03_06_0519 - 34481751-34482722
Length = 323
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +1
Query: 295 RRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRGRPAS 471
R+G G PA S+ + RR+ G AP D A+ GP S + PA+
Sbjct: 23 RKGKRGAEAPPATSSSTPTTARRSKRLAG-APPDHPAEAGPSSTNARRSSRLAGAPPAT 80
>10_08_0074 - 14668625-14669797
Length = 390
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 137 SLKSRGYVKEQFAWR-HFYWY-LTNEGIEYLRIFLHLPPEIGLQHLSAQY 280
+LKSR + WR H+Y T E EY+ +FLHL + +++ AQ+
Sbjct: 57 ALKSRAFTIGGHQWRIHYYPNGNTEECGEYISLFLHLDEIVTDKNVYAQH 106
>02_05_0460 - 29224525-29224620,29225525-29226625
Length = 398
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 304 PVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSA 426
PV APA AE S R P P PH A V SA
Sbjct: 270 PVSPASAPAALAESSSEELRPPPLPSSHPHAHAAAVVAASA 310
>12_02_0020 - 12388777-12389062,12389637-12389818
Length = 155
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 307 VGRPDAPARSAEDRSAYRRTPAAP 378
+GRP R E+RS +RTP+ P
Sbjct: 47 IGRPKGEGREWEERSRSQRTPSPP 70
>03_05_0528 - 25268396-25269217
Length = 273
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 415 PGSADLEFKGGYGRG 459
PGS +LE GGYG G
Sbjct: 106 PGSTELEINGGYGEG 120
>01_06_1758 -
39681942-39682030,39682115-39682345,39682643-39682679,
39683604-39683835,39683937-39684022,39684126-39684218,
39684302-39684465,39684541-39684702,39684783-39684962,
39685079-39685515,39685614-39685669
Length = 588
Score = 27.9 bits (59), Expect = 5.2
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 280 RTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAP--HDKKADVGPGSADLEFKGGYG 453
R + PV APA + +AY PAAP VAP D G G GG+G
Sbjct: 17 RRSDLAGAPVLAASAPAAANPYAAAYAPAPAAP-VAPAGGDFSRFGGRGRGGGAGGGGWG 75
Query: 454 RG 459
RG
Sbjct: 76 RG 77
>01_06_0513 - 29944888-29945943
Length = 351
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = -1
Query: 428 SAEPGPTSAFLS*GATPGAAGVRLYADLSSAERAGASGRPTGPRRTVSVRTERLSVAGQF 249
S EP P+S + GA P AA S +G S P RR RT+R + +F
Sbjct: 20 SPEPNPSSPLMDDGAAPAAAAAAELPS-PSPSSSGTSPSPRSKRR----RTDRYAQGFEF 74
>01_05_0305 + 20659199-20660026,20660147-20660179
Length = 286
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +1
Query: 259 ATLKRSVRTETVRRGPVG--RPDAPARSAEDRSAYRRTPAAPGVA 387
A S+ TV GP G +P P + +++RR P+A GV+
Sbjct: 136 AAADSSLSPNTVLHGPYGGNKPPRPLTRSGSTASHRRKPSAVGVS 180
>08_02_0955 + 22994266-22995630
Length = 454
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 434 SRSAEPGPTSAFLS*GATPGAAGVRLYADLSSAERAGASGRPTGPRRT 291
SRS P +A LS +TP +A V A S A A R PRR+
Sbjct: 45 SRSKTPPHNAAVLS--STPASAAVDFVAASDSDAGADADARLASPRRS 90
>06_01_0238 +
1815258-1815581,1816286-1816530,1816612-1816765,
1817043-1817257,1817351-1817468,1817685-1817895,
1818133-1818194,1818306-1818524
Length = 515
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = -1
Query: 371 AGVRLYADLSSAERAGASGRPTGPRRTVSVRTERLSVAGQFQEEG 237
A V L+AD +A R AS R R V++RTE L+ G EEG
Sbjct: 408 AVVALFADGPTAIRDVASWRVKETERMVAIRTE-LTKLGASVEEG 451
>09_03_0062 - 11969719-11970036,11970115-11970843
Length = 348
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 215 QYPHWLGTSKSASRQ 171
Q+PHWLGT+ AS++
Sbjct: 172 QHPHWLGTAGYASKE 186
>02_05_0146 -
26267245-26267339,26267427-26267469,26267589-26267725,
26268172-26268299,26268419-26268495,26268593-26268679,
26268817-26268933,26269115-26269165,26269383-26269497,
26270033-26270292
Length = 369
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 387 CNTRGSRSTSVCRSVLSRAGWGIRTTNRATAYCL 286
C T ++ + + R WG R TNRAT + L
Sbjct: 327 CPTCLCTGMAMANNSIDRRAWGSRLTNRATLHIL 360
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,121,803
Number of Sequences: 37544
Number of extensions: 257643
Number of successful extensions: 932
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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