Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00455
(731 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 153 3e-38
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 132 7e-32
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 123 3e-29
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 121 1e-28
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 119 5e-28
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 113 2e-26
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 103 3e-23
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 103 3e-23
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 96 5e-21
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 88 1e-18
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 83 3e-17
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 83 5e-17
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 79 6e-16
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 77 3e-15
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 75 1e-14
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 74 2e-14
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 72 7e-14
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 72 7e-14
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 72 1e-13
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 65 1e-11
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 43 5e-05
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 32 0.073
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 32 0.073
SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|c... 32 0.097
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 31 0.22
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 30 0.30
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 29 0.90
SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.2
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 28 1.2
SPAC16C9.06c |upf1||ATP-dependent RNA helicase Upf1|Schizosaccha... 28 1.2
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 28 1.2
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 28 1.6
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 27 3.6
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 26 4.8
SPAPYUG7.05 |||delta-1-pyrroline-5-carboxylate reductase |Schizo... 26 4.8
SPAC458.03 |||nuclear telomere cap complex subunit |Schizosaccha... 26 4.8
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 26 4.8
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 25 8.4
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 8.4
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 25 8.4
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 153 bits (370), Expect = 3e-38
Identities = 70/88 (79%), Positives = 81/88 (92%)
Frame = +2
Query: 2 FLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSI 181
FLEA+DQNT IVGSTTGSNY VRILST+DRELLKPSASVAL +HSNALVD+LPPEADSSI
Sbjct: 61 FLEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSI 120
Query: 182 SMLQADEKPDVQYSDIGGMDTQKQELEK 265
SML+ DE+PDV Y+D+GG+D QKQE+ +
Sbjct: 121 SMLRPDERPDVSYADVGGLDVQKQEVRE 148
Score = 153 bits (370), Expect = 3e-38
Identities = 71/88 (80%), Positives = 79/88 (89%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K +REAVELPLT +LYRQIGI+PPRGVL+YGPPG GKTML KAVA+ T A FIRVVGS
Sbjct: 143 KQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGS 202
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EFVQKYLGEGPRMVRDVFR+A+EN+PAI
Sbjct: 203 EFVQKYLGEGPRMVRDVFRMARENAPAI 230
Score = 145 bits (352), Expect = 5e-36
Identities = 71/84 (84%), Positives = 74/84 (88%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + P+ IFIDEIDAIATKRFDAQTGADREVQRIL+ELL QMDGFDQ NVKVIMA
Sbjct: 220 FRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMA 279
Query: 657 TNRADTLDPALLRPGRLDRKIEFP 728
TNRADTLDPALLRPGRLDRKIEFP
Sbjct: 280 TNRADTLDPALLRPGRLDRKIEFP 303
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 132 bits (318), Expect = 7e-32
Identities = 57/85 (67%), Positives = 75/85 (88%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
I+EAVELPLTH ELY ++GI+PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +
Sbjct: 203 IKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELI 262
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
QKYLG+GPR+VR +F A+E+SP+I
Sbjct: 263 QKYLGDGPRLVRQLFNAAEEHSPSI 287
Score = 118 bits (283), Expect = 1e-27
Identities = 55/84 (65%), Positives = 69/84 (82%), Gaps = 1/84 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQT-TNVKVIM 653
F + + PS +FIDEIDAI TKR+DAQ+GA+RE+QR +LELLNQ+DGFD + ++KVIM
Sbjct: 277 FNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIM 336
Query: 654 ATNRADTLDPALLRPGRLDRKIEF 725
ATNR LDPAL+RPGR+DRKI F
Sbjct: 337 ATNRISDLDPALIRPGRIDRKILF 360
Score = 73.7 bits (173), Expect = 2e-14
Identities = 33/86 (38%), Positives = 58/86 (67%)
Frame = +2
Query: 8 EAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISM 187
E +D + IV ST G YYV I+S +D+++L+P SV LH + ++V +L + D I++
Sbjct: 121 EIIDDDHAIV-STAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINV 179
Query: 188 LQADEKPDVQYSDIGGMDTQKQELEK 265
++ D+ P Y+DIGG+++Q QE+++
Sbjct: 180 MKLDKAPTESYADIGGLESQIQEIKE 205
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 123 bits (296), Expect = 3e-29
Identities = 52/85 (61%), Positives = 70/85 (82%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
I+E +ELP+ H EL+ +GI P+G+L+YGPPG GKT+LA+AVAHHT FIRV GSE V
Sbjct: 157 IKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELV 216
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
QKY+GEG RMVR++F +A+E++P+I
Sbjct: 217 QKYIGEGSRMVRELFVMAREHAPSI 241
Score = 113 bits (273), Expect = 2e-26
Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGA-DREVQRILLELLNQMDGFDQTTNVKVIM 653
F + PS IF+DEID+I + R D+ G+ D EVQR +LELLNQ+DGF+ T N+KVIM
Sbjct: 231 FVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIM 290
Query: 654 ATNRADTLDPALLRPGRLDRKIEFP 728
ATNR D LDPALLRPGR+DRKIEFP
Sbjct: 291 ATNRIDILDPALLRPGRIDRKIEFP 315
Score = 52.8 bits (121), Expect = 5e-08
Identities = 25/89 (28%), Positives = 50/89 (56%)
Frame = +2
Query: 5 LEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSIS 184
++ + +N +V Y V I ID + +KP+ VAL S L+ +LP + D +S
Sbjct: 73 IKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVS 132
Query: 185 MLQADEKPDVQYSDIGGMDTQKQELEKLL 271
++ ++ PD Y +GG++ Q +E+++++
Sbjct: 133 LMMVEKIPDSTYEMVGGLEKQIKEIKEVI 161
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 121 bits (291), Expect = 1e-28
Identities = 57/85 (67%), Positives = 66/85 (77%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + + P+ IFIDE+DAI TKRFD++ DREVQR +LELLNQ+DGF VKVI A
Sbjct: 271 FALAKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAA 330
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR DTLDPALLR GRLDRK+EFPL
Sbjct: 331 TNRVDTLDPALLRSGRLDRKLEFPL 355
Score = 99 bits (238), Expect = 3e-22
Identities = 40/83 (48%), Positives = 62/83 (74%)
Frame = +1
Query: 262 EAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK 441
EA+ LP+ + +R++G++PP+G LM+GPPG GKT+LA+A A + A F+++ + VQ
Sbjct: 199 EAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQM 258
Query: 442 YLGEGPRMVRDVFRLAKENSPAI 510
++G+G ++VRD F LAKE SPAI
Sbjct: 259 FIGDGAKLVRDAFALAKEKSPAI 281
Score = 60.5 bits (140), Expect = 2e-10
Identities = 25/78 (32%), Positives = 47/78 (60%)
Frame = +2
Query: 26 TGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEK 205
+ ++ ++T ++ ++ ++ E L P + ++K S ++D LP E DS + ++ DEK
Sbjct: 120 SAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEK 179
Query: 206 PDVQYSDIGGMDTQKQEL 259
P +YSDIGG+ Q +EL
Sbjct: 180 PTERYSDIGGLSKQIEEL 197
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 119 bits (286), Expect = 5e-28
Identities = 57/85 (67%), Positives = 64/85 (75%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + +P IF+DEIDAI +RF T ADRE+QR L+ELLNQMDGFD K+IMA
Sbjct: 218 FGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMA 277
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR DTLDPALLRPGRLDRKIE PL
Sbjct: 278 TNRPDTLDPALLRPGRLDRKIEIPL 302
Score = 103 bits (248), Expect = 2e-23
Identities = 44/85 (51%), Positives = 64/85 (75%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
+RE +ELPL + EL+ ++GI+PP+GVL+YGPPG GKT+LA+AVA F++VV S V
Sbjct: 144 LREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIV 203
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
KY+GE R++R++F AKE+ P +
Sbjct: 204 DKYIGESARIIREMFGYAKEHEPCV 228
Score = 46.0 bits (104), Expect = 6e-06
Identities = 21/89 (23%), Positives = 48/89 (53%)
Frame = +2
Query: 5 LEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSIS 184
L+ +D IV +++G Y V + +D+ L V+L + ++ +LP E D +
Sbjct: 60 LKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVY 119
Query: 185 MLQADEKPDVQYSDIGGMDTQKQELEKLL 271
+ ++ D+ ++ +GG++ Q +EL +++
Sbjct: 120 NMSIEDPGDISFAGVGGLNEQIRELREVI 148
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 113 bits (273), Expect = 2e-26
Identities = 49/86 (56%), Positives = 67/86 (77%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF 432
R+RE VELPL E + ++GI+PP+G+++YGPPG GKT+ A+AVA+ T A FIRV+GSE
Sbjct: 190 RLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSEL 249
Query: 433 VQKYLGEGPRMVRDVFRLAKENSPAI 510
VQKY+GEG RMVR++F +A+ I
Sbjct: 250 VQKYVGEGARMVRELFEMARTKKACI 275
Score = 102 bits (244), Expect = 6e-23
Identities = 47/74 (63%), Positives = 56/74 (75%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 689
IF DEIDAI RFD G D EVQR +LEL+ Q+DGFD N+KV+ ATNR +TLD AL
Sbjct: 276 IFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEAL 335
Query: 690 LRPGRLDRKIEFPL 731
+RPGR+DRK+EF L
Sbjct: 336 MRPGRIDRKVEFGL 349
Score = 50.0 bits (114), Expect = 3e-07
Identities = 22/88 (25%), Positives = 47/88 (53%)
Frame = +2
Query: 8 EAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISM 187
++ ++N ++ + + V + + ++ V ++ A+ LPP+ D S++M
Sbjct: 108 QSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTM 167
Query: 188 LQADEKPDVQYSDIGGMDTQKQELEKLL 271
+Q +EKPDV Y D+GG Q + L +++
Sbjct: 168 MQVEEKPDVTYGDVGGCKEQIERLREVV 195
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 103 bits (246), Expect = 3e-23
Identities = 44/88 (50%), Positives = 63/88 (71%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K +++E+VE PLTH E + ++G+ PP+GVL+YGPPGC KT+ AKA+A T FI V G
Sbjct: 557 KQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGP 616
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E K++GE R VR VF+ A++ SP++
Sbjct: 617 ELFDKFVGESERAVRQVFQKARQASPSV 644
Score = 84.2 bits (199), Expect = 2e-17
Identities = 40/86 (46%), Positives = 54/86 (62%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF 432
+IR+ VELP + EL++ I PPRGVL+YGPPG GKTM+ +AVA A + G
Sbjct: 290 QIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSV 349
Query: 433 VQKYLGEGPRMVRDVFRLAKENSPAI 510
V KYLGE +R +F A+ + P+I
Sbjct: 350 VGKYLGETESRLRKIFEDARAHQPSI 375
Score = 77.0 bits (181), Expect = 3e-15
Identities = 38/79 (48%), Positives = 49/79 (62%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F ++ PS IF DEIDA+ R G D R++ LLN++DG + NV V+ A
Sbjct: 634 FQKARQASPSVIFFDEIDALTANR-----GEDNSSDRVVAALLNELDGIEALRNVLVLAA 688
Query: 657 TNRADTLDPALLRPGRLDR 713
TNR D +DPAL+RPGRLDR
Sbjct: 689 TNRPDMIDPALMRPGRLDR 707
Score = 68.5 bits (160), Expect = 9e-13
Identities = 38/82 (46%), Positives = 51/82 (62%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + QPS IFIDEIDA+A KR + + A+ R + LL +DG V VI A
Sbjct: 365 FEDARAHQPSIIFIDEIDALAPKRTEDVSEAE---SRAVATLLTLLDGMANAGKVVVIAA 421
Query: 657 TNRADTLDPALLRPGRLDRKIE 722
TNR +++D AL RPGRL+++IE
Sbjct: 422 TNRPNSIDEALRRPGRLEKEIE 443
Score = 31.5 bits (68), Expect = 0.13
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +2
Query: 200 EKPDVQYSDIGGMDTQKQELEKLLNSLSLMWSCTGKLVLSLLGV 331
E P+V +SDIGG + KQ+L++ S+ W T S LGV
Sbjct: 541 ESPNVHWSDIGGQEEVKQKLKE-----SVEWPLTHGETFSRLGV 579
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 103 bits (246), Expect = 3e-23
Identities = 47/86 (54%), Positives = 62/86 (72%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF 432
+IRE VELPL H +L++ IGI+PPRG+LMYGPPG GKT++A+AVA+ T A F + G E
Sbjct: 235 QIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEI 294
Query: 433 VQKYLGEGPRMVRDVFRLAKENSPAI 510
+ K GE +R F A++NSPAI
Sbjct: 295 MSKMAGESESNLRKAFEEAEKNSPAI 320
Score = 86.6 bits (205), Expect = 3e-18
Identities = 37/88 (42%), Positives = 57/88 (64%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K +RE V++P+ + E + + G+ P +GVL +GPPG GKT+LAKA+A+ +A FI V G
Sbjct: 506 KRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGP 565
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + + GE VRD+F A+ +P +
Sbjct: 566 ELLSMWFGESESNVRDIFDKARAAAPCV 593
Score = 74.1 bits (174), Expect = 2e-14
Identities = 39/85 (45%), Positives = 52/85 (61%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + P +F+DE+D+IA R A G R++ +LL +MDG + NV VI A
Sbjct: 583 FDKARAAAPCVVFLDELDSIAKAR-GASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGA 641
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR D +DPAL+RPGRLD+ I PL
Sbjct: 642 TNRPDQIDPALMRPGRLDQLIYVPL 666
Score = 70.5 bits (165), Expect = 2e-13
Identities = 37/82 (45%), Positives = 55/82 (67%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F ++ P+ IFIDEID+IA KR +T + E +R++ +LL MDG +NV V+ A
Sbjct: 310 FEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-RRVVSQLLTLMDGMKARSNVVVMAA 366
Query: 657 TNRADTLDPALLRPGRLDRKIE 722
TNR +++DPAL R GR DR+++
Sbjct: 367 TNRPNSIDPALRRFGRFDREVD 388
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 200 EKPDVQYSDIGGMDTQKQELEK 265
E P+V++ DIGG++ K+EL +
Sbjct: 490 EVPNVRWEDIGGLEEVKRELRE 511
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 95.9 bits (228), Expect = 5e-21
Identities = 42/88 (47%), Positives = 60/88 (68%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
+ ++ A+ P+ ELY+ +GI P GVL++GPPGCGKT+LAKAVA+ + A FI + G
Sbjct: 501 RVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGP 560
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + KY+GE R VR VF A+ +SP +
Sbjct: 561 ELLNKYVGESERAVRQVFLRARASSPCV 588
Score = 86.6 bits (205), Expect = 3e-18
Identities = 39/83 (46%), Positives = 52/83 (62%)
Frame = +1
Query: 262 EAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK 441
E V +P+ H E+Y+ GI PPRGVL++GPPGCGKTMLA A+A+ FI + V
Sbjct: 188 ELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSG 247
Query: 442 YLGEGPRMVRDVFRLAKENSPAI 510
GE + VR+VF AK +P +
Sbjct: 248 MSGESEKKVREVFEEAKSLAPCL 270
Score = 67.3 bits (157), Expect = 2e-12
Identities = 34/81 (41%), Positives = 49/81 (60%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + P IF DE+DA+ +R D+ + A R++ LL ++DG + V VI A
Sbjct: 578 FLRARASSPCVIFFDELDAMVPRRDDSLSEAS---SRVVNTLLTELDGLSDRSGVYVIAA 634
Query: 657 TNRADTLDPALLRPGRLDRKI 719
TNR D +DPA+LRPGRLD+ +
Sbjct: 635 TNRPDIIDPAMLRPGRLDKTL 655
Score = 58.0 bits (134), Expect = 1e-09
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTN--VKVIMATNRADT 674
P +FIDEIDA+ KR AQ +R + L ++++ F++T V VI ATNR D+
Sbjct: 268 PCLMFIDEIDAVTPKRESAQREMERRIVAQFLTCMDELS-FEKTDGKPVLVIGATNRPDS 326
Query: 675 LDPALLRPGRLDRKI 719
LD AL R GR DR+I
Sbjct: 327 LDSALRRAGRFDREI 341
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 87.8 bits (208), Expect = 1e-18
Identities = 41/88 (46%), Positives = 59/88 (67%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
KT +R+ ++LPL EL+ Q G++P GVL+YGPPG GKT+LAKAVA + F+ + G
Sbjct: 664 KTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGP 722
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + Y+GE VR+VF A+ +SP +
Sbjct: 723 ELLNMYVGESEANVRNVFEKARNSSPCV 750
Score = 61.3 bits (142), Expect = 1e-10
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTN--VKVI 650
F + P IF DE+D+IA R ++ + + R++ +LL ++D + N V VI
Sbjct: 740 FEKARNSSPCVIFFDELDSIAPHRGNSSDSGN-VMDRVVSQLLAELDSISKDNNKYVFVI 798
Query: 651 MATNRADTLDPALLRPGRLDRKI 719
ATNR D LDP+LLRPGR D+ +
Sbjct: 799 GATNRPDLLDPSLLRPGRFDKLV 821
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 83.4 bits (197), Expect = 3e-17
Identities = 39/88 (44%), Positives = 57/88 (64%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K I E V+ L + + Y ++G + PRG ++ GPPG GKT+LAKA A F+ V GS
Sbjct: 305 KEEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGS 363
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EF++ ++G GP VRD+F A++N+P I
Sbjct: 364 EFLEMFVGVGPSRVRDLFATARKNAPCI 391
Score = 75.8 bits (178), Expect = 6e-15
Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRF-DAQTGADREVQRILLELLNQMDGFDQTTNVKVIM 653
F + ++ P IFIDEIDAI R Q G++ E + L +LL +MDGF + ++ V
Sbjct: 381 FATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFA 440
Query: 654 ATNRADTLDPALLRPGRLDRKI 719
TNR D LDPALLRPGR DR+I
Sbjct: 441 GTNRPDVLDPALLRPGRFDRQI 462
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 82.6 bits (195), Expect = 5e-17
Identities = 39/90 (43%), Positives = 59/90 (65%)
Frame = +1
Query: 241 YTKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVV 420
+ K ++EAV P +L++ + EP RG+L++GPPG GKTMLA+AVA + + F +
Sbjct: 466 FAKHSLKEAVVYPFLRPDLFQGLR-EPARGMLLFGPPGTGKTMLARAVATESRSVFFSIS 524
Query: 421 GSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
S K+LGE ++VR +F LAK+ SP+I
Sbjct: 525 ASSLTSKFLGESEKLVRALFTLAKKLSPSI 554
Score = 27.9 bits (59), Expect = 1.6
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREV-QRILLELLNQMDGF------DQTT 635
F ++ PS IF+DEID++ + R + G + E +RI E L Q QT
Sbjct: 544 FTLAKKLSPSIIFVDEIDSLLSAR--SSDGNEHETSRRIKTEFLIQWSSLARAAASRQTA 601
Query: 636 N---VKVIMATNRADTLDPALLRPGRLDRKIEFPL 731
+ V V+ ATN +D A R R R+ PL
Sbjct: 602 DHPRVLVLAATNLPWCIDDAARR--RFVRRTYIPL 634
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 79.0 bits (186), Expect = 6e-16
Identities = 37/88 (42%), Positives = 56/88 (63%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++E V LP+ +L+ G +P G+L+YGPPG GK+ LAKAVA + F + S
Sbjct: 138 KEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLAKAVATEAGSTFFSISSS 196
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
+ V K++GE R+VR +F +A+E P+I
Sbjct: 197 DLVSKWMGESERLVRQLFEMAREQKPSI 224
Score = 48.8 bits (111), Expect = 8e-07
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ-TTNVKVIM 653
F + ++PS IFIDEID++ R + ++ + R RI E L QM+G + + V V+
Sbjct: 214 FEMAREQKPSIIFIDEIDSLCGSRSEGESESSR---RIKTEFLVQMNGVGKDESGVLVLG 270
Query: 654 ATNRADTLDPALLRPGRLDRKIEFPL 731
ATN TLD A+ R R +++I PL
Sbjct: 271 ATNIPWTLDSAIRR--RFEKRIYIPL 294
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 76.6 bits (180), Expect = 3e-15
Identities = 36/88 (40%), Positives = 55/88 (62%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++EAV P EL++ + EP +G+L++GPPG GKTMLA+AVA A F + S
Sbjct: 388 KNSLKEAVIYPFLRPELFQGLR-EPVQGMLLFGPPGTGKTMLARAVATEAKATFFSISAS 446
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
KYLG+ ++VR +F +AK + ++
Sbjct: 447 SLTSKYLGDSEKLVRALFEVAKRQTCSV 474
Score = 27.1 bits (57), Expect = 2.8
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADRE-VQRILLELLNQMDGF-----DQTT- 635
F +R+ S IF+DEID+I + R D +G + E +R+ E L Q D+ T
Sbjct: 464 FEVAKRQTCSVIFVDEIDSILSARND--SGNEHESSRRLKTEFLIQWSSLTNAAPDKQTG 521
Query: 636 ---NVKVIMATNRADTLDPALLRPGRLDRKIEFPL 731
V V+ ATN +D A R R ++ PL
Sbjct: 522 HSPRVLVLAATNLPWCIDEAARR--RFVKRTYIPL 554
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 74.9 bits (176), Expect = 1e-14
Identities = 32/88 (36%), Positives = 53/88 (60%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K +R+ +E P+ + +Y+Q + P G+L++G PGCGKT LA A++ FI + G
Sbjct: 615 KEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPVQFISIKGP 674
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + KY+G+ + VRD+F A+ P +
Sbjct: 675 ELLDKYIGKSEQGVRDLFSRAQMAKPCV 702
Score = 69.7 bits (163), Expect = 4e-13
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F Q +P +F DE D++A +R TG R++ ++L QMDG + V ++ A
Sbjct: 692 FSRAQMAKPCVLFFDEFDSVAPRRGQDSTGV---TDRVVNQILTQMDGAESLDGVYIVAA 748
Query: 657 TNRADTLDPALLRPGRLDRKI 719
T R D +DPALLRPGRLD+ I
Sbjct: 749 TTRPDMIDPALLRPGRLDKLI 769
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 73.7 bits (173), Expect = 2e-14
Identities = 34/91 (37%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVA-----HHTTAAFIRV 417
+++E V LPL + E++++ ++PPRGVL +GPPG GKT++A+A+A + +F
Sbjct: 277 QLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMR 336
Query: 418 VGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
G++ + K++GE R +R +F AK P+I
Sbjct: 337 KGADCLSKWVGEAERQLRLLFEEAKSTQPSI 367
Score = 69.3 bits (162), Expect = 5e-13
Identities = 39/85 (45%), Positives = 46/85 (54%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + QPS IF DEID +A R Q + LL L MDG + V +I A
Sbjct: 357 FEEAKSTQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLAL---MDGMESRGQVIIIGA 413
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR D +DPAL RPGR DR+ FPL
Sbjct: 414 TNRPDAVDPALRRPGRFDREFYFPL 438
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 72.1 bits (169), Expect = 7e-14
Identities = 42/85 (49%), Positives = 47/85 (55%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F +R QPS IF DEID +A R Q + LL L MDG D V VI A
Sbjct: 463 FEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTLLAL---MDGLDTRGQVVVIGA 519
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR + LDPAL RPGR DR+ FPL
Sbjct: 520 TNRPNDLDPALRRPGRFDREFYFPL 544
Score = 68.9 bits (161), Expect = 7e-13
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTA-----AFIRV 417
+++E V LPL + E++ + I PPRGVL +GPPG GKT++A+ +A + + +F
Sbjct: 383 QLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLR 442
Query: 418 VGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
GS+ + K++GE R +R +F A+ P+I
Sbjct: 443 KGSDCLSKWVGEAERQLRLLFEEARRVQPSI 473
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 72.1 bits (169), Expect = 7e-14
Identities = 36/88 (40%), Positives = 55/88 (62%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + E V+ L + ++G + PRGVL+ GPPG GKTMLA+AVA F + GS
Sbjct: 276 KEELEEIVDF-LRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGS 334
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
+F + Y+G G + VR++F A++ +P+I
Sbjct: 335 QFDEMYVGVGAKRVRELFAAARKQAPSI 362
Score = 65.7 bits (153), Expect = 6e-12
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTN----VK 644
F + +++ PS IFIDE+DAI KR +A+ A +++ L +LL +DGF + + V
Sbjct: 352 FAAARKQAPSIIFIDELDAIGQKR-NARDAA--HMRQTLNQLLVDLDGFSKNEDLAHPVV 408
Query: 645 VIMATNRADTLDPALLRPGRLDRKIEFPL 731
I ATN ++LDPAL RPGR DR I PL
Sbjct: 409 FIGATNFPESLDPALTRPGRFDRHIHVPL 437
Score = 27.9 bits (59), Expect = 1.6
Identities = 10/24 (41%), Positives = 20/24 (83%)
Frame = +2
Query: 209 DVQYSDIGGMDTQKQELEKLLNSL 280
+V++SD+ G+D K+ELE++++ L
Sbjct: 263 NVRFSDVQGVDEAKEELEEIVDFL 286
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 71.7 bits (168), Expect = 1e-13
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIG--IEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
++ + V PL + E++ G + P+G+L+YGPPGCGKTMLAKA+A + A FI V
Sbjct: 100 QLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALAKQSQATFINVSVG 159
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
K+ GE ++V +F LA++ P I
Sbjct: 160 LLTDKWFGESNKLVDALFTLARKLEPTI 187
Score = 36.3 bits (80), Expect = 0.005
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDG-FDQTTNVKVIM 653
F ++ +P+ IFIDEID +R Q + +I E ++ DG + V V+
Sbjct: 177 FTLARKLEPTIIFIDEIDTFLRQR---QRTDHEAMAQIKAEFMSMWDGLLSGQSRVLVLG 233
Query: 654 ATNRADTLDPALLRPGRLDRKIEFPL 731
ATNR +D A+ R R+ + PL
Sbjct: 234 ATNRPADIDEAIRR--RMPKVFSIPL 257
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 64.9 bits (151), Expect = 1e-11
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREV-QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPA 686
I DE+DAI KR +G D V +++ +LL +MDG DQ N+ VI TNR D +D A
Sbjct: 376 IIFDELDAICKKR--GSSGGDTGVGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEA 433
Query: 687 LLRPGRLDRKIEFPL 731
LLRPGRL+ +E L
Sbjct: 434 LLRPGRLEVHMEISL 448
Score = 53.2 bits (122), Expect = 4e-08
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +1
Query: 295 LYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVV-GSEFVQKYLGEGPRMVR 471
+ ++GI +G+L+YGPPG GKT++A+ + A ++V G E + KY+G+ VR
Sbjct: 295 MVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILNKYVGQSEENVR 354
Query: 472 DVF 480
+F
Sbjct: 355 KLF 357
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 42.7 bits (96), Expect = 5e-05
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 600 LLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRK 716
LLN +DG + + M TN + LDPAL+RPGR+D K
Sbjct: 327 LLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVDVK 365
Score = 35.5 bits (78), Expect = 0.008
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVA 387
K I + V L + + Y GI RG L+YGPPG GKT A+A
Sbjct: 217 KKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALA 263
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 32.3 bits (70), Expect = 0.073
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +1
Query: 316 EPPRGVLMYGPPGCGKTMLAKAVA---HHTTAAFIRVVGSEFVQKY 444
+P L GP G GKT+L KA+A A IR+ SE+++K+
Sbjct: 612 QPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKH 657
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 32.3 bits (70), Expect = 0.073
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +1
Query: 319 PPRGVLMYGPPGCGKTMLAKAVAH---HTTAAFIRVVGSEFVQKY 444
P L GP G GKT L KA+A T A IR SEF +K+
Sbjct: 531 PLASFLFLGPTGVGKTALTKALAEFLFDTDKAMIRFDMSEFQEKH 575
>SPBC1271.10c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 581
Score = 31.9 bits (69), Expect = 0.097
Identities = 21/74 (28%), Positives = 36/74 (48%)
Frame = +2
Query: 62 YVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMD 241
+V L T + +A++ K D L + D + +Q+D KPDV+ SD MD
Sbjct: 227 FVLFLFTFEETTFDRAAAID-RKQIQISNDQLTVKEDFDLKDMQSDIKPDVEKSD--AMD 283
Query: 242 TQKQELEKLLNSLS 283
K +++ +N +S
Sbjct: 284 DSKMKVDYTVNEIS 297
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 30.7 bits (66), Expect = 0.22
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 322 PRGVLMYGPPGCGKTMLAKAVAHH 393
P+G+ +YG GCGKT L H+
Sbjct: 118 PKGIYLYGDVGCGKTALMDLFYHN 141
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 30.3 bits (65), Expect = 0.30
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF--VQKYLG 450
+L+ GP GKT + + VA T F+R+ E +Q+Y+G
Sbjct: 897 ILIQGPTSSGKTSMIEYVAKKTGHKFVRINNHEHTDLQEYIG 938
Score = 28.7 bits (61), Expect = 0.90
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVAHHTTAAFIRV 417
+L+ G PG GKT L A+A T +R+
Sbjct: 1562 ILLEGSPGVGKTSLITALARETGHQLVRI 1590
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 28.7 bits (61), Expect = 0.90
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 325 RGVLMYGPPGCGKTMLAKAVAHH--TTAAFIRVVGSE 429
+GVL G G GKT LA A+A F +VGSE
Sbjct: 65 KGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSE 101
>SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 608
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 101 KPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQY-SDIGGMDTQKQEL 259
KPS++V+ S+A DV+ + S+I+ D K DV + + D Q +E+
Sbjct: 244 KPSSNVSRGTPSSAHSDVIEISSSSAIARTSGDRKDDVLFDTSTQRRDNQTREM 297
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 337 MYGPPGCGKTMLAKAVAHHTTAAFIR 414
+ GPPG GKT + K++A F R
Sbjct: 576 LVGPPGVGKTSVGKSIASALNREFFR 601
>SPAC16C9.06c |upf1||ATP-dependent RNA helicase
Upf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 28.3 bits (60), Expect = 1.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 334 LMYGPPGCGKTMLAKAVAHH 393
L+ GPPG GKT+ + +V +H
Sbjct: 411 LIQGPPGTGKTVTSASVVYH 430
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 325 RGVLMYGPPGCGKTMLAKAVAHH--TTAAFIRVVGSE 429
R +LM GPP GKT +A +A + F+ + SE
Sbjct: 66 RAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASE 102
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 325 RGVLMYGPPGCGKTMLAKAVA 387
+ VL+ GPPG GKT A VA
Sbjct: 410 KAVLLSGPPGIGKTTAAHLVA 430
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 26.6 bits (56), Expect = 3.6
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 319 PPRGVLMYGPPGCGKTMLAKAV 384
PP V + GPPG GK+ L K++
Sbjct: 73 PPVIVAVMGPPGTGKSTLIKSL 94
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVAHHT 396
+++ G PG GKT LA+ VA T
Sbjct: 11 IIICGTPGTGKTTLAEQVAETT 32
>SPAPYUG7.05 |||delta-1-pyrroline-5-carboxylate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 26.2 bits (55), Expect = 4.8
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +2
Query: 83 IDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQ-YSDIGGMDTQKQEL 259
+ E++ P+ A K DV D ++ A E ++ S++ + + Q
Sbjct: 31 VSDEIIIPNKFYACVKFPKEKEDVQKLFGDRVKVVMGAKENAEMAAISNVLLLSCKPQAA 90
Query: 260 EKLLNSLSLMWSCTGKLVLSLL 325
E +LNS + + GKL+LS+L
Sbjct: 91 EDVLNSPKMKEALKGKLILSIL 112
>SPAC458.03 |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 868
Score = 26.2 bits (55), Expect = 4.8
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 200 EKPDVQYSDIGGMDTQKQELEKLLNSLSLMWS 295
++ +V S I ++ K+ELEK ++SL +WS
Sbjct: 301 KRVEVVCSSISYKESDKKELEKTVDSLFNIWS 332
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 26.2 bits (55), Expect = 4.8
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVA 387
+L YGPPG GKT A A
Sbjct: 59 MLFYGPPGTGKTSTILACA 77
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 25.4 bits (53), Expect = 8.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 730 SGNSIFLSRRPGLSNAGSNVSARFVAIITLT 638
S I +RPG S+ G+ + +FV +T+T
Sbjct: 450 SKEQIASPKRPGPSDNGNEIPTKFVQKVTIT 480
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 8.4
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +2
Query: 17 DQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQA 196
D+NT + SN + I ELL PS A+ +SN D+ P SS + A
Sbjct: 14 DENTDALFKLHTSNRKSANMFGIKSELLNPSELSAVGSYSN---DICPNRQSSSST--AA 68
Query: 197 DEKPDVQYSD 226
D P S+
Sbjct: 69 DTSPSTNASN 78
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 25.4 bits (53), Expect = 8.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 334 LMYGPPGCGKTMLAKAVA 387
++ GP G GKT +AKAV+
Sbjct: 18 VVIGPAGSGKTTMAKAVS 35
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,001,997
Number of Sequences: 5004
Number of extensions: 60989
Number of successful extensions: 288
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 345237368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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