Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00455
(731 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 175 2e-44
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 1e-26
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 114 6e-26
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 3e-22
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 88 8e-18
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 84 1e-16
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 83 2e-16
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 82 4e-16
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 75 6e-14
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 8e-14
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 69 3e-12
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 69 5e-12
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 68 7e-12
SB_732| Best HMM Match : AAA (HMM E-Value=0) 64 1e-10
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 56 2e-08
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 54 1e-07
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 51 1e-06
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 42 5e-04
SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10) 37 0.015
SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0) 33 0.18
SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_27422| Best HMM Match : Dynamin_N (HMM E-Value=3) 31 0.96
SB_48094| Best HMM Match : MMR_HSR1 (HMM E-Value=0.82) 31 1.3
SB_20945| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_11032| Best HMM Match : AAA (HMM E-Value=3.5) 31 1.3
SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_34887| Best HMM Match : Ribosomal_L30_N (HMM E-Value=0.95) 30 1.7
SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05) 30 1.7
SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8) 30 2.2
SB_11522| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11) 29 2.9
SB_55513| Best HMM Match : Pox_A32 (HMM E-Value=0.056) 29 3.9
SB_7001| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12) 28 6.8
SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0) 28 6.8
SB_22344| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_36893| Best HMM Match : Fibrinogen_C (HMM E-Value=2.4e-24) 28 9.0
SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_21151| Best HMM Match : AAA_2 (HMM E-Value=0) 28 9.0
SB_33872| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_8338| Best HMM Match : PA (HMM E-Value=5.7e-10) 28 9.0
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 175 bits (427), Expect = 2e-44
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K IREAVELPLTH ELY+QIGI+PPRGVL+YGPPGCGKTMLAKAVAHHTTAAFIRVVGS
Sbjct: 173 KQEIREAVELPLTHFELYKQIGIDPPRGVLLYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 232
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EFVQKYLGEGPRMVRDVFRLAKEN+PAI
Sbjct: 233 EFVQKYLGEGPRMVRDVFRLAKENAPAI 260
Score = 155 bits (377), Expect = 3e-38
Identities = 73/88 (82%), Positives = 82/88 (93%)
Frame = +2
Query: 2 FLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSI 181
FLEAVDQNTGIV STTGSNYYVRILSTID+ELLKPSASVALHKHSNALVD+LPPEADSSI
Sbjct: 91 FLEAVDQNTGIVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILPPEADSSI 150
Query: 182 SMLQADEKPDVQYSDIGGMDTQKQELEK 265
+ML +EKP+V Y++IGGMD QKQE+ +
Sbjct: 151 AMLTNEEKPNVSYAEIGGMDIQKQEIRE 178
Score = 149 bits (360), Expect = 3e-36
Identities = 73/85 (85%), Positives = 75/85 (88%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + P+ IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ NVKVIMA
Sbjct: 250 FRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMA 309
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR DTLDPALLRPGRLDRKIEFPL
Sbjct: 310 TNRQDTLDPALLRPGRLDRKIEFPL 334
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 116 bits (280), Expect = 1e-26
Identities = 55/84 (65%), Positives = 65/84 (77%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + + P+ IFIDE+DAI TKRFD++ DREVQR +LELLNQ+DGF ++KVI A
Sbjct: 179 FALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSHHDIKVIAA 238
Query: 657 TNRADTLDPALLRPGRLDRKIEFP 728
TNR D LDPALLR GRLDRKIEFP
Sbjct: 239 TNRVDILDPALLRSGRLDRKIEFP 262
Score = 64.9 bits (151), Expect = 6e-11
Identities = 27/76 (35%), Positives = 48/76 (63%)
Frame = +2
Query: 32 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPD 211
++ ++T Y++ ++ ++ E L P V ++K S +++ LP E DS + ++ DE+P
Sbjct: 91 VIKTSTRQTYFLPVIGLVEPENLTPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPT 150
Query: 212 VQYSDIGGMDTQKQEL 259
QYSDIGG+D Q QE+
Sbjct: 151 EQYSDIGGLDQQIQEM 166
Score = 35.1 bits (77), Expect = 0.059
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
+ ++G+G ++VRD F LAKE +PAI
Sbjct: 165 EMFIGDGAKLVRDAFALAKEKAPAI 189
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 116 bits (280), Expect = 1e-26
Identities = 52/88 (59%), Positives = 70/88 (79%), Gaps = 2/88 (2%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
I+E +ELP+ H EL+ +GI+ P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE V
Sbjct: 189 IKEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 248
Query: 436 QKYLGEGPRMVRDVFRLAK--ENSPAIF 513
QK++GEG RMVR++F +A+ EN A++
Sbjct: 249 QKFIGEGARMVRELFVMARHGENLQAMY 276
Score = 114 bits (274), Expect = 8e-26
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + PS IF+DEID+I + R + +G D EVQR +LELLNQ+DGF+ T N+KVIMA
Sbjct: 277 FVDSREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 336
Query: 657 TNRADTLDPALLRPGRLDRKIEFP 728
TNR D LD ALLRPGR+DRKIEFP
Sbjct: 337 TNRIDILDSALLRPGRIDRKIEFP 360
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 114 bits (275), Expect = 6e-26
Identities = 50/86 (58%), Positives = 66/86 (76%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF 432
++RE VE PL H E + +GIEPP+GVL++GPPG GKT+ A+AVA+ T A FIRV+GSE
Sbjct: 95 KLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSEL 154
Query: 433 VQKYLGEGPRMVRDVFRLAKENSPAI 510
VQKY+GEG RMVR++F +A+ I
Sbjct: 155 VQKYVGEGARMVRELFEMARTKKACI 180
Score = 112 bits (269), Expect = 3e-25
Identities = 51/74 (68%), Positives = 59/74 (79%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 689
+F DEIDAI RFD G D EVQR +LEL+NQ+DGFD N+KV+MATNR DTLDPAL
Sbjct: 181 VFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL 240
Query: 690 LRPGRLDRKIEFPL 731
+RPGRLDRK+EF L
Sbjct: 241 MRPGRLDRKVEFGL 254
Score = 48.0 bits (109), Expect = 8e-06
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +2
Query: 155 LPPEADSSISMLQADEKPDVQYSDIGGMDTQKQELEKLLNS 277
LPP+ D +++M+Q +EKPDV YSDIGG Q +L +++ +
Sbjct: 62 LPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVET 102
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 102 bits (245), Expect = 3e-22
Identities = 44/64 (68%), Positives = 57/64 (89%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
I+E+VELPLTH ELY ++GI+PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +
Sbjct: 392 IKESVELPLTHPELYEEMGIKPPKGVILYGQPGTGKTLLAKAVANQTSATFLRVVGSELI 451
Query: 436 QKYL 447
QKYL
Sbjct: 452 QKYL 455
Score = 81.0 bits (191), Expect = 9e-16
Identities = 35/86 (40%), Positives = 60/86 (69%)
Frame = +2
Query: 8 EAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISM 187
E +D N IV ++ GS +YV ILS +D++LL+P +V L+ +A+V VL +AD +++
Sbjct: 309 EIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCTVLLNHKVHAVVGVLSDDADPMVTV 368
Query: 188 LQADEKPDVQYSDIGGMDTQKQELEK 265
++ ++ P Y+DIGG+DTQ QE+++
Sbjct: 369 MKLEKAPQESYADIGGLDTQIQEIKE 394
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 99 bits (238), Expect = 2e-21
Identities = 42/88 (47%), Positives = 63/88 (71%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K +++EAVE PL H E ++++GI PPRG+LMYGPPGC KT++A+A+A + FI + G
Sbjct: 546 KRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIARALATESGLNFIAIKGP 605
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E K++GE + VR+VF A+ +P+I
Sbjct: 606 ELFSKWVGESEKAVREVFLKARATAPSI 633
Score = 91.1 bits (216), Expect = 9e-19
Identities = 39/85 (45%), Positives = 58/85 (68%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
+RE +E+PLT+ EL+ G+ PPRG+L+YGP G GKTM+A+AVA+ T F + G E +
Sbjct: 268 VREMIEMPLTNPELFTAYGVPPPRGILLYGPSGTGKTMIARAVANETGVHFFCINGPEVL 327
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
+Y GE +R++F A+ SP+I
Sbjct: 328 SRYYGETEARLREIFTEAQNKSPSI 352
Score = 75.4 bits (177), Expect = 5e-14
Identities = 39/82 (47%), Positives = 49/82 (59%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F Q + PS +FIDE+DA+ +R Q +R V LL L++ M T V V+ A
Sbjct: 342 FTEAQNKSPSIVFIDELDALCPRRDKVQNEFERRVVATLLTLMDGMHMKSTDTYVMVLAA 401
Query: 657 TNRADTLDPALLRPGRLDRKIE 722
TNR D LDPAL RPGR DR+IE
Sbjct: 402 TNRPDALDPALRRPGRFDREIE 423
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLD 680
PS +F DE+DAIA +R TG R+L +LL ++DG + +V I ATNR D +D
Sbjct: 631 PSIVFFDELDAIAGQR--NSTGGSDVNDRVLTQLLTELDGVETLKDVIFIAATNRPDMID 688
Query: 681 PALLRPGRLDRKIEFPL 731
AL+RPGR+DR I PL
Sbjct: 689 KALMRPGRVDRLIYVPL 705
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 87.8 bits (208), Expect = 8e-18
Identities = 38/88 (43%), Positives = 56/88 (63%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++E V+ P+ H + + + G+ P +GVL YGPPGCGKT+LAKA+A+ A FI + G
Sbjct: 319 KRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 378
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + + GE VRDVF A+ +P +
Sbjct: 379 ELLTMWFGESEANVRDVFDKARSAAPCV 406
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/85 (41%), Positives = 49/85 (57%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + P +F DE+D+IA R R++ ++L +MDG + NV +I A
Sbjct: 396 FDKARSAAPCVLFFDELDSIAKSRGGNVGDGGGAADRVINQVLTEMDGMNVKKNVFIIGA 455
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR D +DPA+LRPGRLD+ I PL
Sbjct: 456 TNRPDIIDPAILRPGRLDQLIYIPL 480
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/47 (46%), Positives = 34/47 (72%)
Frame = +3
Query: 582 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIE 722
+RI+ +LL MDG Q ++V V+ ATNR +++D AL R GR DR+++
Sbjct: 179 RRIVSQLLTLMDGLKQRSHVIVMAATNRPNSVDVALRRFGRFDREVD 225
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +2
Query: 200 EKPDVQYSDIGGMDTQKQELEKLL 271
E P+V + DIGG++ K+EL++L+
Sbjct: 303 EVPNVSWDDIGGLEGVKRELQELV 326
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/88 (40%), Positives = 56/88 (63%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K +R+A+E PL H E + ++G+ PRGVL+YGPPGC KT L +A A T F+ + +
Sbjct: 22 KQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCA 81
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
+ Y+G+ R +R++F A+ +PAI
Sbjct: 82 QLFSSYVGDAERTLRELFLKARATAPAI 109
Score = 36.7 bits (81), Expect = 0.019
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +3
Query: 522 EIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPG 701
EI K+ D + +D ++ L+++ D ++ ++ ATNR + +D ALLRPG
Sbjct: 195 EISLELNKKLD-EGNSDHNIRETRTNDLSRLFSQD-VKDLILVAATNRPEAIDGALLRPG 252
Query: 702 RLDRKIEFP 728
R+D I P
Sbjct: 253 RIDCMIYVP 261
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNV 641
P+ +F+DE+D++A KR + G + R+L LLN+MDG + N+
Sbjct: 107 PAILFLDELDSLAGKRGN-NLGME---TRLLATLLNEMDGVGVSANI 149
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 83.0 bits (196), Expect = 2e-16
Identities = 43/85 (50%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRF-DAQTGADREVQRILLELLNQMDGFDQTTNVKVIM 653
F ++ P IFIDEIDA+ R Q G E + L +LL +MDGF +TNV V+
Sbjct: 133 FAQARKNAPCIIFIDEIDAVGRARGRGGQFGGHDERENTLNQLLVEMDGFSSSTNVVVLS 192
Query: 654 ATNRADTLDPALLRPGRLDRKIEFP 728
TNR D LDPALLRPGR DR+I P
Sbjct: 193 GTNRPDVLDPALLRPGRFDRQIHLP 217
Score = 81.8 bits (193), Expect = 5e-16
Identities = 38/88 (43%), Positives = 57/88 (64%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K I E V L + + Y ++G + P+G ++ GPPG GKT+LAKAVA F+ + GS
Sbjct: 57 KLEIMEFVNF-LKNPQQYHELGAKIPKGAILSGPPGTGKTLLAKAVAGEAGVPFLSISGS 115
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EF++ ++G GP VRD+F A++N+P I
Sbjct: 116 EFLEMFVGVGPARVRDLFAQARKNAPCI 143
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 82.2 bits (194), Expect = 4e-16
Identities = 35/78 (44%), Positives = 52/78 (66%)
Frame = +1
Query: 277 PLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEG 456
P+ H E + +G+ P G+L+ GPPGCGKT+LAKA+A+ + FI V G E + Y+GE
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELLNMYVGES 61
Query: 457 PRMVRDVFRLAKENSPAI 510
R VR VF+ A+ ++P +
Sbjct: 62 ERAVRQVFQRARNSAPCV 79
Score = 35.5 bits (78), Expect = 0.045
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + P IF DE+D++ +R + R++ +LL +MDG +V ++ A
Sbjct: 69 FQRARNSAPCVIFFDELDSLCPRRSGSSESGSSV--RVVNQLLTEMDGLQARKHVFIMGA 126
Query: 657 TNRADTLD 680
TN+ D
Sbjct: 127 TNKPGIRD 134
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 76.2 bits (179), Expect = 3e-14
Identities = 38/88 (43%), Positives = 55/88 (62%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K I + ++LPL H EL+ G+ GVL+YGPPG GKT++AKAVA + F+ V G
Sbjct: 821 KEEILDTIQLPLLHPELFAA-GLRRS-GVLLYGPPGTGKTLMAKAVATECSLNFLSVKGP 878
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + Y+G+ + VR+VF A+ SP +
Sbjct: 879 ELINMYVGQSEQNVREVFSRAQAASPCV 906
Score = 67.3 bits (157), Expect = 1e-11
Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQ-RILLELLNQMDGFDQTTNVKVIM 653
F Q P IF DE+D++A R ++G V R++ +LL ++DG T +V VI
Sbjct: 896 FSRAQAASPCVIFFDELDSLAPNR--GRSGDSGGVMDRVVAQLLAELDGLHSTCDVFVIG 953
Query: 654 ATNRADTLDPALLRPGRLDR 713
ATNR D LDPALLRPGR D+
Sbjct: 954 ATNRPDLLDPALLRPGRFDK 973
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 173 SSISMLQADEKPDVQYSDIGGMDTQKQEL 259
S + A + PD+ + D+GG+D+ K+E+
Sbjct: 796 SHADAIGAPKIPDISWKDVGGLDSVKEEI 824
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 74.9 bits (176), Expect = 6e-14
Identities = 37/88 (42%), Positives = 53/88 (60%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + E V+ L Y Q+G + P+G L+ GPPG GKT+LAKAVA F+ + GS
Sbjct: 134 KMEVMEFVDY-LKSAGRYTQLGAKIPKGALLVGPPGTGKTLLAKAVATEADVPFLSMAGS 192
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
+FV+ + G G VRD+F A++ +P I
Sbjct: 193 DFVEMFAGVGSARVRDLFTRARKLAPCI 220
Score = 67.7 bits (158), Expect = 9e-12
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQT-GADREVQRILLELLNQMDGFDQTTNVKVIM 653
F ++ P ++IDE+DAI R +++ G E + L +LL +MDG + V ++
Sbjct: 210 FTRARKLAPCIVYIDEVDAIGRSRKSSRSMGGHNEQENTLNQLLVEMDGMNTLDGVIMLA 269
Query: 654 ATNRADTLDPALLRPGRLDRKIEFPL 731
+TNRAD LD ALLRPGR DR I L
Sbjct: 270 STNRADILDNALLRPGRFDRHIAIDL 295
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 74.5 bits (175), Expect = 8e-14
Identities = 31/77 (40%), Positives = 49/77 (63%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K +R+A+E PL H E + ++G+ PRGVL+YGPPGC KT L +A A T F+ + +
Sbjct: 493 KQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRAAASSTHCTFMSLSCA 552
Query: 427 EFVQKYLGEGPRMVRDV 477
+ Y+G+ R +R++
Sbjct: 553 QLFSSYVGDAERTLREL 569
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/73 (47%), Positives = 46/73 (63%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLD 680
P +FIDE+DA+ KR + + E RI+ +LL MDG + V VI ATNR + LD
Sbjct: 308 PCVLFIDELDALCPKR---GSSGNEEENRIVAQLLTLMDGLESRGRVIVIGATNRPNALD 364
Query: 681 PALLRPGRLDRKI 719
PAL RPGR DR++
Sbjct: 365 PALRRPGRFDREV 377
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
++E V+ PL + E + +GI P+G+L+ G PG GKT+L + G++
Sbjct: 223 LKELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVF 282
Query: 436 QKYLGEGPRMVRDVFRLAK 492
+ GE +R VF A+
Sbjct: 283 GPHAGESEENLRRVFNKAR 301
Score = 36.7 bits (81), Expect = 0.019
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +3
Query: 522 EIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPG 701
EI K+ D + +D ++ L+++ D ++ ++ ATNR + +D ALLRPG
Sbjct: 662 EISLELNKKLD-EGNSDHNIRETRTNDLSRLFSQD-VKDLILVAATNRPEAIDGALLRPG 719
Query: 702 RLDRKIEFP 728
R+D I P
Sbjct: 720 RIDCMIYVP 728
Score = 32.7 bits (71), Expect = 0.32
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNV 641
P +F+DE+D++A KR + G + R+L LLN+MDG + N+
Sbjct: 574 PLLLFLDELDSLAGKRGN-NLGMET---RLLATLLNEMDGVGVSANI 616
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 73.3 bits (172), Expect = 2e-13
Identities = 39/95 (41%), Positives = 57/95 (60%)
Frame = +1
Query: 226 YWRHGYTKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 405
Y + K ++E VE L + E ++++G + P GVL+ G PG GKT+LAKAVA
Sbjct: 133 YLKVDEAKEELQEVVEF-LRNPEKFKRLGGKLPTGVLLIGSPGTGKTLLAKAVAGEAGVP 191
Query: 406 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
F GSEF + ++G G VR++F AKE++P I
Sbjct: 192 FFFCSGSEFDEMFVGVGAARVRNLFAAAKEHAPCI 226
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 72.9 bits (171), Expect = 2e-13
Identities = 40/87 (45%), Positives = 51/87 (58%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + EAV LPL + ++ I P RGVLM GPPG GKTMLAKAVA F V S
Sbjct: 259 KKLLEEAVVLPLLMPDYFQGIR-RPWRGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSS 317
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPA 507
KY GE ++VR +F +A+ +P+
Sbjct: 318 TLTSKYRGESEKLVRILFEMARFYAPS 344
Score = 49.2 bits (112), Expect = 3e-06
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKR-FDAQTGADREVQRILLELLNQMDGF------DQTTNVKVIMAT 659
PS IF+DEID+I ++R D++ A R R+ ELL QMDG +T V V+ AT
Sbjct: 343 PSTIFVDEIDSICSRRGSDSEHEASR---RVKSELLVQMDGVGGSSDDGETKQVMVLAAT 399
Query: 660 NRADTLDPALLRPGRLDRKIEFPL 731
N LD AL R RL+++I PL
Sbjct: 400 NFPWDLDEALRR--RLEKRIYIPL 421
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/85 (40%), Positives = 51/85 (60%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F Q +P +F DE D++A +R TG R++ +LL Q+DG + V ++ A
Sbjct: 753 FTRAQSAKPCILFFDEFDSLAPRRGHDSTGV---TDRVVNQLLTQLDGVEGLKGVYILAA 809
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
T+R D +DPALLRPGRLD+ + P+
Sbjct: 810 TSRPDLIDPALLRPGRLDKCVYCPI 834
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/91 (36%), Positives = 48/91 (52%)
Frame = +1
Query: 238 GYTKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 417
G K ++E + P L+ + + G+L+YGPPG GKT+LA VA FI +
Sbjct: 673 GPVKGVLQETLLWPSKFAGLFAKCPLRLRGGLLLYGPPGTGKTLLAGVVAKECGLNFISI 732
Query: 418 VGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
G E + KY+G + VRD+F A+ P I
Sbjct: 733 KGPELLSKYIGASEQAVRDMFTRAQSAKPCI 763
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/77 (37%), Positives = 45/77 (58%)
Frame = +1
Query: 280 LTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGP 459
+ H E++ +G+ P G L++GPPGCGKT+LA A+A F+++ +E V GE
Sbjct: 696 MCHPEVFTTLGVTPTTGFLLHGPPGCGKTLLAHAIAGELEMPFLKLAATEIVSGVSGESE 755
Query: 460 RMVRDVFRLAKENSPAI 510
VR++F A +P I
Sbjct: 756 EKVRELFTSAVAQAPCI 772
Score = 64.5 bits (150), Expect = 8e-11
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQT--TNVKVI 650
F S + P +F+DEIDAI KR +A +R RI+ +LL+ MD + +V VI
Sbjct: 762 FTSAVAQAPCILFLDEIDAITPKRENASKDMER---RIVSQLLSCMDDLNNNPDAHVLVI 818
Query: 651 MATNRADTLDPALLRPGRLDRKI 719
ATNR D+LDPAL R GR DR+I
Sbjct: 819 GATNRPDSLDPALRRAGRFDREI 841
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 68.1 bits (159), Expect = 7e-12
Identities = 38/78 (48%), Positives = 46/78 (58%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTL 677
+PS IF DEID +A R Q D+ I+ LL MDG D V +I ATNR D +
Sbjct: 982 RPSIIFFDEIDGLAPVRSSRQ---DQIHSSIVSTLLALMDGLDSRGEVVIIGATNRIDAI 1038
Query: 678 DPALLRPGRLDRKIEFPL 731
DPAL RPGR DR+ +F L
Sbjct: 1039 DPALRRPGRFDREFQFAL 1056
Score = 65.3 bits (152), Expect = 5e-11
Identities = 32/90 (35%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTT-----AAFIRVV 420
++E + PL + E++ + I PPRGVL +GPPG GKT++A+A+A+ + +F
Sbjct: 896 LKEMILFPLVYPEVFDKFKITPPRGVLFFGPPGTGKTLVARALANECSQGDKKVSFFMRK 955
Query: 421 GSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
G++ + K++GE R +R +F A P+I
Sbjct: 956 GADCLSKWVGESERQLRLLFDQAYAMRPSI 985
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/74 (41%), Positives = 44/74 (59%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 689
I DE DA+ R+ TG ++ +LL ++DG +Q NV +I TNR D +D AL
Sbjct: 254 IIFDEFDAVCKSRYSYNTGGTGVQDSVVNQLLAKIDGVEQLNNVLLIGMTNRRDLIDDAL 313
Query: 690 LRPGRLDRKIEFPL 731
LRPGRL+ ++E L
Sbjct: 314 LRPGRLEVQVEIGL 327
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/81 (28%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVV-GSEF 432
+R A L ++ ++G++ +G+L++GPPG GKT++A+ + +++ G E
Sbjct: 160 VRRAFATRLFPADVVDKMGLKHVKGILLFGPPGTGKTLMARQIGTMLNTREPKIISGPEV 219
Query: 433 VQKYLGEGPRMVRDVFRLAKE 495
+ K++GE +R +F A+E
Sbjct: 220 LNKFVGESEANIRKLFAEAEE 240
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +1
Query: 277 PLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
P+ H E + +G+ P G+L+ GPPGCGKT+LAKA+A+ + FI V G E +
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPELL 54
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 56.4 bits (130), Expect = 2e-08
Identities = 20/34 (58%), Positives = 30/34 (88%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGC 357
+RE +ELPLT+ EL++++GI PP+G L++GPPGC
Sbjct: 147 LREVIELPLTNPELFQRVGIAPPKGCLLFGPPGC 180
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/89 (28%), Positives = 46/89 (51%)
Frame = +2
Query: 5 LEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSIS 184
L+ + + IV +T G Y V +D+ LK VAL + ++ LP E D +
Sbjct: 63 LKQLTEEKFIVKATNGPRYVVGCRRQVDKAKLKQGTRVALDMTTLTIMRYLPREVDPLVY 122
Query: 185 MLQADEKPDVQYSDIGGMDTQKQELEKLL 271
+ ++ ++ YSD+GG+ Q +EL +++
Sbjct: 123 NMSHEDPGNISYSDVGGLSEQIRELREVI 151
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 54.0 bits (124), Expect = 1e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +1
Query: 352 GCGKTMLAKAVAHHTT-AAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
G GK+ LAKAVA + FI V S+ V K+LGE R+V+ +F LA+EN P+I
Sbjct: 175 GTGKSYLAKAVATEANNSTFISVSSSDLVSKWLGESERLVKQLFELARENKPSI 228
Score = 44.4 bits (100), Expect = 1e-04
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD-QTTNVKVIM 653
F + +PS IFIDE+D++ R + ++ + R RI E L QM G V V+
Sbjct: 218 FELARENKPSIIFIDEVDSLCGSRSENESESAR---RIKTEFLVQMQGVGVDNDQVLVLG 274
Query: 654 ATNRADTLDPALLRPGRLDRKIEFPL 731
ATN TLD A+ R R +++I PL
Sbjct: 275 ATNIPWTLDSAIRR--RFEKRIYIPL 298
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/22 (45%), Positives = 19/22 (86%)
Frame = +2
Query: 200 EKPDVQYSDIGGMDTQKQELEK 265
EKP+V++SDI G+++ K+ L++
Sbjct: 90 EKPNVKWSDIAGLESAKEALKE 111
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 51.2 bits (117), Expect = 8e-07
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
++E V+ PL + E + +GI P+G+L+ G PG GKT+L + G++
Sbjct: 53 LKELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLLVHKATVDCGIKLVSTNGTDVF 112
Query: 436 QKYLGEGPRMVRDVFRLA 489
+ GE +R VF A
Sbjct: 113 GPHAGESEENLRRVFNKA 130
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 50.8 bits (116), Expect = 1e-06
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFD---AQTGADREVQRILLE-LLNQMDGFDQTTNVKVIMATNR 665
Q S I +++IDA KR + A G R+ LLN +DG + V M TN
Sbjct: 274 QQSIILLEDIDAAFVKRDETNAANKGGGMYQNRVTFSGLLNTLDGVASSEERVVFMTTNH 333
Query: 666 ADTLDPALLRPGRLDRKIE 722
LDPAL+RPGR+D K E
Sbjct: 334 LKRLDPALIRPGRVDFKQE 352
Score = 38.3 bits (85), Expect = 0.006
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +1
Query: 298 YRQIGIEPPRGVLMYGPPGCGKTMLAKAVA 387
Y GI RG L+YGPPGCGK+ +A+A
Sbjct: 214 YMDRGIPYRRGYLLYGPPGCGKSSFIQALA 243
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 325 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAK 492
R +L YGPPG GKTM AK++A H+ + + G + V +G EG + VF A+
Sbjct: 330 RNLLFYGPPGTGKTMFAKSLARHSGMDYAVMTGGDVVP--MGKEGVTAMHKVFDWAE 384
>SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10)
Length = 280
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 280 LTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGP 459
+ V YR + + + +++ G G GKT K + HH TA + S+ + LG GP
Sbjct: 218 IADVAFYRMLKEKKSQCIVISGESGSGKTESTKLIVHHLTALSRKTQASDVEKTILGVGP 277
>SB_43853| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 2065
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 265 AVELPLTHVELYRQI-GIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSE 429
A+ P T R + ++ PR +L+ G PG GKT L A+A + +R+ SE
Sbjct: 1597 ALSAPTTSQNATRILRALQLPRPILLEGSPGVGKTSLVSAIAKASGHELVRINLSE 1652
>SB_40955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 200 EKPDVQYSDIGGMDTQKQELEKLLNSLS--LMWSCTGKLVLSLLGV 331
E QY+ +G +D Q + EKL LS W+ TGK L+++ V
Sbjct: 50 EDGKAQYATVGDIDNQYESPEKLSKELSYETAWTATGKRQLTIVKV 95
>SB_27422| Best HMM Match : Dynamin_N (HMM E-Value=3)
Length = 485
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIR 414
I P +++ GP CGKT L + + HH F R
Sbjct: 6 IHTPCSLMVVGPSQCGKTTLIQQLIHHHPRCFDR 39
>SB_48094| Best HMM Match : MMR_HSR1 (HMM E-Value=0.82)
Length = 896
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYR-QIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAF 408
K +I E + L + + I P +++ GP CGKT L + + HH F
Sbjct: 114 KEKIEEELAASLVSAQYFPLDERIHTPCSLMVVGPSQCGKTTLIQQLIHHHPRCF 168
>SB_20945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 75
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +1
Query: 322 PRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRM 465
PR VL+ GP GCGK++ A+ +A + I V +E +++ L +G ++
Sbjct: 17 PRVVLL-GPTGCGKSVQAELLA--SKYGLINVSCTELIKQSLADGSKI 61
>SB_11032| Best HMM Match : AAA (HMM E-Value=3.5)
Length = 111
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQ-RILLELL 605
P+ IF+DEID++ T+R D + A R ++ L++L+
Sbjct: 20 PAVIFMDEIDSLLTQRTDGEHEASRRIKTEFLVQLV 55
>SB_10418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 334 LMYGPPGCGKTMLAKAVAHH 393
L+ GPPG GKT LA +A H
Sbjct: 384 LLCGPPGLGKTTLAHVIAQH 403
>SB_34887| Best HMM Match : Ribosomal_L30_N (HMM E-Value=0.95)
Length = 439
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -1
Query: 470 RTIRGPSPKYFCTNSDPTTRMNAAVV*CATALASIVLPQPGGPYMSTPRGGS 315
RT Y N P TR+ ++ C++A A PGG S+P GGS
Sbjct: 9 RTFSRCKKYYLLYNVTPYTRLTQRIL-CSSASAYNTPDSPGGGSQSSPGGGS 59
>SB_379| Best HMM Match : ADK (HMM E-Value=3.2e-05)
Length = 991
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 319 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 417
PP V + GPP GKT++AK +A A + V
Sbjct: 318 PPCKVCVLGPPHSGKTLVAKQLAERYNAKVLDV 350
>SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8)
Length = 796
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +1
Query: 286 HVELYRQIGIEP---PRGVLMYGPPGCGKT 366
H E RQ GI+P P L+ GP CGKT
Sbjct: 74 HREALRQRGIDPKNIPFNALIVGPTSCGKT 103
>SB_11522| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 277
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Frame = +3
Query: 561 TGADREVQ-RILLELLNQMDGFDQTTN-VKVIMATNRADTLDPALLRPGRLDRKI 719
+GA+ E R+ ELL QMDG ++ + V ++ A+N LD A+LR RL+++I
Sbjct: 117 SGAEHEGSLRMKTELLVQMDGLARSDDLVFLLAASNLPWELDHAMLR--RLEKRI 169
>SB_8559| Best HMM Match : Dpy-30 (HMM E-Value=3.7e-11)
Length = 806
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 310 GIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV--VGSEFVQKYLGEGPRMVRD 474
G+ P R ++ GPP GKT++ K + H IR+ V E ++K R +D
Sbjct: 355 GLLPVRACIL-GPPASGKTLVVKQLCTHYKLHHIRIQSVIDEAIEKLQQSAARADQD 410
>SB_55513| Best HMM Match : Pox_A32 (HMM E-Value=0.056)
Length = 937
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 286 HVELYRQIGIEPPRGVLMYGPPGCGKT 366
H+E+ R G P L+ GP CGKT
Sbjct: 468 HLEIKRTAGGSVPFNALIVGPTSCGKT 494
>SB_7001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -3
Query: 192 CNIEIELSASGGKTSTRALECLCRATEA--DGFNNSLSIV 79
CNI+IE GG TS+RA A + + NSL++V
Sbjct: 22 CNIQIEFLQPGGSTSSRASATAVELQFALYESYYNSLAVV 61
>SB_29134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKT 366
K ++ + + L++VELY+++ +G YG CG T
Sbjct: 33 KKEVQNSSIIDLSYVELYQKVNFLNLKGANSYGQLACGHT 72
>SB_26897| Best HMM Match : AAA (HMM E-Value=4.2e-12)
Length = 230
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVA 387
+L YGPPG GKT AVA
Sbjct: 13 LLFYGPPGTGKTSTILAVA 31
>SB_25516| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 609
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGE 453
+L+ GP G GKT+LA+ +A F + Q Y+GE
Sbjct: 273 ILLLGPTGSGKTLLAQTIARCLDVPFAICDCTALTQAGYVGE 314
>SB_22344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -3
Query: 381 SFSQHSFATTWWSVHEHTPRRLNTNLPVQLHMSERE 274
SFS +F WW HE R N LP L M +R+
Sbjct: 94 SFSAKAFM--WWVSHERESLRENAVLPPVLEMVDRD 127
>SB_36893| Best HMM Match : Fibrinogen_C (HMM E-Value=2.4e-24)
Length = 411
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/74 (20%), Positives = 35/74 (47%)
Frame = +2
Query: 224 DIGGMDTQKQELEKLLNSLSLMWSCTGKLVLSLLGVCSCTDHQVVAKLCWLKLLRITLQP 403
D+ + + KQ + ++++ + + K+ L VC ++ ++ C + P
Sbjct: 2 DMRDIHSGKQLKDHVVSNFTGLTERNCKVKCFLSDVCQSINYNRSSQACQISTSTRLQHP 61
Query: 404 HSFVSSDQSSYKST 445
H+FV+ +S+Y T
Sbjct: 62 HNFVNDTESTYHGT 75
>SB_21493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 325 RGVLMYGPPGCGKTMLAKAVAHH--TTAAFIRVVGSE 429
R VL+ G PG GKT +A +A F + GSE
Sbjct: 170 RAVLIAGQPGTGKTAIAMGMAQSLGPDTPFTSIAGSE 206
>SB_21151| Best HMM Match : AAA_2 (HMM E-Value=0)
Length = 373
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 316 EPPRGVLMYGPPGCGKTMLAKAVAHH---TTAAFIRVVGSEFVQKY 444
+P + G G GKT LAK ++ T + IR+ SE+++K+
Sbjct: 238 KPIGSFIFLGSTGVGKTQLAKVLSKELFDTEDSLIRIDMSEYMEKF 283
>SB_33872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 716
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 505 LGCSLWRDGKRHAPYGVLLLSTFVRT 428
+G ++ D K++APYG L TF T
Sbjct: 155 IGALIYTDPKKYAPYGTDLADTFPNT 180
>SB_8338| Best HMM Match : PA (HMM E-Value=5.7e-10)
Length = 326
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 505 LGCSLWRDGKRHAPYGVLLLSTFVRT 428
+G ++ D K++APYG L TF T
Sbjct: 246 IGALIYTDPKKYAPYGTDLADTFPNT 271
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,559,442
Number of Sequences: 59808
Number of extensions: 458332
Number of successful extensions: 1662
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1649
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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