Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00455
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 165 3e-41
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 132 2e-31
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 121 6e-28
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 121 6e-28
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 119 2e-27
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 118 4e-27
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 117 1e-26
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 116 1e-26
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 116 1e-26
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 115 4e-26
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 96 3e-20
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 96 3e-20
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 93 1e-19
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 87 9e-18
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 85 5e-17
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 80 2e-15
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 78 6e-15
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 77 1e-14
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 77 1e-14
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 76 2e-14
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 75 5e-14
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 73 2e-13
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 72 4e-13
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 71 8e-13
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 70 1e-12
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 70 1e-12
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 70 1e-12
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 70 1e-12
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 70 1e-12
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 69 5e-12
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 69 5e-12
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 69 5e-12
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 68 6e-12
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 68 6e-12
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 68 6e-12
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 62 4e-10
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 62 4e-10
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 62 4e-10
AC132211-4|AAN01432.2| 238|Caenorhabditis elegans Hypothetical ... 49 3e-06
AC024789-1|AAK85500.1| 238|Caenorhabditis elegans Hypothetical ... 49 3e-06
Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical p... 49 4e-06
Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical p... 49 4e-06
Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical pr... 41 0.001
AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical ... 33 0.21
Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical pr... 32 0.36
AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical ... 31 0.64
U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized mu... 30 1.5
AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L) prot... 30 1.5
U23529-5|AAL32212.2| 385|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans nonsense-medi... 29 3.4
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 29 3.4
AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor wi... 29 3.4
AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb (recombi... 29 4.5
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 28 7.8
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 28 7.8
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ... 28 7.8
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ... 28 7.8
AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna repl... 28 7.8
AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or ad... 28 7.8
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 165 bits (401), Expect = 3e-41
Identities = 77/88 (87%), Positives = 83/88 (94%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K +REAVELPLTH ELY+QIGI+PPRGVLMYGPPGCGKTMLAKAVA +T A+FIRVVGS
Sbjct: 170 KQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGS 229
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EFVQKYLGEGPRMVRDVFRLAKENSP+I
Sbjct: 230 EFVQKYLGEGPRMVRDVFRLAKENSPSI 257
Score = 153 bits (370), Expect = 2e-37
Identities = 75/85 (88%), Positives = 77/85 (90%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + PS IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMA
Sbjct: 247 FRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMA 306
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR DTLDPALLRPGRLDRKIEFPL
Sbjct: 307 TNRQDTLDPALLRPGRLDRKIEFPL 331
Score = 149 bits (360), Expect = 3e-36
Identities = 69/88 (78%), Positives = 77/88 (87%)
Frame = +2
Query: 2 FLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSI 181
FLEAVDQN IVGSTTGSNYYVR+LS +DRELLKP SVALHK+SNALVDVLPPEADSSI
Sbjct: 88 FLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSI 147
Query: 182 SMLQADEKPDVQYSDIGGMDTQKQELEK 265
ML+ DEKPD+ Y DIGG+D QKQE+ +
Sbjct: 148 QMLRPDEKPDISYGDIGGLDMQKQEVRE 175
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 132 bits (320), Expect = 2e-31
Identities = 56/85 (65%), Positives = 76/85 (89%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
I+EAVELPLTH E Y ++GI PP+GV++YG PG GKT+LAKAVA+ T+A F+R+VGSE +
Sbjct: 200 IKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELI 259
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
QKYLG+GP+MVR++FR+A+EN+P+I
Sbjct: 260 QKYLGDGPKMVRELFRVAEENAPSI 284
Score = 123 bits (297), Expect = 1e-28
Identities = 54/85 (63%), Positives = 70/85 (82%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + PS +FIDEIDA+ TKR+D+ +G +RE+QR +LELLNQ+DGFD +VKV+MA
Sbjct: 274 FRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMA 333
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR ++LDPAL+RPGR+DRKIEFPL
Sbjct: 334 TNRIESLDPALIRPGRIDRKIEFPL 358
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/86 (36%), Positives = 56/86 (65%)
Frame = +2
Query: 8 EAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISM 187
E +D IV + GS +YV I+S +D+E L+P SV L+ ++A++ VL + D +S+
Sbjct: 117 EIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSV 176
Query: 188 LQADEKPDVQYSDIGGMDTQKQELEK 265
++ ++ P Y+D+GG+D Q QE+++
Sbjct: 177 MKLEKAPQETYADVGGLDQQIQEIKE 202
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 121 bits (291), Expect = 6e-28
Identities = 52/85 (61%), Positives = 70/85 (82%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
I+E +ELP+ H EL+ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE V
Sbjct: 166 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 225
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
QK++GEG RMVR++F +A+E++P+I
Sbjct: 226 QKFIGEGARMVRELFVMAREHAPSI 250
Score = 113 bits (272), Expect = 1e-25
Identities = 53/84 (63%), Positives = 63/84 (75%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + PS IF+DEID+I + R + G D EVQR +LELLNQ+DGF+ T N+KVIMA
Sbjct: 240 FVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 299
Query: 657 TNRADTLDPALLRPGRLDRKIEFP 728
TNR D LD ALLRPGR+DRKIEFP
Sbjct: 300 TNRIDILDSALLRPGRIDRKIEFP 323
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/88 (28%), Positives = 51/88 (57%)
Frame = +2
Query: 8 EAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISM 187
+A+D+ +V + Y V + +++D L VAL + A+ +VLP + D +S+
Sbjct: 83 KAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSL 142
Query: 188 LQADEKPDVQYSDIGGMDTQKQELEKLL 271
+ ++ PD Y +GG+DTQ +E+++++
Sbjct: 143 MMVEKVPDSTYEMVGGLDTQIKEIKEVI 170
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 121 bits (291), Expect = 6e-28
Identities = 52/85 (61%), Positives = 70/85 (82%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
I+E +ELP+ H EL+ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE V
Sbjct: 187 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 246
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
QK++GEG RMVR++F +A+E++P+I
Sbjct: 247 QKFIGEGARMVRELFVMAREHAPSI 271
Score = 113 bits (272), Expect = 1e-25
Identities = 53/84 (63%), Positives = 63/84 (75%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + PS IF+DEID+I + R + G D EVQR +LELLNQ+DGF+ T N+KVIMA
Sbjct: 261 FVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 320
Query: 657 TNRADTLDPALLRPGRLDRKIEFP 728
TNR D LD ALLRPGR+DRKIEFP
Sbjct: 321 TNRIDILDSALLRPGRIDRKIEFP 344
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/88 (28%), Positives = 51/88 (57%)
Frame = +2
Query: 8 EAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISM 187
+A+D+ +V + Y V + +++D L VAL + A+ +VLP + D +S+
Sbjct: 104 KAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSL 163
Query: 188 LQADEKPDVQYSDIGGMDTQKQELEKLL 271
+ ++ PD Y +GG+DTQ +E+++++
Sbjct: 164 MMVEKVPDSTYEMVGGLDTQIKEIKEVI 191
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 119 bits (287), Expect = 2e-27
Identities = 51/85 (60%), Positives = 70/85 (82%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
I+E +ELP+ H EL+ +GI P+GVL++GPPG GKT+LA+AVAHHT FIRV GSE V
Sbjct: 171 IKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELV 230
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
QK++GEG RMVR++F +A+E++P+I
Sbjct: 231 QKFIGEGARMVRELFVMAREHAPSI 255
Score = 117 bits (282), Expect = 7e-27
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + PS IF+DEID+I + R + +G D EVQR +LELLNQ+DGF+ T N+KVIMA
Sbjct: 245 FVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMA 304
Query: 657 TNRADTLDPALLRPGRLDRKIEFP 728
TNR D LDPALLRPGR+DRKIEFP
Sbjct: 305 TNRIDILDPALLRPGRIDRKIEFP 328
Score = 51.6 bits (118), Expect = 6e-07
Identities = 27/88 (30%), Positives = 48/88 (54%)
Frame = +2
Query: 8 EAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISM 187
+A+D+ +V Y V + +ID L A VAL S AL +LP + D +S+
Sbjct: 88 KAMDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSL 147
Query: 188 LQADEKPDVQYSDIGGMDTQKQELEKLL 271
+ ++ PD Y +GG+D Q +E+++++
Sbjct: 148 MMVEKVPDSTYEMVGGLDKQIKEIKEVI 175
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 118 bits (284), Expect = 4e-27
Identities = 53/84 (63%), Positives = 67/84 (79%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + + PS +FIDEIDA+ TKRFD + ++EVQR LLELLNQ+DGF+ +VK+IMA
Sbjct: 269 FQMAKEQAPSIVFIDEIDAVGTKRFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMA 328
Query: 657 TNRADTLDPALLRPGRLDRKIEFP 728
TNR D+LDPAL+RPGR+DRKIE P
Sbjct: 329 TNRIDSLDPALIRPGRIDRKIELP 352
Score = 115 bits (276), Expect = 4e-26
Identities = 50/85 (58%), Positives = 68/85 (80%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
++E+VELPLTH E Y ++GI P+GV++YG PG GKT+LAKAVA+ T+A FIR GS+ V
Sbjct: 195 LKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANSTSATFIRATGSDLV 254
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
QK GEG R+VR +F++AKE +P+I
Sbjct: 255 QKQSGEGARLVRQIFQMAKEQAPSI 279
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 6/89 (6%)
Frame = +2
Query: 17 DQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHS------NALVDVLPPEADSS 178
+++ +V + +YV ILS +D++LL+ +A V + +A+V VL + DS+
Sbjct: 109 EKHAVVVVEGSRREWYVPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSN 168
Query: 179 ISMLQADEKPDVQYSDIGGMDTQKQELEK 265
+ ++ P + DIGG ++Q QEL++
Sbjct: 169 AMGHKVEKTPKETFDDIGGCESQIQELKE 197
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 117 bits (281), Expect = 1e-26
Identities = 51/80 (63%), Positives = 65/80 (81%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF 432
++RE VE PL H E Y +GIEPP+GVL+YGPPG GKT+ A+AVA+ T A FIRV+GSE
Sbjct: 188 KLREVVETPLLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSEL 247
Query: 433 VQKYLGEGPRMVRDVFRLAK 492
VQKY+GEG RMVR++F +A+
Sbjct: 248 VQKYVGEGARMVRELFEMAR 267
Score = 112 bits (269), Expect = 3e-25
Identities = 51/74 (68%), Positives = 59/74 (79%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 689
IF DEIDA+ RFD G D EVQR +LEL+NQ+DGFD N+KV+MATNR DTLDPAL
Sbjct: 274 IFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL 333
Query: 690 LRPGRLDRKIEFPL 731
+RPGRLDRK+EF L
Sbjct: 334 MRPGRLDRKVEFAL 347
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/41 (41%), Positives = 30/41 (73%)
Frame = +2
Query: 155 LPPEADSSISMLQADEKPDVQYSDIGGMDTQKQELEKLLNS 277
LP + D +++M+Q +EKPDV YSD+GG Q ++L +++ +
Sbjct: 155 LPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVET 195
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 116 bits (280), Expect = 1e-26
Identities = 56/78 (71%), Positives = 62/78 (79%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTL 677
QP +F+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFD VKVIMATNR DTL
Sbjct: 235 QPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTL 294
Query: 678 DPALLRPGRLDRKIEFPL 731
DPALLRPGRLDRKIE L
Sbjct: 295 DPALLRPGRLDRKIEIGL 312
Score = 103 bits (246), Expect = 2e-22
Identities = 43/85 (50%), Positives = 63/85 (74%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
+RE VELPL + EL++++GI PP+G L++GPPG GKT+LA+AVA F++VV S V
Sbjct: 154 LREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIV 213
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
KY+GE RM+R++F A+++ P I
Sbjct: 214 DKYIGESARMIREMFNYARDHQPCI 238
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/89 (28%), Positives = 48/89 (53%)
Frame = +2
Query: 5 LEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSIS 184
L+ + + IV +T G Y V +I++E LK V+L + ++ LP E D +
Sbjct: 70 LKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVY 129
Query: 185 MLQADEKPDVQYSDIGGMDTQKQELEKLL 271
+ ++ ++ YSD+GG+ Q +EL +++
Sbjct: 130 KMSHEDPGNISYSDVGGLAEQIRELREVV 158
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 116 bits (280), Expect = 1e-26
Identities = 56/78 (71%), Positives = 62/78 (79%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTL 677
QP +F+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFD VKVIMATNR DTL
Sbjct: 243 QPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTL 302
Query: 678 DPALLRPGRLDRKIEFPL 731
DPALLRPGRLDRKIE L
Sbjct: 303 DPALLRPGRLDRKIEIGL 320
Score = 103 bits (246), Expect = 2e-22
Identities = 43/85 (50%), Positives = 63/85 (74%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
+RE VELPL + EL++++GI PP+G L++GPPG GKT+LA+AVA F++VV S V
Sbjct: 162 LREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIV 221
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
KY+GE RM+R++F A+++ P I
Sbjct: 222 DKYIGESARMIREMFNYARDHQPCI 246
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/89 (28%), Positives = 48/89 (53%)
Frame = +2
Query: 5 LEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSIS 184
L+ + + IV +T G Y V +I++E LK V+L + ++ LP E D +
Sbjct: 78 LKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVY 137
Query: 185 MLQADEKPDVQYSDIGGMDTQKQELEKLL 271
+ ++ ++ YSD+GG+ Q +EL +++
Sbjct: 138 KMSHEDPGNISYSDVGGLAEQIRELREVV 166
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 115 bits (276), Expect = 4e-26
Identities = 54/84 (64%), Positives = 64/84 (76%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + + P+ IFIDE+DAI TKRFD++ DREVQR +LELLNQ+DGF ++KVI A
Sbjct: 263 FALAKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAA 322
Query: 657 TNRADTLDPALLRPGRLDRKIEFP 728
TNR D LDPALLR GRLDRKIE P
Sbjct: 323 TNRIDVLDPALLRSGRLDRKIELP 346
Score = 108 bits (260), Expect = 3e-24
Identities = 46/83 (55%), Positives = 64/83 (77%)
Frame = +1
Query: 262 EAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK 441
EAV LP+TH + + +GI PP+GVLMYGPPG GKTM+A+AVA T + F+++ G + VQ
Sbjct: 191 EAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQM 250
Query: 442 YLGEGPRMVRDVFRLAKENSPAI 510
++G+G ++VRD F LAKE +PAI
Sbjct: 251 FIGDGAKLVRDAFALAKEKAPAI 273
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/85 (36%), Positives = 52/85 (61%)
Frame = +2
Query: 5 LEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSIS 184
L+A ++ ++T + Y++ ++ +D + LKP V ++K S +++ LP E DS +
Sbjct: 105 LDAQKTKCAVIKTSTRATYFLPVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVK 164
Query: 185 MLQADEKPDVQYSDIGGMDTQKQEL 259
++ DE+P QYSDIGG D Q QEL
Sbjct: 165 AMEVDERPTEQYSDIGGCDKQIQEL 189
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF 432
+I+E VELPL H +L++ IG++PPRG+L++GPPG GKT++A+AVA+ T A F + G E
Sbjct: 220 QIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEI 279
Query: 433 VQKYLGEGPRMVRDVFRLAKENSPAI 510
+ K GE +R F ++NSPAI
Sbjct: 280 MSKMSGESESNLRKAFAECEKNSPAI 305
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/88 (46%), Positives = 57/88 (64%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++E V+ P+ H E Y + G++P RGVL YGPPGCGKT+LAKA+A+ A FI + G
Sbjct: 491 KRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 550
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + + GE VRDVF A+ +P +
Sbjct: 551 ELLTMWFGESEANVRDVFDKARAAAPCV 578
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + P +F DE+D+IA R + A R++ ++L +MDG + NV +I A
Sbjct: 568 FDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGA 627
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR D +DPA+LRPGRLD+ I PL
Sbjct: 628 TNRPDIIDPAVLRPGRLDQLIYIPL 652
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F ++ P+ +FIDEIDAIA KR A ++ RI+ +LL MDG +V VI A
Sbjct: 295 FAECEKNSPAILFIDEIDAIAPKREKAHGEVEK---RIVSQLLTLMDGLKTRAHVVVIAA 351
Query: 657 TNRADTLDPALLRPGRLDRKIE 722
TNR +++D AL R GR DR+I+
Sbjct: 352 TNRPNSIDGALRRFGRFDREID 373
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 80 TIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEL 259
TID E+L S +V + A+ P ++ E P+ +SDIGG+ K+EL
Sbjct: 441 TIDAEVLN-SLAVTMENFRFAMGKSSPSALREAVV-----ETPNTTWSDIGGLQNVKREL 494
Query: 260 EKLL 271
++L+
Sbjct: 495 QELV 498
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF 432
+I+E VELPL H +L++ IG++PPRG+L++GPPG GKT++A+AVA+ T A F + G E
Sbjct: 220 QIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEI 279
Query: 433 VQKYLGEGPRMVRDVFRLAKENSPAI 510
+ K GE +R F ++NSPAI
Sbjct: 280 MSKMSGESESNLRKAFAECEKNSPAI 305
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/88 (46%), Positives = 57/88 (64%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++E V+ P+ H E Y + G++P RGVL YGPPGCGKT+LAKA+A+ A FI + G
Sbjct: 491 KRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 550
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + + GE VRDVF A+ +P +
Sbjct: 551 ELLTMWFGESEANVRDVFDKARAAAPCV 578
Score = 72.9 bits (171), Expect = 2e-13
Identities = 36/85 (42%), Positives = 51/85 (60%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + P +F DE+D+IA R + A R++ ++L +MDG + NV +I A
Sbjct: 568 FDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGA 627
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR D +DPA+LRPGRLD+ I PL
Sbjct: 628 TNRPDIIDPAVLRPGRLDQLIYIPL 652
Score = 65.7 bits (153), Expect = 3e-11
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F ++ P+ +FIDEIDAIA KR A ++ RI+ +LL MDG +V VI A
Sbjct: 295 FAECEKNSPAILFIDEIDAIAPKREKAHGEVEK---RIVSQLLTLMDGLKTRAHVVVIAA 351
Query: 657 TNRADTLDPALLRPGRLDRKIE 722
TNR +++D AL R GR DR+I+
Sbjct: 352 TNRPNSIDGALRRFGRFDREID 373
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 80 TIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEL 259
TID E+L S +V + A+ P ++ E P+ +SDIGG+ K+EL
Sbjct: 441 TIDAEVLN-SLAVTMENFRFAMGKSSPSALREAVV-----ETPNTTWSDIGGLQNVKREL 494
Query: 260 EKLL 271
++L+
Sbjct: 495 QELV 498
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 93.5 bits (222), Expect = 1e-19
Identities = 41/86 (47%), Positives = 60/86 (69%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF 432
+I+E VELPL H +L++ IGI+PPRG+L++GPPG GKT++A+AVA+ T + F + G E
Sbjct: 221 QIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEV 280
Query: 433 VQKYLGEGPRMVRDVFRLAKENSPAI 510
+ K GE +R F ++N PAI
Sbjct: 281 MSKMSGESESNLRKAFEECEKNQPAI 306
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/88 (46%), Positives = 57/88 (64%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++E V+ P+ H E Y + G++P RGVL YGPPGCGKT+LAKA+A+ A FI + G
Sbjct: 492 KRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 551
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + + GE VRDVF A+ +P +
Sbjct: 552 ELLTMWFGESEANVRDVFDKARAAAPCV 579
Score = 68.9 bits (161), Expect = 3e-12
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQTTNVKVIM 653
F + P +F DE+D+IA R G R++ ++L +MDG + NV +I
Sbjct: 569 FDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIG 628
Query: 654 ATNRADTLDPALLRPGRLDRKIEFPL 731
ATNR D +DPA+LRPGRLD+ I PL
Sbjct: 629 ATNRPDIIDPAVLRPGRLDQLIYIPL 654
Score = 68.5 bits (160), Expect = 5e-12
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F ++ QP+ +FIDEIDAIA KR +T + E +RI+ +LL MDG +N+ VI A
Sbjct: 296 FEECEKNQPAILFIDEIDAIAPKR--EKTNGEVE-RRIVSQLLTLMDGVKGRSNLVVIAA 352
Query: 657 TNRADTLDPALLRPGRLDRKIE 722
TNR +++D AL R GR DR+I+
Sbjct: 353 TNRPNSIDGALRRFGRFDREID 374
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 200 EKPDVQYSDIGGMDTQKQELEKLL 271
E P+ +SDIGG+ K+EL++L+
Sbjct: 476 ETPNTTWSDIGGLQNVKRELQELV 499
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 87.4 bits (207), Expect = 9e-18
Identities = 36/88 (40%), Positives = 57/88 (64%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K I++AV P H E + + GI+PP G+L+YGPPGC KT++A+A+A F+ V G
Sbjct: 468 KLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARALASEAKMNFLAVKGP 527
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E K++G+ + +RD+F A++ +P I
Sbjct: 528 ELFSKWVGDSEKAIRDLFSRARQVAPTI 555
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/80 (45%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +3
Query: 483 SRQRE-QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMAT 659
SR R+ P+ +F DEIDA+ + R ++ + R+L +LL ++DG ++++ V ++ AT
Sbjct: 546 SRARQVAPTIVFFDEIDAVGSSRGSEKSSGVSD--RVLAQLLTELDGLEKSSRVILLAAT 603
Query: 660 NRADTLDPALLRPGRLDRKI 719
NR D LD ALLRPGRLDR I
Sbjct: 604 NRPDQLDSALLRPGRLDRAI 623
Score = 36.3 bits (80), Expect = 0.022
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 316 EPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG--EGPRMVRDVFRLA 489
E P VL++G PG GKT+L K VA + + + E + + G G ++ DV L
Sbjct: 270 ESPCSVLIWGLPGSGKTLLLKEVALVLSGSTTYIGSCEELMELNGVTTGNIVIVDVNELE 329
Query: 490 KENSPA 507
KEN+ A
Sbjct: 330 KENTKA 335
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/88 (45%), Positives = 57/88 (64%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K I E V L + + Y+ +G + P+G ++ GPPG GKT+LAKA A FI V GS
Sbjct: 302 KIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGS 360
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EF++ ++G GP VRD+F +A++NSP I
Sbjct: 361 EFLEMFVGVGPARVRDMFSMARKNSPCI 388
Score = 71.7 bits (168), Expect = 5e-13
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFD-AQTGADREVQRILLELLNQMDGFD-QTTNVKVI 650
F ++ P +FIDEIDA+ KR G E + L +LL +MDGF ++V VI
Sbjct: 378 FSMARKNSPCILFIDEIDAVGRKRGGKGGMGGHSEQENTLNQLLVEMDGFTTDESSVIVI 437
Query: 651 MATNRADTLDPALLRPGRLDRKIEFPL 731
ATNR D LD ALLRPGR DR+I P+
Sbjct: 438 AATNRVDILDSALLRPGRFDRQIYVPV 464
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 79.8 bits (188), Expect = 2e-15
Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIE-PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 423
+ ++ ++ P+ + + +GI+ P+G+L+ GPPGCGKT+LAKAVA+ T FI V G
Sbjct: 542 RKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKG 601
Query: 424 SEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + Y+GE R VR VF+ A+++ P +
Sbjct: 602 PELLNMYVGESERAVRTVFQRARDSQPCV 630
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = +1
Query: 280 LTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGP 459
L + + +G++PPRG +++GPPGCGKTM A+AVA +++ +E V GE
Sbjct: 225 LKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETE 284
Query: 460 RMVRDVFRLAKENSPAI 510
+R +F AK+NSP I
Sbjct: 285 EKIRRLFDTAKQNSPCI 301
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + QP IF DEIDA+ KR ++ R++ +LL +MDG + V +I A
Sbjct: 620 FQRARDSQPCVIFFDEIDALVPKRSHGESSGGA---RLVNQLLTEMDGVEGRQKVFLIGA 676
Query: 657 TNRADTLDPALLRPGRLDR--KIEFP 728
TNR D +D A+LRPGRLD+ ++FP
Sbjct: 677 TNRPDIVDAAILRPGRLDKILFVDFP 702
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQM 614
F + ++ P + +D+IDAIA +R AQ +R V L L+++
Sbjct: 291 FDTAKQNSPCILILDDIDAIAPRRETAQREMERRVVSQLCSSLDEL 336
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 131 HSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQELEKLLNSL 280
H N V+ + E D ++ LQ D+ P GG+ ++ E+ L+++
Sbjct: 466 HKNLTVEQIKEELDRVLAWLQGDDDPSALSELNGGLQISFEDFERALSTI 515
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 78.2 bits (184), Expect = 6e-15
Identities = 35/89 (39%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIE-PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 423
+ ++ ++ P+ + + +GI+ P+G+L+ GPPGCGKT+LAKAVA+ T F V G
Sbjct: 542 RKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANETGMNFFSVKG 601
Query: 424 SEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + Y+GE R VR VF+ A+++ P +
Sbjct: 602 PELLNMYVGESERAVRTVFQRARDSQPCV 630
Score = 72.5 bits (170), Expect = 3e-13
Identities = 31/77 (40%), Positives = 47/77 (61%)
Frame = +1
Query: 280 LTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGP 459
L + + +G++PPRG +++GPPGCGKTM A+AVA +++ +E V GE
Sbjct: 225 LKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETE 284
Query: 460 RMVRDVFRLAKENSPAI 510
+R +F AK+NSP I
Sbjct: 285 EKIRRLFDTAKQNSPCI 301
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + QP IF DEIDA+ KR ++ R++ +LL +MDG + V +I A
Sbjct: 620 FQRARDSQPCVIFFDEIDALVPKRSHGESSGGA---RLVNQLLTEMDGVEGRQKVFLIGA 676
Query: 657 TNRADTLDPALLRPGRLDR--KIEFP 728
TNR D +D A+LRPGRLD+ ++FP
Sbjct: 677 TNRPDIVDAAILRPGRLDKILFVDFP 702
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQM 614
F + ++ P + +D+IDAIA +R AQ +R V L L+++
Sbjct: 291 FDTAKQNSPCILILDDIDAIAPRRETAQREMERRVVSQLCSSLDEL 336
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +2
Query: 131 HSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQELEKLLNSL 280
H N V+ + E D ++ LQ D+ P GG+ ++ E+ L+++
Sbjct: 466 HKNLTVEQIKEELDRVLAWLQGDDDPSALSELNGGLQISFEDFERALSTI 515
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 77.0 bits (181), Expect = 1e-14
Identities = 39/88 (44%), Positives = 56/88 (63%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K IRE V+ L + + ++G + PRG L+ GPPGCGKT+LAKA+A +T FI + GS
Sbjct: 294 KVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMNGS 352
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EFV+ G G +R +F+ A+ +P I
Sbjct: 353 EFVEVIGGLGASRIRGLFKEARSRAPCI 380
Score = 68.1 bits (159), Expect = 6e-12
Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQT------GADREVQRILLELLNQMDGFDQTTN 638
F + P I+IDEIDAI KR + G E ++ L +LL +MDG
Sbjct: 370 FKEARSRAPCIIYIDEIDAIGRKRSEGAGAGGGFGGGSGEEEQTLNQLLVEMDGMGSGNG 429
Query: 639 VKVIMATNRADTLDPALLRPGRLDRKIEFPL 731
V V+ +TNRAD LD ALLRPGR DR I L
Sbjct: 430 VVVLASTNRADVLDKALLRPGRFDRHISIDL 460
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 77.0 bits (181), Expect = 1e-14
Identities = 39/88 (44%), Positives = 56/88 (63%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K IRE V+ L + + ++G + PRG L+ GPPGCGKT+LAKA+A +T FI + GS
Sbjct: 294 KVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMNGS 352
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EFV+ G G +R +F+ A+ +P I
Sbjct: 353 EFVEVIGGLGASRIRGLFKEARSRAPCI 380
Score = 68.1 bits (159), Expect = 6e-12
Identities = 40/91 (43%), Positives = 49/91 (53%), Gaps = 6/91 (6%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQT------GADREVQRILLELLNQMDGFDQTTN 638
F + P I+IDEIDAI KR + G E ++ L +LL +MDG
Sbjct: 370 FKEARSRAPCIIYIDEIDAIGRKRSEGAGAGGGFGGGSGEEEQTLNQLLVEMDGMGSGNG 429
Query: 639 VKVIMATNRADTLDPALLRPGRLDRKIEFPL 731
V V+ +TNRAD LD ALLRPGR DR I L
Sbjct: 430 VVVLASTNRADVLDKALLRPGRFDRHISIDL 460
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/88 (43%), Positives = 52/88 (59%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + E V+ L E Y ++G P+GVL+ GPPG GKT+LA+A+A F GS
Sbjct: 210 KLEVEEIVDY-LKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGS 268
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EF + +G+G R VRD+F AK +P I
Sbjct: 269 EFDEVLVGQGARRVRDLFDKAKARAPCI 296
Score = 68.5 bits (160), Expect = 5e-12
Identities = 35/84 (41%), Positives = 48/84 (57%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + P IFIDEID++ +KR + + +LL++MDGF + + VI A
Sbjct: 286 FDKAKARAPCIIFIDEIDSVGSKR--VSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAA 343
Query: 657 TNRADTLDPALLRPGRLDRKIEFP 728
TNR D LD ALLRPGR D ++ P
Sbjct: 344 TNRVDDLDKALLRPGRFDVRVTVP 367
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 74.9 bits (176), Expect = 5e-14
Identities = 34/88 (38%), Positives = 53/88 (60%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K +RE V LP +++ I PP+GVL++GPPG GKTM+ + VA A F + S
Sbjct: 325 KKALREIVVLPFKRPDVFTGIRA-PPKGVLLFGPPGTGKTMIGRCVASQCKATFFNISAS 383
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
K++GEG ++VR +F +A+ P++
Sbjct: 384 SLTSKWVGEGEKLVRALFSVARLKLPSV 411
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIM--ATNRADT 674
PS IFIDEID++ + R +++ + R RI E L Q+DG + + ++++ ATNR
Sbjct: 409 PSVIFIDEIDSLLSSRSESEHESSR---RIKTEFLVQLDGVNTAPDERLLVLGATNRPQE 465
Query: 675 LDPALLR 695
LD A R
Sbjct: 466 LDEAARR 472
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
+++ + LPL + PPRG+L+YGPPGCGKT+LAKAVA FI + S
Sbjct: 92 LKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLT 151
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
K+ GE ++ VF +A++ P I
Sbjct: 152 DKWYGESQKLAAAVFSVAQKFQPTI 176
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIM- 653
F Q+ QP+ IFIDEID+ D Q+ + + + DGF + + ++M
Sbjct: 166 FSVAQKFQPTIIFIDEIDSFLR---DRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMG 222
Query: 654 ATNRADTLDPALLRPGRLDRKIEFPL 731
ATNR +D A+LR R+ + + P+
Sbjct: 223 ATNRPRDVDAAILR--RMTARFQVPV 246
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/85 (40%), Positives = 49/85 (57%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
+++ + LPL + PPRG+L+YGPPGCGKT+LAKAVA FI + S
Sbjct: 95 LKDRIILPLRFASQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAAGCRFINLQVSNLT 154
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
K+ GE ++ VF +A++ P I
Sbjct: 155 DKWYGESQKLAAAVFSVAQKFQPTI 179
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIM- 653
F Q+ QP+ IFIDEID+ D Q+ + + + DGF + + ++M
Sbjct: 169 FSVAQKFQPTIIFIDEIDSFLR---DRQSHDHESTAMMKAQFMTLWDGFSSSGDQIIVMG 225
Query: 654 ATNRADTLDPALLRPGRLDRKIEFPL 731
ATNR +D A+LR R+ + + P+
Sbjct: 226 ATNRPRDVDAAILR--RMTARFQVPV 249
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 72.1 bits (169), Expect = 4e-13
Identities = 32/88 (36%), Positives = 55/88 (62%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + EAV LP + L++ + +P +G+L++GPPG GKT+LAKAVA + F + S
Sbjct: 187 KAALEEAVILPALNPNLFKGLR-QPVKGILLFGPPGNGKTLLAKAVAGESKQMFFNISAS 245
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
K++G+ + +R +F++A+ P+I
Sbjct: 246 SLTSKWVGDSEKTIRGLFQIARNAQPSI 273
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/75 (41%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTN--VKVI 650
F + QPS IFIDEID+I +R + R R+ E L Q DG + + + VI
Sbjct: 263 FQIARNAQPSIIFIDEIDSILCERSEKDAEVSR---RMKTEFLVQFDGATSSADDRILVI 319
Query: 651 MATNRADTLDPALLR 695
ATNR LD A+LR
Sbjct: 320 GATNRPHELDDAVLR 334
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 70.9 bits (166), Expect = 8e-13
Identities = 34/89 (38%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHT-TAAFIRVVG 423
K ++EAV LP+ +L+ +P +G+L++GPPG GK+ +AKAVA + F +
Sbjct: 127 KEALKEAVILPIKFPQLFTG-NRKPWQGILLFGPPGTGKSYIAKAVATEAGESTFFSISS 185
Query: 424 SEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
S+ + K+LGE ++V+++F LA+E+ P+I
Sbjct: 186 SDLMSKWLGESEKLVKNLFALAREHKPSI 214
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD-QTTNVKVIM 653
F + +PS IFIDEID++ + R D ++ + R RI E + QM G + V+
Sbjct: 204 FALAREHKPSIIFIDEIDSLCSARSDNESESAR---RIKTEFMVQMQGVGLNNDGILVLG 260
Query: 654 ATNRADTLDPALLRPGRLDRKIEFPL 731
ATN LD A+ R R +++I PL
Sbjct: 261 ATNIPWILDSAIRR--RFEKRIYIPL 284
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/78 (52%), Positives = 47/78 (60%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTL 677
+PS IF DEID +A R Q D+ I+ LL MDG D V VI ATNR DTL
Sbjct: 489 RPSIIFFDEIDGLAPVRSSKQ---DQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTL 545
Query: 678 DPALLRPGRLDRKIEFPL 731
DPAL RPGR DR++ F L
Sbjct: 546 DPALRRPGRFDRELRFSL 563
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Frame = +1
Query: 238 GYTKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH-----TTA 402
G+ ++E V P+ + E++ + I PP+GV+ YGPPG GKT++A+A+A+
Sbjct: 397 GHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKV 456
Query: 403 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
AF G++ + K++GE R +R +F A P+I
Sbjct: 457 AFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSI 492
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/78 (52%), Positives = 47/78 (60%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTL 677
+PS IF DEID +A R Q D+ I+ LL MDG D V VI ATNR DTL
Sbjct: 487 RPSIIFFDEIDGLAPVRSSKQ---DQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTL 543
Query: 678 DPALLRPGRLDRKIEFPL 731
DPAL RPGR DR++ F L
Sbjct: 544 DPALRRPGRFDRELRFSL 561
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Frame = +1
Query: 238 GYTKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH-----TTA 402
G+ ++E V P+ + E++ + I PP+GV+ YGPPG GKT++A+A+A+
Sbjct: 395 GHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKV 454
Query: 403 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
AF G++ + K++GE R +R +F A P+I
Sbjct: 455 AFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSI 490
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/78 (52%), Positives = 47/78 (60%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTL 677
+PS IF DEID +A R Q D+ I+ LL MDG D V VI ATNR DTL
Sbjct: 489 RPSIIFFDEIDGLAPVRSSKQ---DQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTL 545
Query: 678 DPALLRPGRLDRKIEFPL 731
DPAL RPGR DR++ F L
Sbjct: 546 DPALRRPGRFDRELRFSL 563
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Frame = +1
Query: 238 GYTKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH-----TTA 402
G+ ++E V P+ + E++ + I PP+GV+ YGPPG GKT++A+A+A+
Sbjct: 397 GHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKV 456
Query: 403 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
AF G++ + K++GE R +R +F A P+I
Sbjct: 457 AFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSI 492
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/78 (52%), Positives = 47/78 (60%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTL 677
+PS IF DEID +A R Q D+ I+ LL MDG D V VI ATNR DTL
Sbjct: 489 RPSIIFFDEIDGLAPVRSSKQ---DQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTL 545
Query: 678 DPALLRPGRLDRKIEFPL 731
DPAL RPGR DR++ F L
Sbjct: 546 DPALRRPGRFDRELRFSL 563
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Frame = +1
Query: 238 GYTKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH-----TTA 402
G+ ++E V P+ + E++ + I PP+GV+ YGPPG GKT++A+A+A+
Sbjct: 397 GHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKV 456
Query: 403 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
AF G++ + K++GE R +R +F A P+I
Sbjct: 457 AFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSI 492
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/78 (52%), Positives = 47/78 (60%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTL 677
+PS IF DEID +A R Q D+ I+ LL MDG D V VI ATNR DTL
Sbjct: 487 RPSIIFFDEIDGLAPVRSSKQ---DQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTL 543
Query: 678 DPALLRPGRLDRKIEFPL 731
DPAL RPGR DR++ F L
Sbjct: 544 DPALRRPGRFDRELRFSL 561
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Frame = +1
Query: 238 GYTKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH-----TTA 402
G+ ++E V P+ + E++ + I PP+GV+ YGPPG GKT++A+A+A+
Sbjct: 395 GHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKV 454
Query: 403 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
AF G++ + K++GE R +R +F A P+I
Sbjct: 455 AFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSI 490
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/78 (52%), Positives = 47/78 (60%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTL 677
+PS IF DEID +A R Q D+ I+ LL MDG D V VI ATNR DTL
Sbjct: 489 RPSIIFFDEIDGLAPVRSSKQ---DQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTL 545
Query: 678 DPALLRPGRLDRKIEFPL 731
DPAL RPGR DR++ F L
Sbjct: 546 DPALRRPGRFDRELRFSL 563
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Frame = +1
Query: 238 GYTKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH-----TTA 402
G+ ++E V P+ + E++ + I PP+GV+ YGPPG GKT++A+A+A+
Sbjct: 397 GHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKV 456
Query: 403 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
AF G++ + K++GE R +R +F A P+I
Sbjct: 457 AFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSI 492
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/78 (52%), Positives = 47/78 (60%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTL 677
+PS IF DEID +A R Q D+ I+ LL MDG D V VI ATNR DTL
Sbjct: 489 RPSIIFFDEIDGLAPVRSSKQ---DQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTL 545
Query: 678 DPALLRPGRLDRKIEFPL 731
DPAL RPGR DR++ F L
Sbjct: 546 DPALRRPGRFDRELRFSL 563
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Frame = +1
Query: 238 GYTKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH-----TTA 402
G+ ++E V P+ + E++ + I PP+GV+ YGPPG GKT++A+A+A+
Sbjct: 397 GHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARALANECRRGANKV 456
Query: 403 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
AF G++ + K++GE R +R +F A P+I
Sbjct: 457 AFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSI 492
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +1
Query: 328 GVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPA 507
G+++YG PGCGKT++AKAVA AF+ V G E + KY+G+ +R VF AK+ SP
Sbjct: 495 GIILYGSPGCGKTLIAKAVATEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPC 554
Query: 508 I 510
+
Sbjct: 555 V 555
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQT--TNVKVI 650
F ++ P IF DEID++A R + + RI+ +LL ++D + T V V+
Sbjct: 545 FERAKQASPCVIFFDEIDSLAPNR-GRNGDSGGVIDRIVSQLLAELDKLHNSPLTKVFVM 603
Query: 651 MATNRADTLDPALLRPGRLDRKIE 722
ATNR D LD +L+ PGR D+ +E
Sbjct: 604 GATNRPDLLDNSLMTPGRFDKLVE 627
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +1
Query: 328 GVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPA 507
G+++YG PGCGKT++AKAVA AF+ V G E + KY+G+ +R VF AK+ SP
Sbjct: 495 GIILYGSPGCGKTLIAKAVATEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPC 554
Query: 508 I 510
+
Sbjct: 555 V 555
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQT--TNVKVI 650
F ++ P IF DEID++A R + + RI+ +LL ++D + T V V+
Sbjct: 545 FERAKQASPCVIFFDEIDSLAPNR-GRNGDSGGVIDRIVSQLLAELDKLHNSPLTKVFVM 603
Query: 651 MATNRADTLDPALLRPGRLDRKIE 722
ATNR D LD +L+ PGR D+ +E
Sbjct: 604 GATNRPDLLDNSLMTPGRFDKLVE 627
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 68.5 bits (160), Expect = 5e-12
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +1
Query: 328 GVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPA 507
G+++YG PGCGKT++AKAVA AF+ V G E + KY+G+ +R VF AK+ SP
Sbjct: 495 GIILYGSPGCGKTLIAKAVATEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPC 554
Query: 508 I 510
+
Sbjct: 555 V 555
Score = 52.8 bits (121), Expect = 2e-07
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQT--TNVKVI 650
F ++ P IF DEID++A R + + RI+ +LL ++D + T V V+
Sbjct: 545 FERAKQASPCVIFFDEIDSLAPNR-GRNGDSGGVIDRIVSQLLAELDKLHNSPLTKVFVM 603
Query: 651 MATNRADTLDPALLRPGRLDRKIE 722
ATNR D LD +L+ PGR D+ +E
Sbjct: 604 GATNRPDLLDNSLMTPGRFDKLVE 627
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 68.1 bits (159), Expect = 6e-12
Identities = 29/88 (32%), Positives = 50/88 (56%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + + + P + +L+ +G+ +G+L++GP GCGKT+LA A ++ + + V G
Sbjct: 11 KKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSNFSVVNVKGP 70
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + KY+G VR VF A+ +P I
Sbjct: 71 ELLSKYIGASEENVRLVFEKARSCAPCI 98
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA-TNRADTL 677
P +F DE+D++A KR TG R++ +LL ++DG + +I+ T+R D +
Sbjct: 96 PCILFFDELDSLAPKRGHDSTGV---TDRVVNQLLTELDGAEGGMKGVIILGCTSRIDLI 152
Query: 678 DPALLRPGRLDRKI 719
D ALLRPGR D +
Sbjct: 153 DDALLRPGRFDHHV 166
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 68.1 bits (159), Expect = 6e-12
Identities = 29/88 (32%), Positives = 50/88 (56%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + + + P + +L+ +G+ +G+L++GP GCGKT+LA A ++ + + V G
Sbjct: 737 KKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSNFSVVNVKGP 796
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + KY+G VR VF A+ +P I
Sbjct: 797 ELLSKYIGASEENVRLVFEKARSCAPCI 824
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA-TNRADTL 677
P +F DE+D++A KR TG R++ +LL ++DG + +I+ T+R D +
Sbjct: 822 PCILFFDELDSLAPKRGHDSTGV---TDRVVNQLLTELDGAEGGMKGVIILGCTSRIDLI 878
Query: 678 DPALLRPGRLDRKI 719
D ALLRPGR D +
Sbjct: 879 DDALLRPGRFDHHV 892
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 68.1 bits (159), Expect = 6e-12
Identities = 29/88 (32%), Positives = 50/88 (56%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + + + P + +L+ +G+ +G+L++GP GCGKT+LA A ++ + + V G
Sbjct: 737 KKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTLLANATISNSNFSVVNVKGP 796
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + KY+G VR VF A+ +P I
Sbjct: 797 ELLSKYIGASEENVRLVFEKARSCAPCI 824
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA-TNRADTL 677
P +F DE+D++A KR TG R++ +LL ++DG + +I+ T+R D +
Sbjct: 822 PCILFFDELDSLAPKRGHDSTGV---TDRVVNQLLTELDGAEGGMKGVIILGCTSRIDLI 878
Query: 678 DPALLRPGRLDRKI 719
D ALLRPGR D +
Sbjct: 879 DDALLRPGRFDHHV 892
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 689
I DEIDAI +R + G+ ++ +LL++MDG +Q N+ VI TNR D +D AL
Sbjct: 402 IIFDEIDAICKQR-GSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEAL 460
Query: 690 LRPGRLDRKIEFPL 731
LRPGRL+ ++E L
Sbjct: 461 LRPGRLEVQMEVSL 474
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVV-GSEFVQKYLGEGPRMV 468
E Q+G++ RG+L++GPPG GKT++A+ + A ++V G + + KY+GE V
Sbjct: 320 EFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESESNV 379
Query: 469 RDVFRLAKE 495
R +F A+E
Sbjct: 380 RKLFADAEE 388
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 689
I DEIDAI +R + G+ ++ +LL++MDG +Q N+ VI TNR D +D AL
Sbjct: 402 IIFDEIDAICKQR-GSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEAL 460
Query: 690 LRPGRLDRKIEFPL 731
LRPGRL+ ++E L
Sbjct: 461 LRPGRLEVQMEVSL 474
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVV-GSEFVQKYLGEGPRMV 468
E Q+G++ RG+L++GPPG GKT++A+ + A ++V G + + KY+GE V
Sbjct: 320 EFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESESNV 379
Query: 469 RDVFRLAKE 495
R +F A+E
Sbjct: 380 RKLFADAEE 388
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/74 (44%), Positives = 47/74 (63%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 689
I DEIDAI +R + G+ ++ +LL++MDG +Q N+ VI TNR D +D AL
Sbjct: 336 IIFDEIDAICKQR-GSMAGSSSVHDTVVNQLLSKMDGVEQLNNILVIGMTNRRDMIDEAL 394
Query: 690 LRPGRLDRKIEFPL 731
LRPGRL+ ++E L
Sbjct: 395 LRPGRLEVQMEVSL 408
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/69 (37%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVV-GSEFVQKYLGEGPRMV 468
E Q+G++ RG+L++GPPG GKT++A+ + A ++V G + + KY+GE V
Sbjct: 254 EFIEQLGMKHVRGILLFGPPGTGKTLMARQIGKMLNAREPKIVNGPQILDKYVGESESNV 313
Query: 469 RDVFRLAKE 495
R +F A+E
Sbjct: 314 RKLFADAEE 322
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 62.1 bits (144), Expect = 4e-10
Identities = 30/88 (34%), Positives = 55/88 (62%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + EAV LPL E ++ + P + +++ GPPG GKT++A+A+A +++ F V +
Sbjct: 202 KQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIARAIASESSSTFFTVSST 260
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
+ K+ G+ ++VR +F LA+ +P+I
Sbjct: 261 DLSSKWRGDSEKIVRLLFELARFYAPSI 288
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDG----FDQTTNVKVIMATNRA 668
PS IFIDEID + +R +G +R+ E L QMDG FD + V V+ ATN
Sbjct: 286 PSIIFIDEIDTLGGQR--GNSGEHEASRRVKSEFLVQMDGSQNKFD-SRRVFVLAATNIP 342
Query: 669 DTLDPALLRPGRLDRKIEFPL 731
LD AL R R +++I PL
Sbjct: 343 WELDEALRR--RFEKRIFIPL 361
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 62.1 bits (144), Expect = 4e-10
Identities = 30/88 (34%), Positives = 55/88 (62%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + EAV LPL E ++ + P + +++ GPPG GKT++A+A+A +++ F V +
Sbjct: 202 KQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIARAIASESSSTFFTVSST 260
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
+ K+ G+ ++VR +F LA+ +P+I
Sbjct: 261 DLSSKWRGDSEKIVRLLFELARFYAPSI 288
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDG----FDQTTNVKVIMATNRA 668
PS IFIDEID + +R +G +R+ E L QMDG FD + V V+ ATN
Sbjct: 286 PSIIFIDEIDTLGGQR--GNSGEHEASRRVKSEFLVQMDGSQNKFD-SRRVFVLAATNIP 342
Query: 669 DTLDPALLRPGRLDRKIEFPL 731
LD AL R R +++I PL
Sbjct: 343 WELDEALRR--RFEKRIFIPL 361
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 62.1 bits (144), Expect = 4e-10
Identities = 30/88 (34%), Positives = 55/88 (62%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + EAV LPL E ++ + P + +++ GPPG GKT++A+A+A +++ F V +
Sbjct: 202 KQVLHEAVTLPLLVPEFFQGLR-SPWKAMVLAGPPGTGKTLIARAIASESSSTFFTVSST 260
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
+ K+ G+ ++VR +F LA+ +P+I
Sbjct: 261 DLSSKWRGDSEKIVRLLFELARFYAPSI 288
Score = 43.2 bits (97), Expect = 2e-04
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDG----FDQTTNVKVIMATNRA 668
PS IFIDEID + +R +G +R+ E L QMDG FD + V V+ ATN
Sbjct: 286 PSIIFIDEIDTLGGQR--GNSGEHEASRRVKSEFLVQMDGSQNKFD-SRRVFVLAATNIP 342
Query: 669 DTLDPALLRPGRLDRKIEFPL 731
LD AL R R +++I PL
Sbjct: 343 WELDEALRR--RFEKRIFIPL 361
>AC132211-4|AAN01432.2| 238|Caenorhabditis elegans Hypothetical
protein Y108F1.1 protein.
Length = 238
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 564 GADREVQRILLELLNQMDGFDQTTNVKVIMA-TNRADTLDPALLRPGRLDRKIEFPL 731
G E ++ L +LL +MD V++A TNRAD LD ALLRPGR DR I L
Sbjct: 50 GGSGEEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDL 106
>AC024789-1|AAK85500.1| 238|Caenorhabditis elegans Hypothetical
protein Y47C4A.1 protein.
Length = 238
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +3
Query: 564 GADREVQRILLELLNQMDGFDQTTNVKVIMA-TNRADTLDPALLRPGRLDRKIEFPL 731
G E ++ L +LL +MD V++A TNRAD LD ALLRPGR DR I L
Sbjct: 50 GGSGEEEQTLNQLLVEMDRMGSGNGAVVVLASTNRADVLDKALLRPGRFDRHISIDL 106
>Z49967-12|CAI70401.1| 396|Caenorhabditis elegans Hypothetical
protein F54C9.6b protein.
Length = 396
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +3
Query: 504 SNIFIDEIDAIATKRFDAQTG--ADREVQRILLE-LLNQMDGFDQTTNVKVIMATNRADT 674
S + +++IDA R D + A + + R+ LLN +DG M TN +
Sbjct: 251 SVVILEDIDAAFVSREDPMSNHPAYQGLSRVTFSGLLNALDGVACAEERLTFMTTNYVER 310
Query: 675 LDPALLRPGRLDRKIEF 725
LDPAL+RPGR+DRK F
Sbjct: 311 LDPALIRPGRVDRKQYF 327
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 298 YRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
Y G+ RG L YGPPG GK+ A+A H
Sbjct: 189 YADRGVPYRRGYLFYGPPGTGKSSFISALASH 220
>Z49967-11|CAA90252.1| 442|Caenorhabditis elegans Hypothetical
protein F54C9.6a protein.
Length = 442
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +3
Query: 504 SNIFIDEIDAIATKRFDAQTG--ADREVQRILLE-LLNQMDGFDQTTNVKVIMATNRADT 674
S + +++IDA R D + A + + R+ LLN +DG M TN +
Sbjct: 297 SVVILEDIDAAFVSREDPMSNHPAYQGLSRVTFSGLLNALDGVACAEERLTFMTTNYVER 356
Query: 675 LDPALLRPGRLDRKIEF 725
LDPAL+RPGR+DRK F
Sbjct: 357 LDPALIRPGRVDRKQYF 373
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 298 YRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
Y G+ RG L YGPPG GK+ A+A H
Sbjct: 235 YADRGVPYRRGYLFYGPPGTGKSSFISALASH 266
>Z48583-2|CAA88471.2| 595|Caenorhabditis elegans Hypothetical
protein F54B3.3 protein.
Length = 595
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 325 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG-EGPRMVRDVFRLAKEN 498
R V+ YGPPG GKT+ AK++A H+ + + G + LG +G + VF A ++
Sbjct: 343 RNVMFYGPPGTGKTLFAKSLAQHSGLDYAVLTGGDIAP--LGRDGVSAIHKVFDWASKS 399
>AC006610-2|AAK85448.1| 445|Caenorhabditis elegans Hypothetical
protein C30F12.2 protein.
Length = 445
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 322 PRGVLMYGPPGCGKTML 372
PRG+ +YG GCGKTML
Sbjct: 90 PRGIYLYGSVGCGKTML 106
>Z48334-5|CAA88312.1| 424|Caenorhabditis elegans Hypothetical
protein F10B5.5 protein.
Length = 424
Score = 32.3 bits (70), Expect = 0.36
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 325 RGVLMYGPPGCGKTMLAKAVAHH 393
R +L+ GPPG GKT L K +A H
Sbjct: 173 RLILLTGPPGTGKTSLCKGLAQH 195
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGAD-REVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPA 686
+ IDE++++ R + + ++ + R + LL Q+D + NV ++ +N TLD A
Sbjct: 249 VLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRDNVLILCTSNLESTLDKA 308
Query: 687 LL 692
L+
Sbjct: 309 LV 310
>AL033514-5|CAA22082.1| 773|Caenorhabditis elegans Hypothetical
protein Y75B8A.4 protein.
Length = 773
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 343 GPPGCGKTMLAKAVAHHTTAAFIRV 417
GPPG GKT +AKA+A F RV
Sbjct: 336 GPPGIGKTSIAKAIAESMGRKFQRV 360
>U39667-6|AAC69011.2| 640|Caenorhabditis elegans Disorganized
muscle protein 1,isoform a protein.
Length = 640
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +2
Query: 17 DQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQA 196
+Q G+ S Y++R++ T K +A +K + LPP ++++
Sbjct: 78 NQQKGMTEKPKHSEYFLRLMKTRQEMQKKLTAKNGSNKSVQQYLRKLPPSTSKEVTIIPV 137
Query: 197 DEKPD 211
KPD
Sbjct: 138 KMKPD 142
>AY095447-1|AAM23316.1| 640|Caenorhabditis elegans DIM-1(L)
protein.
Length = 640
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +2
Query: 17 DQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQA 196
+Q G+ S Y++R++ T K +A +K + LPP ++++
Sbjct: 78 NQQKGMTEKPKHSEYFLRLMKTRQEMQKKLTAKNGSNKSVQQYLRKLPPSTSKEVTIIPV 137
Query: 197 DEKPD 211
KPD
Sbjct: 138 KMKPD 142
>U23529-5|AAL32212.2| 385|Caenorhabditis elegans Hypothetical
protein C15B12.8 protein.
Length = 385
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 239 DTQKQELEKLLNSLSLMWSCTGKLVLSLLG 328
+ +K+ EKL N L L+W+ TG V S+ G
Sbjct: 75 ELEKKRGEKLWNKLGLLWAATGNQVDSISG 104
>AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans
nonsense-mediated mRNA decay trans-acting factor
protein.
Length = 1069
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 271 ELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
EL + ++ +Q+ P L+ GPPG GKT+++ + +H
Sbjct: 445 ELNSSQMQAVKQVLTRPLS--LIQGPPGTGKTVVSATIVYH 483
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 340 YGPPGCGKTMLAKAVAHHTTAAFIR 414
+GPPG GKT +AK++A + R
Sbjct: 511 HGPPGVGKTSIAKSIATALNREYFR 535
>AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 2 protein.
Length = 1069
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +1
Query: 271 ELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
EL + ++ +Q+ P L+ GPPG GKT+++ + +H
Sbjct: 445 ELNSSQMQAVKQVLTRPLS--LIQGPPGTGKTVVSATIVYH 483
>AF039052-8|AAF98631.1| 448|Caenorhabditis elegans Ruvb
(recombination protein) homologprotein 2 protein.
Length = 448
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 325 RGVLMYGPPGCGKTMLAKAVAHH--TTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLA 489
R +L+ G PG GKT +A A++ F+ +V SE + + + + FR A
Sbjct: 67 RALLVTGEPGAGKTAIAIAISKELGEDTPFVSIVASEIYSNEINKTEALTQ-AFRRA 122
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 325 RGVLMYGPPGCGKTMLAKAVAHH--TTAAFIRVVGSE 429
R VL+ GPP GKT +A A++ F+ +V SE
Sbjct: 83 RAVLIAGPPATGKTAIALAMSQELGDGVPFVPLVASE 119
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVAHHT-TAAFIRVVGSEFVQKYL 447
VL+ G PG GKT + + H+ ++ + +G +F K L
Sbjct: 14 VLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKIL 53
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVAHHT-TAAFIRVVGSEFVQKYL 447
VL+ G PG GKT + + H+ ++ + +G +F K L
Sbjct: 14 VLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKIL 53
>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
protein Y46G5A.1b protein.
Length = 1021
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/87 (26%), Positives = 34/87 (39%)
Frame = +2
Query: 44 TTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYS 223
T+ + Y R S DRE P H H ++ P + S ++ A YS
Sbjct: 97 TSSPSQYPRPPSR-DRESQPPPTQPRHHHHQPTVIHH-PIRSTGSPPVMMAPMSTSYDYS 154
Query: 224 DIGGMDTQKQELEKLLNSLSLMWSCTG 304
+KQEL++L S W+ G
Sbjct: 155 IGSSAGFRKQELDELHKSPGSRWAARG 181
>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
protein Y46G5A.1a protein.
Length = 1085
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/87 (26%), Positives = 34/87 (39%)
Frame = +2
Query: 44 TTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYS 223
T+ + Y R S DRE P H H ++ P + S ++ A YS
Sbjct: 97 TSSPSQYPRPPSR-DRESQPPPTQPRHHHHQPTVIHH-PIRSTGSPPVMMAPMSTSYDYS 154
Query: 224 DIGGMDTQKQELEKLLNSLSLMWSCTG 304
+KQEL++L S W+ G
Sbjct: 155 IGSSAGFRKQELDELHKSPGSRWAARG 181
>AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 2 protein.
Length = 334
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 289 VELYRQIGIEPP-RGVLMYGPPGCGKTMLAKAVA 387
VE + IG E +++ GPPGCGKT A+A
Sbjct: 31 VERLKVIGHEGNVPNIVLSGPPGCGKTTSVWALA 64
>AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform a protein.
Length = 1251
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 251 QELEKLLNS---LSLMWSCTGKLVLSLLGVCSCTDHQVVAKLCWLKL 382
+ L L+NS +SL++ C ++ L+ + + DH +LC KL
Sbjct: 261 EPLTNLINSTSAMSLLYECINTVIAVLISISAGGDHTASIQLCVQKL 307
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,712,191
Number of Sequences: 27780
Number of extensions: 351115
Number of successful extensions: 1200
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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