Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00455
(731 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 168 4e-42
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 130 7e-31
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 130 7e-31
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 124 6e-29
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 124 6e-29
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 120 1e-27
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 118 4e-27
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 118 4e-27
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 118 4e-27
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 118 5e-27
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 118 5e-27
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 97 8e-21
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 97 8e-21
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 97 8e-21
At3g56690.1 68416.m06306 calmodulin-binding protein identical to... 92 3e-19
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 86 3e-17
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 85 5e-17
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 85 6e-17
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 83 1e-16
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc... 83 2e-16
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 83 2e-16
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 82 4e-16
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 82 4e-16
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 81 6e-16
At3g02450.1 68416.m00232 cell division protein ftsH, putative si... 80 1e-15
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 79 3e-15
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 79 3e-15
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 79 4e-15
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 78 5e-15
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 78 5e-15
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 77 9e-15
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains... 77 1e-14
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 77 2e-14
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 76 2e-14
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 76 3e-14
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH... 76 3e-14
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 76 3e-14
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-... 76 3e-14
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 75 5e-14
At2g26140.1 68415.m03137 FtsH protease, putative contains simila... 74 9e-14
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 73 2e-13
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6... 72 3e-13
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6... 72 3e-13
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ... 72 5e-13
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 71 6e-13
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 71 6e-13
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 71 8e-13
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-... 71 1e-12
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 71 1e-12
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 70 1e-12
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 70 1e-12
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI... 69 2e-12
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 59 3e-09
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains... 59 3e-09
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 58 5e-09
At1g79560.1 68414.m09275 FtsH protease, putative contains simila... 51 9e-07
At3g04340.1 68416.m00459 FtsH protease family protein similar to... 50 2e-06
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 44 1e-04
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 44 1e-04
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 43 2e-04
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 42 3e-04
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 42 4e-04
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 42 4e-04
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 42 4e-04
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 42 6e-04
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 41 7e-04
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 41 7e-04
At5g17760.2 68418.m02083 AAA-type ATPase family protein contains... 40 0.001
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 40 0.001
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 40 0.002
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 40 0.002
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 39 0.003
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains... 39 0.003
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains... 39 0.003
At3g28520.1 68416.m03562 AAA-type ATPase family protein contains... 39 0.004
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 39 0.004
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 38 0.005
At5g17750.1 68418.m02081 AAA-type ATPase family protein contains... 37 0.016
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains... 37 0.016
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 37 0.016
At4g30250.1 68417.m04301 AAA-type ATPase family protein contains... 36 0.021
At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam pr... 36 0.021
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains... 36 0.021
At2g37280.1 68415.m04573 ABC transporter family protein similar ... 36 0.028
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 35 0.064
At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP1... 35 0.064
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 34 0.085
At4g24710.1 68417.m03536 AAA-type ATPase family protein similar ... 34 0.085
At4g15230.1 68417.m02333 ABC transporter family protein similar ... 34 0.085
At4g15215.1 68417.m02332 ABC transporter family protein similar ... 34 0.085
At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP1... 34 0.085
At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding ... 34 0.11
At4g15236.1 68417.m02335 ABC transporter family protein similar ... 34 0.11
At3g53480.1 68416.m05904 ABC transporter family protein PDR5-lik... 34 0.11
At2g46620.1 68415.m05815 AAA-type ATPase family protein contains... 33 0.15
At1g21690.2 68414.m02715 replication factor C 37 kDa, putative S... 33 0.20
At1g21690.1 68414.m02714 replication factor C 37 kDa, putative S... 33 0.20
At4g05340.1 68417.m00816 hypothetical protein 33 0.26
At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding ... 32 0.34
At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR... 32 0.34
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 32 0.34
At5g22330.1 68418.m02605 TATA box-binding protein-interacting pr... 31 0.60
At4g15233.1 68417.m02334 ABC transporter family protein similar ... 31 0.60
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 31 0.60
At5g17890.1 68418.m02098 LIM domain-containing protein / disease... 31 0.79
At2g36380.1 68415.m04464 ABC transporter family protein related ... 31 0.79
At1g06720.1 68414.m00714 expressed protein contains Pfam domain,... 31 0.79
At2g22050.1 68415.m02619 kelch repeat-containing F-box family pr... 31 1.0
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 31 1.0
At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding ... 30 1.4
At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR... 30 1.4
At5g45050.2 68418.m05524 disease resistance protein-related simi... 30 1.4
At5g45050.1 68418.m05523 disease resistance protein-related simi... 30 1.4
At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding ... 30 1.4
At3g16340.1 68416.m02066 ABC transporter family protein similar ... 30 1.4
At2g25530.1 68415.m03056 AFG1-like ATPase family protein contain... 30 1.4
At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identic... 30 1.8
At1g66950.1 68414.m07612 ABC transporter family protein similar ... 30 1.8
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 29 2.4
At4g28070.1 68417.m04026 AFG1-like ATPase family protein contain... 29 2.4
At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP1... 29 2.4
At2g29940.1 68415.m03642 ABC transporter family protein similar ... 29 2.4
At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial (... 29 3.2
At5g47010.1 68418.m05794 RNA helicase, putative similar to type ... 29 3.2
At3g05780.1 68416.m00649 Lon protease, putative similar to Lon p... 29 3.2
At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS cla... 29 3.2
At1g77470.1 68414.m09021 replication factor C 36 kDA, putative s... 29 3.2
At1g60180.1 68414.m06779 hypothetical protein similar to hypothe... 29 4.2
At1g59870.1 68414.m06745 ABC transporter family protein similar ... 29 4.2
At1g15210.1 68414.m01818 ABC transporter family protein Similar ... 29 4.2
At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding ... 28 5.6
At2g26910.1 68415.m03228 ABC transporter family protein similar ... 28 5.6
At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR... 28 5.6
At1g78310.1 68414.m09126 VQ motif-containing protein contains PF... 28 5.6
At1g24290.1 68414.m03065 AAA-type ATPase family protein similar ... 28 5.6
At1g15520.1 68414.m01867 ABC transporter family protein similar ... 28 5.6
At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR... 28 7.3
At5g04130.2 68418.m00400 DNA topoisomerase, ATP-hydrolyzing, put... 28 7.3
At5g04130.1 68418.m00399 DNA topoisomerase, ATP-hydrolyzing, put... 28 7.3
At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-lik... 28 7.3
At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-lik... 28 7.3
At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-lik... 28 7.3
At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR... 28 7.3
At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR... 28 7.3
At5g66910.1 68418.m08434 disease resistance protein (CC-NBS-LRR ... 27 9.7
At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR... 27 9.7
At5g44510.1 68418.m05453 disease resistance protein (TIR-NBS-LRR... 27 9.7
At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR... 27 9.7
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 27 9.7
At4g30490.1 68417.m04329 AFG1-like ATPase family protein contain... 27 9.7
At1g73170.1 68414.m08466 expressed protein 27 9.7
At1g66330.2 68414.m07533 senescence-associated family protein si... 27 9.7
At1g66330.1 68414.m07532 senescence-associated family protein si... 27 9.7
At1g63160.1 68414.m07138 replication factor C 40 kDa, putative s... 27 9.7
At1g21840.1 68414.m02733 expressed protein weak similarity to SP... 27 9.7
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 168 bits (408), Expect = 4e-42
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K IREAVELPLTH ELY+QIGI+PPRGVL+YGPPG GKTMLAKAVA+HTTAAFIRVVGS
Sbjct: 164 KQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGS 223
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EFVQKYLGEGPRMVRDVFRLAKEN+PAI
Sbjct: 224 EFVQKYLGEGPRMVRDVFRLAKENAPAI 251
Score = 153 bits (370), Expect = 2e-37
Identities = 72/88 (81%), Positives = 79/88 (89%)
Frame = +2
Query: 2 FLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSI 181
F+E VDQN GIVGSTTGSNYYVRILSTI+RELLKPSASVALH+HSNALVDVLPPEADSSI
Sbjct: 82 FMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSI 141
Query: 182 SMLQADEKPDVQYSDIGGMDTQKQELEK 265
S+L EKPDV Y+DIGG D QKQE+ +
Sbjct: 142 SLLSQSEKPDVSYNDIGGCDIQKQEIRE 169
Score = 149 bits (361), Expect = 2e-36
Identities = 72/85 (84%), Positives = 76/85 (89%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + P+ IFIDE+DAIAT RFDAQTGADREVQRIL+ELLNQMDGFDQT NVKVIMA
Sbjct: 241 FRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMA 300
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNRADTLDPALLRPGRLDRKIEFPL
Sbjct: 301 TNRADTLDPALLRPGRLDRKIEFPL 325
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 130 bits (315), Expect = 7e-31
Identities = 57/85 (67%), Positives = 75/85 (88%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
I+EAVELPLTH ELY IGI+PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +
Sbjct: 200 IKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELI 259
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
QKYLG+GP++VR++FR+A + SP+I
Sbjct: 260 QKYLGDGPKLVRELFRVADDLSPSI 284
Score = 124 bits (299), Expect = 6e-29
Identities = 55/77 (71%), Positives = 68/77 (88%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLD 680
PS +FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LD
Sbjct: 282 PSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLD 341
Query: 681 PALLRPGRLDRKIEFPL 731
PALLRPGR+DRKIEFPL
Sbjct: 342 PALLRPGRIDRKIEFPL 358
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/86 (37%), Positives = 56/86 (65%)
Frame = +2
Query: 8 EAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISM 187
E +D+N IV S+ G YYV ILS +D++ L+P S+ +H ++V +L E D +S+
Sbjct: 117 ELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSV 176
Query: 188 LQADEKPDVQYSDIGGMDTQKQELEK 265
++ ++ P Y+DIGG++ Q QE+++
Sbjct: 177 MKVEKAPLESYADIGGLEAQIQEIKE 202
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 130 bits (315), Expect = 7e-31
Identities = 57/85 (67%), Positives = 75/85 (88%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
I+EAVELPLTH ELY IGI+PP+GV++YG PG GKT+LAKAVA+ T+A F+RVVGSE +
Sbjct: 200 IKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELI 259
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
QKYLG+GP++VR++FR+A + SP+I
Sbjct: 260 QKYLGDGPKLVRELFRVADDLSPSI 284
Score = 124 bits (299), Expect = 6e-29
Identities = 55/77 (71%), Positives = 68/77 (88%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLD 680
PS +FIDEIDA+ TKR+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LD
Sbjct: 282 PSIVFIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLD 341
Query: 681 PALLRPGRLDRKIEFPL 731
PALLRPGR+DRKIEFPL
Sbjct: 342 PALLRPGRIDRKIEFPL 358
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/86 (37%), Positives = 56/86 (65%)
Frame = +2
Query: 8 EAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISM 187
E +D+N IV S+ G YYV ILS +D++ L+P S+ +H ++V +L E D +S+
Sbjct: 117 ELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSV 176
Query: 188 LQADEKPDVQYSDIGGMDTQKQELEK 265
++ ++ P Y+DIGG++ Q QE+++
Sbjct: 177 MKVEKAPLESYADIGGLEAQIQEIKE 202
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 124 bits (299), Expect = 6e-29
Identities = 53/85 (62%), Positives = 70/85 (82%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
I+E +ELP+ H EL+ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE V
Sbjct: 173 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 232
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
QKY+GEG RMVR++F +A+E++P+I
Sbjct: 233 QKYIGEGSRMVRELFVMAREHAPSI 257
Score = 105 bits (251), Expect = 4e-23
Identities = 50/85 (58%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQTTNVKVIM 653
F + PS IF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF+ + +KV+M
Sbjct: 247 FVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLM 306
Query: 654 ATNRADTLDPALLRPGRLDRKIEFP 728
ATNR D LD ALLRPGR+DRKIEFP
Sbjct: 307 ATNRIDILDQALLRPGRIDRKIEFP 331
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/89 (31%), Positives = 49/89 (55%)
Frame = +2
Query: 5 LEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSIS 184
++ + +N +V Y V I +ID L PS VAL S L VLP + D ++
Sbjct: 89 VKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVN 148
Query: 185 MLQADEKPDVQYSDIGGMDTQKQELEKLL 271
+++ ++ PD Y IGG+D Q +E+++++
Sbjct: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVI 177
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 124 bits (299), Expect = 6e-29
Identities = 53/85 (62%), Positives = 70/85 (82%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
I+E +ELP+ H EL+ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE V
Sbjct: 173 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 232
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
QKY+GEG RMVR++F +A+E++P+I
Sbjct: 233 QKYIGEGSRMVRELFVMAREHAPSI 257
Score = 105 bits (251), Expect = 4e-23
Identities = 50/85 (58%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQTTNVKVIM 653
F + PS IF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF+ + +KV+M
Sbjct: 247 FVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLM 306
Query: 654 ATNRADTLDPALLRPGRLDRKIEFP 728
ATNR D LD ALLRPGR+DRKIEFP
Sbjct: 307 ATNRIDILDQALLRPGRIDRKIEFP 331
Score = 50.8 bits (116), Expect = 9e-07
Identities = 27/89 (30%), Positives = 49/89 (55%)
Frame = +2
Query: 5 LEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSIS 184
++ + +N +V Y V I +ID + PS VAL S L VLP + D ++
Sbjct: 89 VKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVN 148
Query: 185 MLQADEKPDVQYSDIGGMDTQKQELEKLL 271
+++ ++ PD Y IGG+D Q +E+++++
Sbjct: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVI 177
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 120 bits (289), Expect = 1e-27
Identities = 58/85 (68%), Positives = 65/85 (76%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + QP IF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMA
Sbjct: 225 FNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMA 284
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR D LDPALLRPGRLDRKIE PL
Sbjct: 285 TNRPDVLDPALLRPGRLDRKIEIPL 309
Score = 107 bits (256), Expect = 1e-23
Identities = 43/85 (50%), Positives = 67/85 (78%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
+RE++ELPL + EL+ ++GI+PP+GVL+YGPPG GKT+LA+A+A + A F++VV S +
Sbjct: 151 LRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAII 210
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
KY+GE R++R++F A+E+ P I
Sbjct: 211 DKYIGESARLIREMFNYAREHQPCI 235
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 118 bits (284), Expect = 4e-27
Identities = 57/85 (67%), Positives = 64/85 (75%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + QP IF+DEIDAI +RF T ADRE+QR L+ELLNQ+DGFD VK+IMA
Sbjct: 225 FNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMA 284
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR D LDPALLRPGRLDRKIE PL
Sbjct: 285 TNRPDVLDPALLRPGRLDRKIEIPL 309
Score = 107 bits (256), Expect = 1e-23
Identities = 43/85 (50%), Positives = 67/85 (78%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
+RE++ELPL + EL+ ++GI+PP+GVL+YGPPG GKT+LA+A+A + A F++VV S +
Sbjct: 151 LRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAII 210
Query: 436 QKYLGEGPRMVRDVFRLAKENSPAI 510
KY+GE R++R++F A+E+ P I
Sbjct: 211 DKYIGESARLIREMFNYAREHQPCI 235
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 118 bits (284), Expect = 4e-27
Identities = 56/84 (66%), Positives = 64/84 (76%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + + P IFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF +KVI A
Sbjct: 257 FQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAA 316
Query: 657 TNRADTLDPALLRPGRLDRKIEFP 728
TNRAD LDPAL+R GRLDRKIEFP
Sbjct: 317 TNRADILDPALMRSGRLDRKIEFP 340
Score = 107 bits (256), Expect = 1e-23
Identities = 42/83 (50%), Positives = 64/83 (77%)
Frame = +1
Query: 262 EAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK 441
EA+ LP+TH E + ++G+ PP+GVL+YGPPG GKT++A+A A T A F+++ G + VQ
Sbjct: 185 EAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 244
Query: 442 YLGEGPRMVRDVFRLAKENSPAI 510
++G+G ++VRD F+LAKE +P I
Sbjct: 245 FIGDGAKLVRDAFQLAKEKAPCI 267
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/76 (35%), Positives = 47/76 (61%)
Frame = +2
Query: 32 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPD 211
++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + ++ DEKP
Sbjct: 108 VLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 167
Query: 212 VQYSDIGGMDTQKQEL 259
Y+DIGG++ Q QEL
Sbjct: 168 EDYNDIGGLEKQIQEL 183
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 118 bits (284), Expect = 4e-27
Identities = 52/86 (60%), Positives = 69/86 (80%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF 432
+IRE VELP+ H E + ++GI+PP+GVL YGPPG GKT++A+AVA+ T A FIRVVGSE
Sbjct: 216 KIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSEL 275
Query: 433 VQKYLGEGPRMVRDVFRLAKENSPAI 510
VQKY+GEG RMVR++F++A+ I
Sbjct: 276 VQKYIGEGARMVRELFQMARSKKACI 301
Score = 107 bits (256), Expect = 1e-23
Identities = 50/74 (67%), Positives = 58/74 (78%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 689
+F DEIDAI RFD G+D EVQR +LE+L Q+DGFD N+KV+MATNR D LDPAL
Sbjct: 302 LFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPAL 361
Query: 690 LRPGRLDRKIEFPL 731
LRPGRLDRK+EF L
Sbjct: 362 LRPGRLDRKVEFCL 375
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = +2
Query: 155 LPPEADSSISMLQADEKPDVQYSDIGGMDTQKQELEKLLNSLSL 286
LPP+ D S++M+ +EKPD YSDIGG K+++EK+ + L
Sbjct: 183 LPPKIDPSVTMMTVEEKPDATYSDIGGC---KEQIEKIREVVEL 223
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 118 bits (283), Expect = 5e-27
Identities = 51/86 (59%), Positives = 69/86 (80%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF 432
++RE VELP+ H E + ++GI+PP+GVL YGPPG GKT+LA+AVA+ T A FIRV+GSE
Sbjct: 179 KMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSEL 238
Query: 433 VQKYLGEGPRMVRDVFRLAKENSPAI 510
VQKY+GEG RMVR++F++A+ I
Sbjct: 239 VQKYVGEGARMVRELFQMARSKKACI 264
Score = 111 bits (267), Expect = 5e-25
Identities = 50/74 (67%), Positives = 59/74 (79%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 689
+F DE+DAI RFD G D EVQR +LE++NQ+DGFD N+KV+MATNR DTLDPAL
Sbjct: 265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPAL 324
Query: 690 LRPGRLDRKIEFPL 731
LRPGRLDRK+EF L
Sbjct: 325 LRPGRLDRKVEFGL 338
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 155 LPPEADSSISMLQADEKPDVQYSDIGGMDTQKQELEKLLNSLSL 286
LPP+ D S++M+ +EKPDV Y+D+GG K+++EK+ + L
Sbjct: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGC---KEQIEKMREVVEL 186
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 118 bits (283), Expect = 5e-27
Identities = 55/80 (68%), Positives = 63/80 (78%)
Frame = +3
Query: 489 QREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRA 668
+ + P IFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF +KVI ATNRA
Sbjct: 260 KEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRA 319
Query: 669 DTLDPALLRPGRLDRKIEFP 728
D LDPAL+R GRLDRKIEFP
Sbjct: 320 DILDPALMRSGRLDRKIEFP 339
Score = 107 bits (257), Expect = 7e-24
Identities = 44/83 (53%), Positives = 63/83 (75%)
Frame = +1
Query: 262 EAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK 441
EA+ LP+TH E + ++GI PP+GVL+YGPPG GKT++A+A A T A F+++ G + VQ
Sbjct: 184 EAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
Query: 442 YLGEGPRMVRDVFRLAKENSPAI 510
++G+G ++VRD F LAKE SP I
Sbjct: 244 FIGDGAKLVRDAFLLAKEKSPCI 266
Score = 63.7 bits (148), Expect = 1e-10
Identities = 27/76 (35%), Positives = 47/76 (61%)
Frame = +2
Query: 32 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPD 211
++ ++T ++ ++ +D + LKP V ++K S ++D LP E DS + ++ DEKP
Sbjct: 107 VLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPT 166
Query: 212 VQYSDIGGMDTQKQEL 259
Y+DIGG++ Q QEL
Sbjct: 167 EDYNDIGGLEKQIQEL 182
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 97.5 bits (232), Expect = 8e-21
Identities = 42/86 (48%), Positives = 62/86 (72%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF 432
+IRE VELPL H +L++ IG++PP+G+L+YGPPG GKT++A+AVA+ T A F + G E
Sbjct: 218 QIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEI 277
Query: 433 VQKYLGEGPRMVRDVFRLAKENSPAI 510
+ K GE +R F A++N+P+I
Sbjct: 278 MSKLAGESESNLRKAFEEAEKNAPSI 303
Score = 91.1 bits (216), Expect = 7e-19
Identities = 38/88 (43%), Positives = 58/88 (65%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++E V+ P+ H E + + G+ P +GVL YGPPGCGKT+LAKA+A+ A FI V G
Sbjct: 489 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGP 548
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + + GE VR++F A++++P +
Sbjct: 549 ELLTMWFGESEANVREIFDKARQSAPCV 576
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/85 (44%), Positives = 53/85 (62%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F ++ P +F DE+D+IAT+R ++ A R+L +LL +MDG + V +I A
Sbjct: 566 FDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGA 625
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR D +D ALLRPGRLD+ I PL
Sbjct: 626 TNRPDIIDSALLRPGRLDQLIYIPL 650
Score = 68.9 bits (161), Expect = 3e-12
Identities = 39/82 (47%), Positives = 54/82 (65%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F ++ PS IFIDEID+IA KR +T + E +RI+ +LL MDG +V V+ A
Sbjct: 293 FEEAEKNAPSIIFIDEIDSIAPKR--EKTNGEVE-RRIVSQLLTLMDGLKSRAHVIVMGA 349
Query: 657 TNRADTLDPALLRPGRLDRKIE 722
TNR +++DPAL R GR DR+I+
Sbjct: 350 TNRPNSIDPALRRFGRFDREID 371
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +2
Query: 80 TIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEL 259
+ID E+L A H H+ AL + P ++ E P+V + DIGG++ K+EL
Sbjct: 439 SIDAEILNSMAVSNEHFHT-ALGNSNPSALRETVV-----EVPNVSWEDIGGLENVKREL 492
Query: 260 EK 265
++
Sbjct: 493 QE 494
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 97.5 bits (232), Expect = 8e-21
Identities = 42/86 (48%), Positives = 62/86 (72%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF 432
+IRE VELPL H +L++ IG++PP+G+L+YGPPG GKT++A+AVA+ T A F + G E
Sbjct: 219 QIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEI 278
Query: 433 VQKYLGEGPRMVRDVFRLAKENSPAI 510
+ K GE +R F A++N+P+I
Sbjct: 279 MSKLAGESESNLRKAFEEAEKNAPSI 304
Score = 90.6 bits (215), Expect = 9e-19
Identities = 37/88 (42%), Positives = 58/88 (65%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++E V+ P+ H E + + G+ P +GVL YGPPGCGKT+LAKA+A+ A FI + G
Sbjct: 490 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 549
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + + GE VR++F A++++P +
Sbjct: 550 ELLTMWFGESEANVREIFDKARQSAPCV 577
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/85 (45%), Positives = 54/85 (63%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F ++ P +F DE+D+IAT+R ++ A R+L +LL +MDG + V +I A
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGA 626
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR D +DPALLRPGRLD+ I PL
Sbjct: 627 TNRPDIIDPALLRPGRLDQLIYIPL 651
Score = 68.1 bits (159), Expect = 6e-12
Identities = 38/82 (46%), Positives = 51/82 (62%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F ++ PS IFIDEID+IA KR +R RI+ +LL MDG +V V+ A
Sbjct: 294 FEEAEKNAPSIIFIDEIDSIAPKREKTHGEVER---RIVSQLLTLMDGLKSRAHVIVMGA 350
Query: 657 TNRADTLDPALLRPGRLDRKIE 722
TNR +++DPAL R GR DR+I+
Sbjct: 351 TNRPNSIDPALRRFGRFDREID 372
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 200 EKPDVQYSDIGGMDTQKQELEK 265
E P+V + DIGG++ K+EL++
Sbjct: 474 EVPNVSWEDIGGLENVKRELQE 495
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 97.5 bits (232), Expect = 8e-21
Identities = 42/86 (48%), Positives = 62/86 (72%)
Frame = +1
Query: 253 RIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEF 432
+IRE VELPL H +L++ IG++PP+G+L+YGPPG GKT++A+AVA+ T A F + G E
Sbjct: 218 QIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEI 277
Query: 433 VQKYLGEGPRMVRDVFRLAKENSPAI 510
+ K GE +R F A++N+P+I
Sbjct: 278 MSKLAGESESNLRKAFEEAEKNAPSI 303
Score = 91.1 bits (216), Expect = 7e-19
Identities = 38/88 (43%), Positives = 58/88 (65%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++E V+ P+ H E + + G+ P +GVL YGPPGCGKT+LAKA+A+ A FI V G
Sbjct: 489 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGP 548
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + + GE VR++F A++++P +
Sbjct: 549 ELLTMWFGESEANVREIFDKARQSAPCV 576
Score = 72.1 bits (169), Expect = 3e-13
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQTTNVKVIM 653
F ++ P +F DE+D+IAT+R G R+L +LL +MDG + V +I
Sbjct: 566 FDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIG 625
Query: 654 ATNRADTLDPALLRPGRLDRKIEFPL 731
ATNR D +D ALLRPGRLD+ I PL
Sbjct: 626 ATNRPDIIDSALLRPGRLDQLIYIPL 651
Score = 68.9 bits (161), Expect = 3e-12
Identities = 39/82 (47%), Positives = 54/82 (65%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F ++ PS IFIDEID+IA KR +T + E +RI+ +LL MDG +V V+ A
Sbjct: 293 FEEAEKNAPSIIFIDEIDSIAPKR--EKTNGEVE-RRIVSQLLTLMDGLKSRAHVIVMGA 349
Query: 657 TNRADTLDPALLRPGRLDRKIE 722
TNR +++DPAL R GR DR+I+
Sbjct: 350 TNRPNSIDPALRRFGRFDREID 371
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 80 TIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQEL 259
+ID E+L A H H+ AL + P ++ E P+V ++DIGG++ K+EL
Sbjct: 439 SIDAEILNSMAVTNEHFHT-ALGNSNPSALRETVV-----EVPNVSWNDIGGLENVKREL 492
Query: 260 EK 265
++
Sbjct: 493 QE 494
>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
calmodulin-binding protein GI:6760428 from [Arabidopsis
thaliana]
Length = 1022
Score = 92.3 bits (219), Expect = 3e-19
Identities = 39/88 (44%), Positives = 58/88 (65%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++ EAVE P H + +++IG PP G+LM+GPPGC KT++A+AVA F+ V G
Sbjct: 733 KNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGP 792
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E K++GE + VR +F A+ N+P+I
Sbjct: 793 ELFSKWVGESEKAVRSLFAKARANAPSI 820
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F S P+ +FID++DAIA R + G + QR++ LLN MDG +T V VI A
Sbjct: 470 FRSASNATPAVVFIDDLDAIAPAR---KEGGEELSQRMVATLLNLMDGISRTDGVVVIAA 526
Query: 657 TNRADTLDPALLRPGRLDRKIE 722
TNR D+++PAL RPGRLDR+IE
Sbjct: 527 TNRPDSIEPALRRPGRLDREIE 548
Score = 70.9 bits (166), Expect = 8e-13
Identities = 30/68 (44%), Positives = 44/68 (64%)
Frame = +1
Query: 307 IGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRL 486
+G+ P +GVL++GPPG GKT LA+ A H+ F V G E + +YLGE + + +VFR
Sbjct: 413 LGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRS 472
Query: 487 AKENSPAI 510
A +PA+
Sbjct: 473 ASNATPAV 480
Score = 68.1 bits (159), Expect = 6e-12
Identities = 36/79 (45%), Positives = 46/79 (58%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + PS IF DEID++A+ R G R++ +LL ++DG Q V VI A
Sbjct: 810 FAKARANAPSIIFFDEIDSLASIRGKENDGVSVS-DRVMSQLLVELDGLHQRVGVTVIAA 868
Query: 657 TNRADTLDPALLRPGRLDR 713
TNR D +D ALLRPGR DR
Sbjct: 869 TNRPDKIDSALLRPGRFDR 887
>At4g23940.1 68417.m03443 FtsH protease, putative contains
similarity to zinc dependent protease GI:7650138 from
[Arabidopsis thaliana]
Length = 946
Score = 85.8 bits (203), Expect = 3e-17
Identities = 36/77 (46%), Positives = 55/77 (71%)
Frame = +1
Query: 280 LTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGP 459
L + +L+ ++GI+PP GVL+ GPPGCGKT++AKA+A F ++ GSEFV+ +G G
Sbjct: 449 LKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVLVGVGS 508
Query: 460 RMVRDVFRLAKENSPAI 510
+RD+F+ AK N P++
Sbjct: 509 ARIRDLFKRAKVNKPSV 525
Score = 72.9 bits (171), Expect = 2e-13
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKR---FDAQT-----GADREVQRILLELLNQMDGFDQT 632
F + +PS IFIDEIDA+AT+R F + A +E + L +LL ++DGFD
Sbjct: 515 FKRAKVNKPSVIFIDEIDALATRRQGIFKENSDQLYNAATQERETTLNQLLIELDGFDTG 574
Query: 633 TNVKVIMATNRADTLDPALLRPGRLDRKI 719
V + ATNR D LDPALLRPGR DRKI
Sbjct: 575 KGVIFLGATNRRDLLDPALLRPGRFDRKI 603
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 85.0 bits (201), Expect = 5e-17
Identities = 40/88 (45%), Positives = 55/88 (62%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
KT I + V+LPL H +L+ G+ GVL+YGPPG GKT+LAKAVA + F+ V G
Sbjct: 667 KTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGP 725
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + Y+GE + VRD+F A+ P +
Sbjct: 726 ELINMYIGESEKNVRDIFEKARSARPCV 753
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF-DQTTNVKVIM 653
F + +P IF DE+D++A R A + + R++ ++L ++DG D + ++ +I
Sbjct: 743 FEKARSARPCVIFFDELDSLAPAR-GASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIG 801
Query: 654 ATNRADTLDPALLRPGRLDR 713
A+NR D +DPALLRPGR D+
Sbjct: 802 ASNRPDLIDPALLRPGRFDK 821
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 84.6 bits (200), Expect = 6e-17
Identities = 37/88 (42%), Positives = 59/88 (67%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++++AVE P+ H + ++GI P RG+L++GPPGC KT LAKA A+ A+F + +
Sbjct: 295 KKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCA 354
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E Y+GEG ++R+ F+ A+ SP+I
Sbjct: 355 ELFSMYVGEGEALLRNTFQRARLASPSI 382
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREV-QRILLELLNQMDGFDQTTNVKVIM 653
F + PS IF DE D +A KR D + V +R+L LL +MDG ++ + V+
Sbjct: 372 FQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLA 431
Query: 654 ATNRADTLDPALLRPGRLDRKIEFP 728
ATNR +D AL+RPGR D + P
Sbjct: 432 ATNRPYAIDAALMRPGRFDLVLYVP 456
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +3
Query: 495 EQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADT 674
++PS IFIDEID + +R DA+ D + L L++ V V+ +TNR D
Sbjct: 118 DKPSVIFIDEIDVLCPRR-DARREQDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDA 176
Query: 675 LDPALLRPGRLDRKIE 722
+DPAL R GR D +E
Sbjct: 177 IDPALRRAGRFDALVE 192
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFV 435
+RE + P + R +G++ PRG+L+YGPPG GKT L +AV A I +
Sbjct: 34 LRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVH 93
Query: 436 QKYLGEGPRMVRDVFRLAKENS 501
+ + GE +++R+ F A ++
Sbjct: 94 RAHAGESEKVLREAFAEASSHA 115
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 83.4 bits (197), Expect = 1e-16
Identities = 41/88 (46%), Positives = 55/88 (62%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K E VE L E + +G + P+GVL+ GPPG GKT+LAKA+A F + GS
Sbjct: 236 KQDFMEVVEF-LKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGS 294
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EFV+ ++G G VRD+F+ AKEN+P I
Sbjct: 295 EFVEMFVGVGASRVRDLFKKAKENAPCI 322
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/81 (46%), Positives = 52/81 (64%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + P +F+DEIDA+ +R G + E ++ L +LL +MDGF+ T V V+ A
Sbjct: 312 FKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAA 371
Query: 657 TNRADTLDPALLRPGRLDRKI 719
TNRAD LD ALLRPGR DR++
Sbjct: 372 TNRADILDSALLRPGRFDRQV 392
>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 685
Score = 83.0 bits (196), Expect = 2e-16
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K E VE L E + +G P+GVL+ GPPG GKT+LAKA+A F + GS
Sbjct: 229 KQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS 287
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EFV+ ++G G VRD+F+ AKEN+P I
Sbjct: 288 EFVEMFVGVGASRVRDLFKKAKENAPCI 315
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/81 (46%), Positives = 52/81 (64%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + P +F+DEIDA+ +R G + E ++ L +LL +MDGF+ T V V+ A
Sbjct: 305 FKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAA 364
Query: 657 TNRADTLDPALLRPGRLDRKI 719
TNRAD LD ALLRPGR DR++
Sbjct: 365 TNRADILDSALLRPGRFDRQV 385
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 82.6 bits (195), Expect = 2e-16
Identities = 43/88 (48%), Positives = 55/88 (62%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + E VE L + E Y ++G PPRGVL+ G PG GKT+LAKAVA FI S
Sbjct: 334 KEELEEIVEF-LRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSAS 392
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EFV+ Y+G G VRD+F AK+ +P+I
Sbjct: 393 EFVELYVGMGASRVRDLFARAKKEAPSI 420
Score = 82.6 bits (195), Expect = 2e-16
Identities = 43/82 (52%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDA-QTGADREVQRILLELLNQMDGFDQTTNVKVIM 653
F ++E PS IFIDEIDA+A R + G++ E ++ L +LL +MDGFD + V V+
Sbjct: 410 FARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDGFDSNSAVIVLG 469
Query: 654 ATNRADTLDPALLRPGRLDRKI 719
ATNRAD LDPAL RPGR DR +
Sbjct: 470 ATNRADVLDPALRRPGRFDRVV 491
>At5g58870.1 68418.m07376 FtsH protease, putative contains
similarity to cell division protein FtsH homolog 3
SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
sp.}
Length = 806
Score = 81.8 bits (193), Expect = 4e-16
Identities = 42/88 (47%), Positives = 56/88 (63%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + E VE L + + Y ++G PPRGVL+ G PG GKT+LAKAVA + FI S
Sbjct: 338 KEELEEIVEF-LKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCSAS 396
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EFV+ Y+G G VRD+F AK+ +P+I
Sbjct: 397 EFVELYVGMGASRVRDLFARAKKEAPSI 424
Score = 79.4 bits (187), Expect = 2e-15
Identities = 42/82 (51%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDA-QTGADREVQRILLELLNQMDGFDQTTNVKVIM 653
F ++E PS IFIDEIDA+A R + ++ E ++ L +LL +MDGFD ++ V V+
Sbjct: 414 FARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDGFDSSSAVIVLG 473
Query: 654 ATNRADTLDPALLRPGRLDRKI 719
ATNRAD LDPAL RPGR DR +
Sbjct: 474 ATNRADVLDPALRRPGRFDRVV 495
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 81.8 bits (193), Expect = 4e-16
Identities = 40/89 (44%), Positives = 58/89 (65%)
Frame = +1
Query: 244 TKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 423
TK ++E V LPL +L++ ++P RG+L++GPPG GKTM+AKA+A+ A+FI V
Sbjct: 422 TKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMMAKAIANEAGASFINVSM 481
Query: 424 SEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
S K+ GE + VR +F LA + SP I
Sbjct: 482 STITSKWFGEDEKNVRALFTLAAKVSPTI 510
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF--DQTTNVKVI 650
F + P+ IF+DE+D++ +R + G +++I E + DG + + V+
Sbjct: 500 FTLAAKVSPTIIFVDEVDSMLGQR--TRVGEHEAMRKIKNEFMTHWDGLMSNAGDRILVL 557
Query: 651 MATNRADTLDPALLRPGRLDRKI 719
ATNR LD A++R R +R+I
Sbjct: 558 AATNRPFDLDEAIIR--RFERRI 578
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 81.4 bits (192), Expect = 6e-16
Identities = 38/91 (41%), Positives = 59/91 (64%)
Frame = +1
Query: 238 GYTKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 417
G + + E V+ TH E+YR+ G++ P G+L+ GPPG GKT+LAKAVA F +
Sbjct: 416 GKIRLELEEIVKF-FTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSI 474
Query: 418 VGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
S+FV+ Y+G G VR +++ A+EN+P++
Sbjct: 475 SASQFVEIYVGVGASRVRALYQEARENAPSV 505
Score = 71.3 bits (167), Expect = 6e-13
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
+ + PS +FIDE+DA+ +R + +E L +LL +DGF+ V I +
Sbjct: 495 YQEARENAPSVVFIDELDAVGRERGLIKGSGGQERDATLNQLLVSLDGFEGRGEVITIAS 554
Query: 657 TNRADTLDPALLRPGRLDRKIEFP 728
TNR D LDPAL+RPGR DRKI P
Sbjct: 555 TNRPDILDPALVRPGRFDRKIFIP 578
>At3g02450.1 68416.m00232 cell division protein ftsH, putative
similar to SWISS-PROT:P46469 cell division protein ftsH
homolog [Lactococcus lactis]; contains Pfam domain,
PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with
diverse cellular 'A'ctivities)
Length = 622
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = +1
Query: 298 YRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDV 477
Y+++G PRGVL+ GPPG GKT+LA+AVA F V SEFV+ ++G G +RD+
Sbjct: 359 YKKLGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDL 418
Query: 478 FRLAKENSPAI 510
F A++NSP+I
Sbjct: 419 FNAARKNSPSI 429
Score = 71.3 bits (167), Expect = 6e-13
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + ++ PS IFIDE+DA+ KR + E + L +LL +MDGF+ T V VI A
Sbjct: 419 FNAARKNSPSIIFIDELDAVGGKR---GRSFNDERDQTLNQLLTEMDGFESDTKVIVIAA 475
Query: 657 TNRADTLDPALLRPGRLDRKI 719
TNR + LD AL RPGR RK+
Sbjct: 476 TNRPEALDSALCRPGRFSRKV 496
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 79.0 bits (186), Expect = 3e-15
Identities = 40/88 (45%), Positives = 55/88 (62%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++E V LPL +L+ ++P RG+L++GPPG GKTMLAKA+A A+FI V S
Sbjct: 530 KESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMS 589
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
K+ GE + VR +F LA + SP I
Sbjct: 590 TITSKWFGEDEKNVRALFTLASKVSPTI 617
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF--DQTTNVKVI 650
F + P+ IF+DE+D++ +R + G +++I E ++ DG + V+
Sbjct: 607 FTLASKVSPTIIFVDEVDSMLGQR--TRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVL 664
Query: 651 MATNRADTLDPALLRPGRLDRKI 719
ATNR LD A++R R +R+I
Sbjct: 665 AATNRPFDLDEAIIR--RFERRI 685
Score = 31.5 bits (68), Expect = 0.60
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 220 FGYWRHGYTKTRIREAVELPLTHVELYRQI-GIEPP-RGVLMYGPPGCGKTMLAKAVAHH 393
F Y+ T+ + A + L H + + + P R +L+ GP + MLAKA+AH
Sbjct: 69 FPYYLSEQTRVLLTSAAYVHLKHFDASKYTRNLSPASRAILLSGPAELYQQMLAKALAHF 128
Query: 394 TTAAFIRVVGSEFVQK 441
A + + ++F K
Sbjct: 129 FDAKLLLLDVNDFALK 144
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 79.0 bits (186), Expect = 3e-15
Identities = 40/88 (45%), Positives = 55/88 (62%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++E V LPL +L+ ++P RG+L++GPPG GKTMLAKA+A A+FI V S
Sbjct: 525 KESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMS 584
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
K+ GE + VR +F LA + SP I
Sbjct: 585 TITSKWFGEDEKNVRALFTLASKVSPTI 612
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF--DQTTNVKVI 650
F + P+ IF+DE+D++ +R + G +++I E ++ DG + V+
Sbjct: 602 FTLASKVSPTIIFVDEVDSMLGQR--TRVGEHEAMRKIKNEFMSHWDGLMTKPGERILVL 659
Query: 651 MATNRADTLDPALLRPGRLDRKI 719
ATNR LD A++R R +R+I
Sbjct: 660 AATNRPFDLDEAIIR--RFERRI 680
Score = 31.5 bits (68), Expect = 0.60
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 220 FGYWRHGYTKTRIREAVELPLTHVELYRQI-GIEPP-RGVLMYGPPGCGKTMLAKAVAHH 393
F Y+ T+ + A + L H + + + P R +L+ GP + MLAKA+AH
Sbjct: 64 FPYYLSEQTRVLLTSAAYVHLKHFDASKYTRNLSPASRAILLSGPAELYQQMLAKALAHF 123
Query: 394 TTAAFIRVVGSEFVQK 441
A + + ++F K
Sbjct: 124 FDAKLLLLDVNDFALK 139
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam
profile PF00004: ATPase, AAA family
Length = 1122
Score = 78.6 bits (185), Expect = 4e-15
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPP-RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 423
K ++E V LPL EL+ + + P +G+L++GPPG GKTMLAKAVA A FI +
Sbjct: 829 KDILKELVMLPLQRPELFCKGELTKPCKGILLFGPPGTGKTMLAKAVAKEADANFINISM 888
Query: 424 SEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
S K+ GEG + V+ VF LA + SP++
Sbjct: 889 SSITSKWFGEGEKYVKAVFSLASKMSPSV 917
Score = 37.1 bits (82), Expect = 0.012
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKR-FDAQTGADREVQRILLELLNQMDGF--DQTTNVKV 647
F + PS IF+DE+D++ +R + A R+++ E + DG + V V
Sbjct: 907 FSLASKMSPSVIFVDEVDSMLGRREHPREHEASRKIKN---EFMMHWDGLTTQERERVLV 963
Query: 648 IMATNRADTLDPALLRPGRLDRKI 719
+ ATNR LD A++R RL R++
Sbjct: 964 LAATNRPFDLDEAVIR--RLPRRL 985
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 78.2 bits (184), Expect = 5e-15
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGI-EPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 423
K ++E V LPL EL+ + + +P +G+L++GPPG GKTMLAKAVA A FI +
Sbjct: 972 KETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISM 1031
Query: 424 SEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
S K+ GEG + V+ VF LA + +P++
Sbjct: 1032 SSITSKWFGEGEKYVKAVFSLASKIAPSV 1060
Score = 36.7 bits (81), Expect = 0.016
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF--DQTTNVKVIMATNRADT 674
PS IF+DE+D++ +R G ++++ E + DG V V+ ATNR
Sbjct: 1058 PSVIFVDEVDSMLGRR--ENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAATNRPFD 1115
Query: 675 LDPALLRPGRLDRKI 719
LD A++R RL R++
Sbjct: 1116 LDEAVIR--RLPRRL 1128
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 78.2 bits (184), Expect = 5e-15
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGI-EPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 423
K ++E V LPL EL+ + + +P +G+L++GPPG GKTMLAKAVA A FI +
Sbjct: 959 KDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVATEAGANFINISM 1018
Query: 424 SEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
S K+ GEG + V+ VF LA + +P++
Sbjct: 1019 SSITSKWFGEGEKYVKAVFSLASKIAPSV 1047
Score = 36.7 bits (81), Expect = 0.016
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF--DQTTNVKVIMATNRADT 674
PS IF+DE+D++ +R G ++++ E + DG V V+ ATNR
Sbjct: 1045 PSVIFVDEVDSMLGRR--ENPGEHEAMRKMKNEFMINWDGLRTKDKERVLVLAATNRPFD 1102
Query: 675 LDPALLRPGRLDRKI 719
LD A++R RL R++
Sbjct: 1103 LDEAVIR--RLPRRL 1115
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 77.4 bits (182), Expect = 9e-15
Identities = 39/88 (44%), Positives = 52/88 (59%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K E VE L E + +G + P+GVL+ GPPG GKT+LAKA+A F + GS
Sbjct: 232 KQDFEEIVEF-LKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGS 290
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EF++ ++G G RD+F AK NSP I
Sbjct: 291 EFIEMFVGVGASRARDLFNKAKANSPCI 318
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/85 (44%), Positives = 50/85 (58%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + P +FIDEIDA+ R G + E ++ L ++L +MDGF T V VI A
Sbjct: 308 FNKAKANSPCIVFIDEIDAVGRMRGTGIGGGNDEREQTLNQILTEMDGFAGNTGVIVIAA 367
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR + LD ALLRPGR DR++ L
Sbjct: 368 TNRPEILDSALLRPGRFDRQVSVGL 392
>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 820
Score = 77.0 bits (181), Expect = 1e-14
Identities = 30/78 (38%), Positives = 51/78 (65%)
Frame = +1
Query: 277 PLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEG 456
P+ ++Y+ G++ G L+YGPPGCGKT++AKA A+ A F+ + G+E + KY+GE
Sbjct: 547 PIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGES 606
Query: 457 PRMVRDVFRLAKENSPAI 510
+R +F+ A+ +P +
Sbjct: 607 ELAIRTLFQRARTCAPCV 624
Score = 71.3 bits (167), Expect = 6e-13
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +1
Query: 268 VELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL 447
V P+ + E +++IG++PP G+L +GPPGCGKT LA A+A+ F ++ +E +
Sbjct: 249 VLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVS 308
Query: 448 GEGPRMVRDVFRLAKENSPAI 510
G +R++F A +P+I
Sbjct: 309 GASEENIRELFSKAYRTAPSI 329
Score = 60.9 bits (141), Expect = 9e-10
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLD 680
P IF DE+DA+ T R + GA V+R+L + L ++DG ++ NV VI ATNR D +D
Sbjct: 622 PCVIFFDEVDALTTSR--GKEGA-WVVERLLNQFLVELDGGERR-NVYVIGATNRPDVVD 677
Query: 681 PALLRPGRLDRKIEFPL 731
PA LRPGR + PL
Sbjct: 678 PAFLRPGRFGNLLYVPL 694
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/91 (43%), Positives = 50/91 (54%), Gaps = 10/91 (10%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF---------DQ 629
F R PS +FIDEIDAI +KR + Q ++ RI+ +LL MDG D
Sbjct: 319 FSKAYRTAPSIVFIDEIDAIGSKRENQQREMEK---RIVTQLLTCMDGPGNKGDKNAPDS 375
Query: 630 TTN-VKVIMATNRADTLDPALLRPGRLDRKI 719
+ V VI ATNR D LDPAL R GR + +I
Sbjct: 376 SAGFVLVIGATNRPDALDPALRRSGRFETEI 406
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F ++ PS IFIDEIDAI R G + E + L +LL +MDGF T V V+
Sbjct: 407 FQEARQAAPSIIFIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMDGFGTTAGVVVLAG 466
Query: 657 TNRADTLDPALLRPGRLDRKI 719
TNR D LD ALLRPGR DR+I
Sbjct: 467 TNRPDILDKALLRPGRFDRQI 487
Score = 74.5 bits (175), Expect = 6e-14
Identities = 35/88 (39%), Positives = 56/88 (63%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K I E V L + + Y +G + P+G L+ GPPG GKT+LAKA A + F+ + GS
Sbjct: 331 KQEIMEFVHF-LKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGS 389
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
+F++ ++G GP VR +F+ A++ +P+I
Sbjct: 390 DFMEMFVGVGPSRVRHLFQEARQAAPSI 417
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 76.2 bits (179), Expect = 2e-14
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGI-EPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 423
K + E V LPL EL+ + P +GVL+YGPPG GKTMLAKA+A + A FI V
Sbjct: 96 KQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIARESEAVFINVKV 155
Query: 424 SEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
S + K+ G+ ++V VF LA + PAI
Sbjct: 156 SNLMSKWFGDAQKLVSAVFSLAYKLQPAI 184
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF--DQTTNVKVIMATNRAD 671
QP+ IFIDE+D+ +R A + + E + DGF DQ V V+ ATNR
Sbjct: 181 QPAIIFIDEVDSFLGQRRSTDNEA---MSNMKTEFMALWDGFTTDQNARVMVLAATNRPS 237
Query: 672 TLDPALLR 695
LD A+LR
Sbjct: 238 ELDEAILR 245
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 75.8 bits (178), Expect = 3e-14
Identities = 46/87 (52%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGAD-REVQRILLELLNQMDGFDQTTN-VKVI 650
F S + PS IFIDEIDAI +KR G E ++ LL++L +MDGF TT+ V VI
Sbjct: 401 FASSRSYAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTEMDGFKVTTSQVLVI 460
Query: 651 MATNRADTLDPALLRPGRLDRKIEFPL 731
ATNR D LDPALLR GR D+ I L
Sbjct: 461 GATNRLDILDPALLRKGRFDKIIRVGL 487
Score = 70.9 bits (166), Expect = 8e-13
Identities = 34/90 (37%), Positives = 56/90 (62%)
Frame = +1
Query: 241 YTKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVV 420
Y K ++E V + L + E ++ GI P+GVL++GPPG GKT+LAKA+A F
Sbjct: 323 YIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAAN 381
Query: 421 GSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
G++FV+ ++G V+D+F ++ +P+I
Sbjct: 382 GTDFVEMFVGVAASRVKDLFASSRSYAPSI 411
>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
protease GI:13183728 from [Medicago sativa]
Length = 704
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/81 (44%), Positives = 51/81 (62%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + + P +FIDEIDA+ +R G + E ++ + +LL +MDGF + V V+ A
Sbjct: 335 FEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAA 394
Query: 657 TNRADTLDPALLRPGRLDRKI 719
TNR D LD ALLRPGR DR++
Sbjct: 395 TNRPDVLDSALLRPGRFDRQV 415
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/88 (40%), Positives = 52/88 (59%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++E V+ L + + Y +G + P+G L+ GPPG GKT+LA+AVA F S
Sbjct: 259 KLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAAS 317
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EFV+ ++G G VRD+F AK +P I
Sbjct: 318 EFVELFVGVGASRVRDLFEKAKSKAPCI 345
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/81 (44%), Positives = 51/81 (62%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + + P +FIDEIDA+ +R G + E ++ + +LL +MDGF + V V+ A
Sbjct: 347 FEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAA 406
Query: 657 TNRADTLDPALLRPGRLDRKI 719
TNR D LD ALLRPGR DR++
Sbjct: 407 TNRPDVLDSALLRPGRFDRQV 427
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/88 (40%), Positives = 52/88 (59%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++E V+ L + + Y +G + P+G L+ GPPG GKT+LA+AVA F S
Sbjct: 271 KLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAAS 329
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EFV+ ++G G VRD+F AK +P I
Sbjct: 330 EFVELFVGVGASRVRDLFEKAKSKAPCI 357
>At1g07510.1 68414.m00804 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 813
Score = 75.8 bits (178), Expect = 3e-14
Identities = 35/88 (39%), Positives = 57/88 (64%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K I E V L + + Y +G + P+G L+ GPPG GKT+LAKA A + F+ + GS
Sbjct: 336 KQEIMEFVHF-LQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGS 394
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
+F++ ++G GP VR++F+ A++ +P+I
Sbjct: 395 DFMEMFVGVGPSRVRNLFQEARQCAPSI 422
Score = 71.7 bits (168), Expect = 5e-13
Identities = 41/82 (50%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQ-TGADREVQRILLELLNQMDGFDQTTNVKVIM 653
F ++ PS IFIDEIDAI R +G + E + L +LL +MDGF T V V+
Sbjct: 412 FQEARQCAPSIIFIDEIDAIGRARGRGGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLA 471
Query: 654 ATNRADTLDPALLRPGRLDRKI 719
TNR D LD ALLRPGR DR+I
Sbjct: 472 GTNRPDILDKALLRPGRFDRQI 493
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 74.9 bits (176), Expect = 5e-14
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGI-EPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 423
K + E V LPL EL+ + P +GVL+YGPPG GKTMLAKA+A + A FI V
Sbjct: 93 KQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRV 152
Query: 424 SEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
S + K+ G+ ++V VF LA + PAI
Sbjct: 153 SNLMSKWFGDAQKLVSAVFSLAYKLQPAI 181
Score = 37.9 bits (84), Expect = 0.007
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGF--DQTTNVKVIMATNRAD 671
QP+ IFIDE+++ +R A + + E + DGF D V V+ ATNR
Sbjct: 178 QPAIIFIDEVESFLGQRRSTDHEA---MANMKTEFMALWDGFSTDPHARVMVLAATNRPS 234
Query: 672 TLDPALLR 695
LD A+LR
Sbjct: 235 ELDEAILR 242
>At2g26140.1 68415.m03137 FtsH protease, putative contains
similarity to YME1 GI:295582, a member of the
ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
genes from [Saccharomyces cerevisiae]
Length = 717
Score = 74.1 bits (174), Expect = 9e-14
Identities = 38/88 (43%), Positives = 53/88 (60%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + E V L + + ++G + P+GVL+ GPPG GKTMLA+A+A F GS
Sbjct: 236 KAELEEIVHY-LRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGS 294
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EF + ++G G R VRD+F AK+ SP I
Sbjct: 295 EFEEMFVGVGARRVRDLFSAAKKCSPCI 322
Score = 62.5 bits (145), Expect = 3e-10
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILL-ELLNQMDGFDQTTNVKVIM 653
F + ++ P IFIDEIDAI R D++ ++ L ++L ++DGF Q + V+
Sbjct: 312 FSAAKKCSPCIIFIDEIDAIGGSR----NPKDQQYMKMTLNQMLVELDGFKQNEGIIVVA 367
Query: 654 ATNRADTLDPALLRPGRLDRKIEFP 728
ATN ++LD AL+RPGR DR I P
Sbjct: 368 ATNFPESLDKALVRPGRFDRHIVVP 392
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 72.9 bits (171), Expect = 2e-13
Identities = 40/87 (45%), Positives = 52/87 (59%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + EAV LPL E ++ I P +GVLM+GPPG GKT+LAKAVA F V +
Sbjct: 248 KRLLEEAVVLPLWMPEYFQGIR-RPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSA 306
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPA 507
K+ GE RMVR +F LA+ +P+
Sbjct: 307 TLASKWRGESERMVRCLFDLARAYAPS 333
Score = 45.6 bits (103), Expect = 3e-05
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQT-TN-------VKVIMA 656
PS IFIDEID++ R +G +R+ ELL Q+DG T TN V V+ A
Sbjct: 332 PSTIFIDEIDSLCNSR--GGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAA 389
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TN +D AL R RL+++I PL
Sbjct: 390 TNFPWDIDEALRR--RLEKRIYIPL 412
>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 393
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/87 (36%), Positives = 55/87 (63%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++EAV +P+ + + + + P +G+L++GPPG GKTMLAKAVA F + S
Sbjct: 121 KKLLKEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISAS 179
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPA 507
V K+ G+ +++R +F LA+ ++P+
Sbjct: 180 SVVSKWRGDSEKLIRVLFDLARHHAPS 206
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTN-VKVIM 653
F + PS IF+DEIDAI ++R +R+ ELL QMDG +T V V+
Sbjct: 197 FDLARHHAPSTIFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLA 256
Query: 654 ATNRADTLDPALLRPGRLDRKIEFPL 731
ATN LD A+LR RL+++I PL
Sbjct: 257 ATNLPWELDAAMLR--RLEKRILVPL 280
>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 384
Score = 72.1 bits (169), Expect = 3e-13
Identities = 32/87 (36%), Positives = 55/87 (63%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++EAV +P+ + + + + P +G+L++GPPG GKTMLAKAVA F + S
Sbjct: 112 KKLLKEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLAKAVATECNTTFFNISAS 170
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPA 507
V K+ G+ +++R +F LA+ ++P+
Sbjct: 171 SVVSKWRGDSEKLIRVLFDLARHHAPS 197
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTN-VKVIM 653
F + PS IF+DEIDAI ++R +R+ ELL QMDG +T V V+
Sbjct: 188 FDLARHHAPSTIFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLA 247
Query: 654 ATNRADTLDPALLRPGRLDRKIEFPL 731
ATN LD A+LR RL+++I PL
Sbjct: 248 ATNLPWELDAAMLR--RLEKRILVPL 271
>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
domain
Length = 487
Score = 71.7 bits (168), Expect = 5e-13
Identities = 35/88 (39%), Positives = 53/88 (60%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + E V LP +L+ + P RG+L++GPPG GKTMLAKAVA + A F V S
Sbjct: 225 KQALLEMVILPAKRRDLFTGLR-RPARGLLLFGPPGNGKTMLAKAVASESQATFFNVSAS 283
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
K++GE ++V+ +F++A P++
Sbjct: 284 SLTSKWVGEAEKLVKTLFQVAISRQPSV 311
Score = 48.0 bits (109), Expect = 6e-06
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTN--VKVIMATNRAD 671
QPS IF+DEID+I + R ++ A R R+ E L Q DG + V +I ATN+
Sbjct: 308 QPSVIFMDEIDSIMSTRSTSENEASR---RLKSEFLIQFDGVTSNPDDLVIIIGATNKPQ 364
Query: 672 TLDPALLRPGRLDRKIEFPL 731
LD A+LR RL ++I PL
Sbjct: 365 ELDDAVLR--RLVKRIYVPL 382
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 71.3 bits (167), Expect = 6e-13
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Frame = +1
Query: 241 YTKTRIREAVELPLTHVELYRQIGI-EPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRV 417
+ K + E V LP+ EL+ + + P +G+L++GPPG GKT+LAKA+A A FI +
Sbjct: 157 HVKKTLNELVILPMRRPELFTRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISI 216
Query: 418 VGSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
GS K+ G+ ++ + +F A + +P I
Sbjct: 217 TGSTLTSKWFGDAEKLTKALFSFASKLAPVI 247
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 71.3 bits (167), Expect = 6e-13
Identities = 35/88 (39%), Positives = 55/88 (62%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K ++EAV LP+ + + P R L+YGPPG GK+ LAKAVA + F V S
Sbjct: 141 KQALQEAVILPVKFPQFFTGKR-RPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSS 199
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
+ V K++GE ++V ++F +A+E++P+I
Sbjct: 200 DLVSKWMGESEKLVSNLFEMARESAPSI 227
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQT-TNVKVIM 653
F + PS IF+DEID++ R + +RI ELL QM G V V+
Sbjct: 217 FEMARESAPSIIFVDEIDSLCGTR--GEGNESEASRRIKTELLVQMQGVGHNDEKVLVLA 274
Query: 654 ATNRADTLDPALLRPGRLDRKIEFPL 731
ATN LD A+ R R D++I PL
Sbjct: 275 ATNTPYALDQAIRR--RFDKRIYIPL 298
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/22 (40%), Positives = 19/22 (86%)
Frame = +2
Query: 200 EKPDVQYSDIGGMDTQKQELEK 265
EKP++++SD+ G+++ KQ L++
Sbjct: 125 EKPNIKWSDVAGLESAKQALQE 146
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 70.9 bits (166), Expect = 8e-13
Identities = 34/88 (38%), Positives = 49/88 (55%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K I+E +ELP +++ + + VL+YGPPGCGKT + A A + FI V G
Sbjct: 853 KNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGP 912
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
E + KY+G + VRD+F A +P I
Sbjct: 913 ELLNKYIGASEQAVRDIFSKAAAAAPCI 940
Score = 68.1 bits (159), Expect = 6e-12
Identities = 37/78 (47%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLD 680
P +F DE D+IA KR TG R++ + L ++DG + T V V AT+R D LD
Sbjct: 938 PCILFFDEFDSIAPKRGHDNTGV---TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLD 994
Query: 681 PALLRPGRLDRKI--EFP 728
PALLRPGRLDR + +FP
Sbjct: 995 PALLRPGRLDRLLLCDFP 1012
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 298 YRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
+ + I P +L+YGPPG GKT+LA+A A +
Sbjct: 585 FSKFKIPSPGHILIYGPPGSGKTILARAAAKY 616
>At5g53170.1 68418.m06610 FtsH protease, putative similar to
ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
musculus]
Length = 806
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/88 (39%), Positives = 53/88 (60%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
K + E VE L + + ++G + P+G+L+ G PG GKT+LAKA+A F GS
Sbjct: 371 KQELEEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGS 429
Query: 427 EFVQKYLGEGPRMVRDVFRLAKENSPAI 510
EF + ++G G R VR +F+ AK+ +P I
Sbjct: 430 EFEEMFVGVGARRVRSLFQAAKKKAPCI 457
Score = 69.3 bits (162), Expect = 2e-12
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F + +++ P IFIDEIDA+ + R + + + ++L+E MDGF+Q + V+ A
Sbjct: 447 FQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVE----MDGFEQNEGIIVMAA 502
Query: 657 TNRADTLDPALLRPGRLDRKIEFP 728
TN D LDPAL RPGR DR I P
Sbjct: 503 TNLPDILDPALTRPGRFDRHIVVP 526
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 70.5 bits (165), Expect = 1e-12
Identities = 42/85 (49%), Positives = 48/85 (56%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F ++ QPS IF DEID +A KR Q V LL LL DG +V VI A
Sbjct: 810 FQVAEKCQPSIIFFDEIDGLAPKRSRQQDQTHSSVVSTLLALL---DGLKSRGSVVVIGA 866
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TN D +DPAL RPGR DR+I FPL
Sbjct: 867 TNYPDAIDPALRRPGRFDREIYFPL 891
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/90 (32%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAV-----AHHTTAAFIRVV 420
++E V +PL + E + +G+ PPRG+L++G PG GKT++ +A+ + A+
Sbjct: 731 MKEVVLIPLLYPEFFDNLGLTPPRGILLHGHPGTGKTLVVRALIGSLARGNRRIAYFARK 790
Query: 421 GSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
G++ + KY+G+ R +R +F++A++ P+I
Sbjct: 791 GADCLGKYVGDAERQLRLLFQVAEKCQPSI 820
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGI-EPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 423
K + E V LP+ EL+ + + P +G+L++GPPG GKT+LAKA+A A FI + G
Sbjct: 360 KKALNELVILPMRRPELFARGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITG 419
Query: 424 SEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
S K+ G+ ++ + +F A + +P I
Sbjct: 420 STLTSKWFGDAEKLTKALFSFATKLAPVI 448
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 70.1 bits (164), Expect = 1e-12
Identities = 40/85 (47%), Positives = 45/85 (52%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
F QR QPS IF DEID +A R Q + LL L MDG D V +I A
Sbjct: 472 FEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLAL---MDGLDSRGQVVLIGA 528
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR D +D AL RPGR DR+ F L
Sbjct: 529 TNRVDAIDGALRRPGRFDREFNFSL 553
Score = 67.7 bits (158), Expect = 7e-12
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAA-----FIRVV 420
++E V PL + E + I PPRGVL+ GPPG GKT++A+A+A + A F
Sbjct: 393 LKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRK 452
Query: 421 GSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
G++ + K++GE R ++ +F A+ N P+I
Sbjct: 453 GADVLSKWVGEAERQLKLLFEEAQRNQPSI 482
>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 287
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/90 (35%), Positives = 52/90 (57%)
Frame = +1
Query: 241 YTKTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVV 420
+ K + E V PL ++++ P +G+L++GPPG GKTM+ KA+A A F +
Sbjct: 17 HAKKCVTEMVIWPLLRPDIFKGCR-SPGKGLLLFGPPGTGKTMIGKAIAGEAKATFFYIS 75
Query: 421 GSEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
S K++GEG ++VR +F +A PA+
Sbjct: 76 ASSLTSKWIGEGEKLVRALFGVASCRQPAV 105
Score = 48.4 bits (110), Expect = 5e-06
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 498 QPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ-TTNVKVIMATNRADT 674
QP+ IF+DEID++ ++R G +R+ + L +M+GFD + + +I ATNR
Sbjct: 102 QPAVIFVDEIDSLLSQR--KSDGEHESSRRLKTQFLIEMEGFDSGSEQILLIGATNRPQE 159
Query: 675 LDPALLRPGRLDRKIEFPL 731
LD A R RL +++ PL
Sbjct: 160 LDEAARR--RLTKRLYIPL 176
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/74 (44%), Positives = 43/74 (58%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 689
I DEIDAI R + G I+ +LL ++DG + NV +I TNR D LD AL
Sbjct: 322 IIFDEIDAICKSRGSTRDGTGVH-DSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEAL 380
Query: 690 LRPGRLDRKIEFPL 731
LRPGRL+ ++E L
Sbjct: 381 LRPGRLEVQVEISL 394
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/66 (34%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +1
Query: 304 QIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVV-GSEFVQKYLGEGPRMVRDVF 480
++GI+ +G+L++GPPG GKT++A+ + ++V G E + K++GE + VRD+F
Sbjct: 244 RLGIKHVKGMLLFGPPGTGKTLMARQIGKMLNGKDPKIVNGPEVLSKFVGETEKNVRDLF 303
Query: 481 RLAKEN 498
A+++
Sbjct: 304 ADAEQD 309
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 334 LMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSE 429
L+ GP G GKT LA + + ++++V +E
Sbjct: 534 LLEGPSGSGKTALAATIGIDSDFPYVKIVSAE 565
>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 609
Score = 59.3 bits (137), Expect = 3e-09
Identities = 40/85 (47%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +3
Query: 483 SRQREQPSN--IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMA 656
S+ E P IF+DEIDA A R A R R+L LL Q+DGF+Q V VI A
Sbjct: 414 SQANELPDGAIIFLDEIDAFAISRDSEMHEATR---RVLSVLLRQIDGFEQEKKVVVIAA 470
Query: 657 TNRADTLDPALLRPGRLDRKIEFPL 731
TNR LDPAL+ R D I F L
Sbjct: 471 TNRKQDLDPALI--SRFDSMIMFDL 493
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +1
Query: 322 PRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKE 495
PR VL GPPG GKT A+ +A+ + V + KY GE R++ VF A E
Sbjct: 361 PRAVLFEGPPGTGKTSCARVIANQAGIPLLYVPLEAVMSKYYGESERLLGAVFSQANE 418
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 1025
Score = 58.4 bits (135), Expect = 5e-09
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPP-RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVG 423
K ++E V LP EL+ + + P G+L++GP G GKTMLAKAVA A I +
Sbjct: 744 KDTLKELVMLPFQWPELFCKGQLTKPCNGILLFGPSGTGKTMLAKAVATEAGANLINM-- 801
Query: 424 SEFVQKYLGEGPRMVRDVFRLAKENSPAI 510
+ ++ EG + V+ VF LA + SP+I
Sbjct: 802 --SMSRWFSEGEKYVKAVFSLASKISPSI 828
>At1g79560.1 68414.m09275 FtsH protease, putative contains
similarity to chloroplast FtsH protease GI:5804782 from
[Nicotiana tabacum]
Length = 1008
Score = 50.8 bits (116), Expect = 9e-07
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +1
Query: 325 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSP 504
RGVL+ GPPG GKT+ A+ +A + F+ G+EF G + ++F +A+ N+P
Sbjct: 527 RGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSE-KSGAAKINEMFSIARRNAP 585
Query: 505 A 507
A
Sbjct: 586 A 586
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +3
Query: 477 FPSRQREQPSNIFIDEIDAIATK--RFDAQTGADREVQRILLELLNQMDGFDQTT---NV 641
F +R P+ +F+DEIDAIA + R D + A E L+ + G D+ + V
Sbjct: 577 FSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAV 636
Query: 642 KVIMATNRADTLDPALLRPGRLDRKI 719
I ATNR D LD +R GR+DR++
Sbjct: 637 IFICATNRPDELDLEFVRSGRIDRRL 662
>At3g04340.1 68416.m00459 FtsH protease family protein similar to
chloroplast FtsH protease [Arabidopsis thaliana]
GI:1483215; contains Pfam profiles PF01434: Peptidase
family M41, PF00004: ATPase AAA family
Length = 960
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGS 426
+ I E V L + + ++++G PRGVL+ G G GKT LA A+A + V
Sbjct: 433 REEINEVVAF-LQNPKAFQEMGARAPRGVLIVGERGTGKTSLALAIAAEARVPVVNVEAQ 491
Query: 427 EF-VQKYLGEGPRMVRDVFRLAKENSPAI 510
E ++G+ VR++F+ A++ +P I
Sbjct: 492 ELEAGLWVGQSAANVRELFQTARDLAPVI 520
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = +3
Query: 501 PSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLD 680
P IF+++ D A R ++ + + +LL ++DGF++ V ++ T +D
Sbjct: 518 PVIIFVEDFDLFAGVRGKFVHTKQQDHESFINQLLVELDGFEKQDGVVLMATTRNHKQID 577
Query: 681 PALLRPGRLDR 713
AL RPGR+DR
Sbjct: 578 EALRRPGRMDR 588
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
KT + E ++ + + Y+++G RG L+YGPPG GK+ L A+A+H
Sbjct: 274 KTSVMEDLDKFVKRRDFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANH 322
Score = 34.7 bits (76), Expect = 0.064
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 570 DREVQRILLE-LLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLDRKI 719
D +++ L LLN +DG + + +I TN + LD ALLRPGR+D I
Sbjct: 382 DPRYKKVTLSGLLNFIDGLWSSCGDERIIIFTTNYKEKLDAALLRPGRMDMHI 434
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +3
Query: 519 DEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVK--VIMATNRADTLDPALL 692
D+ + I K G ++E + L LLN +DG + ++ TN D LDPAL+
Sbjct: 321 DDKNTIEKKMMMKNEGENKESKVTLSGLLNFIDGLWSACGGERIIVFTTNFVDKLDPALI 380
Query: 693 RPGRLDRKIE 722
R GR+D+ IE
Sbjct: 381 RKGRMDKHIE 390
Score = 35.1 bits (77), Expect = 0.048
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAH 390
+ Y++IG RG L++GPPG GK+ + A+A+
Sbjct: 230 DYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMAN 262
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
K +I + +E L E Y+++G RG L+YGPPG GK+ L A+A++
Sbjct: 218 KKKIIDDLERFLKRKEFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 266
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Frame = +3
Query: 504 SNIFIDEIDAIATKRF-DAQTGADREVQ-RILLE-LLNQMDGFDQTTNVK--VIMATNRA 668
S + I++ID A R +A+ D +++ ++ L +LN +DG + + ++ TN
Sbjct: 296 SILVIEDIDCNAEVRDREAENQEDEQIKGKVTLSGILNFIDGLWSSFGDERIIVFTTNHK 355
Query: 669 DTLDPALLRPGRLD 710
+ LDPALLRPGR+D
Sbjct: 356 ERLDPALLRPGRMD 369
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
K +I + +E L E Y+++G RG L+YGPPG GK+ L A+A++
Sbjct: 219 KKKIIDDMERFLKRREFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMANY 267
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Frame = +3
Query: 504 SNIFIDEIDAIATKRFDAQTGADREVQ-----RILLE-LLNQMDGFDQTTNVK--VIMAT 659
S + I++ID + + D + +E + R+ L LLN +DG + + ++ T
Sbjct: 297 SILVIEDIDCSSAEVVDREADEYQEYEEGYYGRVTLSGLLNFVDGLWSSFGDERIIVFTT 356
Query: 660 NRADTLDPALLRPGRLDRKI 719
N + LDPALLRPGR+D I
Sbjct: 357 NHKERLDPALLRPGRMDMHI 376
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 689
+FIDE DA +R E QR L L G DQ+ ++ +++ATNR LD A+
Sbjct: 433 LFIDEADAFLCERNSTYMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRRGDLDSAV 488
Query: 690 LRPGRLDRKIEFPL 731
R+D IEFPL
Sbjct: 489 --TDRIDEVIEFPL 500
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +1
Query: 319 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN 498
P R ++ YGPPG GKTM+A+ +A + + + G + V + + +F AK++
Sbjct: 369 PFRNMMFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGSQAVTKIHQIFDWAKKS 427
Query: 499 SPAI 510
+ +
Sbjct: 428 NKGL 431
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +3
Query: 486 RQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDG-FDQTTNVKVIM-AT 659
+++E+ + +E A K + G +RE + L LLN +DG + + K+I+ T
Sbjct: 311 KKKEEDEDEEEEEKKKEAEKLLKRERG-ERESKVTLSGLLNAIDGLWSACSGEKIIVFTT 369
Query: 660 NRADTLDPALLRPGRLDRKIE 722
N D LDPAL+R GR+D IE
Sbjct: 370 NYLDKLDPALIRRGRMDNHIE 390
Score = 36.3 bits (80), Expect = 0.021
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAH 390
+ YR++G RG L++GPPG GK+ + A+A+
Sbjct: 229 DYYRKVGKPWKRGYLLFGPPGTGKSTMISAMAN 261
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 689
+FIDE DA +R E QR L L G DQ+ ++ +++ATNR LD A+
Sbjct: 448 LFIDEADAFLCERNSTYMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPGDLDSAV 503
Query: 690 LRPGRLDRKIEFPL 731
R+D IEFPL
Sbjct: 504 --TDRIDEVIEFPL 515
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 319 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN 498
P R ++ YGPPG GKTM+A+ +A + + + G + V + + ++F AK++
Sbjct: 384 PFRNMMFYGPPGTGKTMVAREIARKSGLDYAMMTGGD-VAPLGAQAVTKIHEIFDWAKKS 442
Query: 499 SPAI 510
+ +
Sbjct: 443 NKGL 446
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +3
Query: 534 IATKRFDAQTGADREVQRILLE-LLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGR 704
+ T R D + G + + + L LLN +DG + +I TN + LDPAL+R GR
Sbjct: 312 LMTSREDGEQGTEEDKSFVTLSGLLNFIDGIWSACGQERIIIFTTNHFEKLDPALIRRGR 371
Query: 705 LDRKIE 722
+D IE
Sbjct: 372 MDMHIE 377
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
E Y++IG RG L++GPPG GK+ + A+A+H
Sbjct: 226 EYYKKIGKAWKRGYLLHGPPGTGKSTMIAAMANH 259
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
+ Y+++G RG L+YGPPG GKT L A+A++
Sbjct: 235 DFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIANY 268
Score = 34.3 bits (75), Expect = 0.085
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +3
Query: 645 VIMATNRADTLDPALLRPGRLDRKI 719
VI T + LDPALLRPGR+D I
Sbjct: 351 VIFTTTHKERLDPALLRPGRMDMHI 375
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 41.1 bits (92), Expect = 7e-04
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 519 DEIDAIATKRFDAQTGADREVQRILLE-LLNQMDG-FDQTTNVKVIM-ATNRADTLDPAL 689
+E D K + + D + ++ L LLN +DG + + K+I+ TN D LDPAL
Sbjct: 321 EEEDGEEKKEGEKKPKVDDKQSKVTLSGLLNSIDGLWSACSGEKIIVFTTNFVDKLDPAL 380
Query: 690 LRPGRLDRKIE 722
+R GR+D IE
Sbjct: 381 IRRGRMDNHIE 391
Score = 35.5 bits (78), Expect = 0.037
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAH 390
+ Y+++G RG L++GPPG GK+ + A+A+
Sbjct: 233 DYYKKVGKPWKRGYLLFGPPGTGKSTMIAAIAN 265
>At5g17760.2 68418.m02083 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 341
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
K + E ++ + E Y+++G RG L+YGPPG GK+ L A+A++
Sbjct: 228 KRDVIEDLDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANY 276
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/49 (36%), Positives = 30/49 (61%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
K + E ++ + E Y+++G RG L+YGPPG GK+ L A+A++
Sbjct: 228 KRDVIEDLDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANY 276
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +3
Query: 600 LLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLDRKI 719
LLN +DG + + +I TN D LDPALLRPGR+D I
Sbjct: 344 LLNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHI 385
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/83 (34%), Positives = 43/83 (51%)
Frame = +3
Query: 483 SRQREQPSNIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATN 662
S++ ++ +FIDE DA +R E QR L L G DQ+ ++ + +ATN
Sbjct: 452 SKKSKRGLLLFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATN 507
Query: 663 RADTLDPALLRPGRLDRKIEFPL 731
R LD A+ R+D +EFPL
Sbjct: 508 RPGDLDSAV--ADRIDETLEFPL 528
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 319 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSE 429
P R +L YGPPG GKTM A+ +A + + + G +
Sbjct: 397 PFRNILFYGPPGTGKTMAARELARRSGLDYALMTGGD 433
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +3
Query: 489 QREQPSNIFIDEIDAIAT-KRFDAQTGADREVQRILLELLNQMDGFDQTTNVK--VIMAT 659
QR+Q + DE + K+ G ++ + L LLN +DG + ++ T
Sbjct: 312 QRKQKKDEEEDEDETSPIEKQMKKDQGENKGSKVTLSGLLNFIDGLWSACGGERIIVFTT 371
Query: 660 NRADTLDPALLRPGRLDRKIE 722
N D LDPAL+R GR+D+ IE
Sbjct: 372 NFIDKLDPALIRKGRMDKHIE 392
Score = 35.1 bits (77), Expect = 0.048
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAH 390
+ Y++IG RG L++GPPG GK+ + A+A+
Sbjct: 233 DYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMAN 265
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 600 LLNQMDG-FDQTTNVKVIM-ATNRADTLDPALLRPGRLDRKI 719
LLN +DG + N ++I+ TN + LDPALLRPGR+D I
Sbjct: 339 LLNCIDGLWSSCGNERIIIFTTNNKEKLDPALLRPGRMDMHI 380
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
+ Y+++G RG L+YGPPG GK+ L A+A++
Sbjct: 235 DFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMANY 268
>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 298 YRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
Y ++G RG L+YGPPG GK+ L A+A+H
Sbjct: 239 YGRVGKAWKRGYLLYGPPGTGKSSLIAAIANH 270
Score = 38.3 bits (85), Expect = 0.005
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Frame = +3
Query: 600 LLNQMDG-FDQTTNVKVIM-ATNRADTLDPALLRPGRLDRKI 719
LLN +DG + N ++I+ TN + LDPALLRPGR+D I
Sbjct: 335 LLNFVDGLWSSCGNERIIVFTTNYREKLDPALLRPGRMDMHI 376
>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
+ ++ +G RG L+YGPPG GK+ + A+A+H
Sbjct: 229 DFFKSVGRAWKRGYLLYGPPGTGKSSMVAAIANH 262
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 576 EVQRILLELLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLD 710
EV L LLN +DG + + +I TN + LDPALLRPGR+D
Sbjct: 333 EVGISLSGLLNFVDGLWSSCGEEKIIIFTTNHKEKLDPALLRPGRMD 379
>At3g28520.1 68416.m03562 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 478
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +3
Query: 558 QTGADREVQRILLELLNQMDG-FDQTTNVKVIM-ATNRADTLDPALLRPGRLDRKIE 722
+ + E L LLN +DG + ++ K+I+ TN D LDPAL+R GR+D IE
Sbjct: 319 RVSGNNESNVTLSGLLNAIDGLWSACSDEKIIIFTTNFVDNLDPALIRRGRMDYHIE 375
Score = 34.7 bits (76), Expect = 0.064
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAH 390
+ YR++ RG L++GPPG GK+ + A+A+
Sbjct: 218 DYYRKVAKPWKRGYLLFGPPGTGKSTMISAIAN 250
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/74 (37%), Positives = 38/74 (51%)
Frame = +3
Query: 510 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPAL 689
+FIDE DA +R E QR L L G DQ+ ++ + +ATNR LD A+
Sbjct: 460 LFIDEADAFLCERNKTYMS---EAQRSALNALLFRTG-DQSKDIVLALATNRPGDLDSAV 515
Query: 690 LRPGRLDRKIEFPL 731
R+D +EFPL
Sbjct: 516 --ADRVDEVLEFPL 527
Score = 35.5 bits (78), Expect = 0.037
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 319 PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSE 429
P R +L++GPPG GKTM A+ +A + + + G +
Sbjct: 396 PFRNILLHGPPGTGKTMAARELARKSGLDYALMTGGD 432
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAH 390
E Y++IG RG L+YGPPG GK+ + A+A+
Sbjct: 231 EYYKKIGKAWKRGYLLYGPPGTGKSTMISAMAN 263
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +3
Query: 570 DREVQRILLE-LLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLDRKIE 722
D++ + L LLN +DG + V+ TN + LDPAL+R GR+D IE
Sbjct: 326 DKDENSVTLSGLLNFIDGIWSACGQERIVVFTTNHLEKLDPALIRRGRMDMHIE 379
>At5g17750.1 68418.m02081 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 392
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
K+ + E ++ + + Y+++G R +YGPPG GK+ L A+A++
Sbjct: 195 KSSVMEDLDRFIKRKDYYKRVGKAWKRSYFLYGPPGTGKSSLVAAMANY 243
Score = 35.9 bits (79), Expect = 0.028
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +3
Query: 600 LLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLDRKI 719
LLN +DG + + VI TN + LDPALLRPG +D I
Sbjct: 311 LLNCIDGLWSSCGDERIVIFTTNNKEVLDPALLRPGCMDMHI 352
>At4g05380.1 68417.m00820 AAA-type ATPase family protein contains
similarity to mitochondrial ATPase (AAA family) Bcs1p,
Saccharomyces cerevisiae, Swiss Prot:P32839
Length = 248
Score = 36.7 bits (81), Expect = 0.016
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 600 LLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLD 710
LLN +DG + + +I TN + LDPALLRPGR+D
Sbjct: 129 LLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMD 167
Score = 36.3 bits (80), Expect = 0.021
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAH 390
+ ++ +G RG L+YGPPG GK+ L A+A+
Sbjct: 21 DFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIAN 53
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAH 390
+ Y++IG RG L+YGPPG GK+ + A+A+
Sbjct: 226 DYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMAN 258
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 600 LLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLDRKIE 722
LLN +DG + ++ TN LDPAL+R GR+D IE
Sbjct: 336 LLNFIDGIWSACGQERIIVFTTNHLAKLDPALIRRGRMDMHIE 378
>At4g30250.1 68417.m04301 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 512
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
K RI E + Y++ G RG L+YGPPG GK+ L A+A++
Sbjct: 213 KKRIMEDLREFANGQGFYQKTGRAWKRGYLLYGPPGTGKSSLIAAMANY 261
>At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam
profile: ATPase family PF00004
Length = 440
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
K R+ + ++L ++ + Y+++G R L++G PG GKT L A+A +
Sbjct: 174 KRRLIDDIDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVAAIAKY 222
>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 36.3 bits (80), Expect = 0.021
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 292 ELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAH 390
E Y +IG RG L+YGPPG GK+ + A+A+
Sbjct: 226 EYYDRIGKAWKRGYLLYGPPGTGKSTMIAAMAN 258
>At2g37280.1 68415.m04573 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1413
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVA 387
I P R L+ GPPGCGKT L KA++
Sbjct: 162 ISPGRLTLLLGPPGCGKTTLLKALS 186
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 34.7 bits (76), Expect = 0.064
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 298 YRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
Y++ G RG L+YGPPG GK+ + A+A++
Sbjct: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 600 LLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLDRKI 719
LLN DG + + TN + LDPALLR GR+D I
Sbjct: 350 LLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHI 391
>At5g15450.1 68418.m01808 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 968
Score = 34.7 bits (76), Expect = 0.064
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 319 PPRGVLMYGPPGCGKTMLAKAVAHH---TTAAFIRVVGSEFVQKY 444
P + GP G GKT LAKA+A + T A +R+ SE+++K+
Sbjct: 677 PIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSEYMEKH 721
>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 506
Score = 34.3 bits (75), Expect = 0.085
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 298 YRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH 393
Y + G RG L+YGPPG GK+ + A+A++
Sbjct: 229 YERTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 600 LLNQMDGFDQTTNVK--VIMATNRADTLDPALLRPGRLDRKI 719
LLN DG + + TN + LDPALLR GR+D I
Sbjct: 341 LLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHI 382
>At4g24710.1 68417.m03536 AAA-type ATPase family protein similar to
HPV16 E1 protein binding protein [Homo sapiens]
gi|2232019|gb|AAB64095; contains Pfam domain, PF00004:
ATPase, AAA family ('A'TPases 'A'ssociated with diverse
cellular 'A'ctivities)
Length = 467
Score = 34.3 bits (75), Expect = 0.085
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
Frame = +1
Query: 223 GYWRHGYTKTRIREAVELPLTHVELYRQIGIEPP-----RGVLMYGPPGCGKTMLAKAVA 387
G W ++ +++ + L+ Q G+ P R +L++GPPG GKT L KA+A
Sbjct: 164 GLWESLIYESGLKQRLLRYAASALLFTQKGVNPNLVSWNRIILLHGPPGTGKTSLCKALA 223
Query: 388 ---------HHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKE 495
+ I V K+ E ++V +F+ +E
Sbjct: 224 QKLSIRCNSRYPHCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQE 268
>At4g15230.1 68417.m02333 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1326
Score = 34.3 bits (75), Expect = 0.085
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVA 387
+ P R L+ GPPGCGKT L +A++
Sbjct: 164 VRPGRMTLLLGPPGCGKTTLLQALS 188
>At4g15215.1 68417.m02332 ABC transporter family protein similar to
PDR5-like ABC transporter [Spirodela polyrhiza]
GI:1514643; contains Pfam profile PF00005: ABC
transporter
Length = 1390
Score = 34.3 bits (75), Expect = 0.085
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVA 387
+ P R L+ GPPGCGKT L +A++
Sbjct: 161 VRPGRMTLLLGPPGCGKTTLLQALS 185
>At2g25140.1 68415.m03007 heat shock protein 100, putative / HSP100,
putative / heat shock protein clpB, putative /
HSP100/ClpB, putative similar to HSP100/ClpB GI:9651530
[Phaseolus lunatus]
Length = 964
Score = 34.3 bits (75), Expect = 0.085
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 319 PPRGVLMYGPPGCGKTMLAKAVA---HHTTAAFIRVVGSEFVQKY 444
P + GP G GKT LAKA+A +T A +RV SE+++K+
Sbjct: 682 PIASFMFMGPTGVGKTELAKALAGYLFNTENAIVRVDMSEYMEKH 726
>At5g53350.1 68418.m06630 ATP-dependent Clp protease ATP-binding
subunit ClpX1 (CLPX) identical to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 579
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGE 453
+L+ GP G GKT+LAK +A F+ + Q Y+GE
Sbjct: 226 ILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGE 267
>At4g15236.1 68417.m02335 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1388
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVA 387
I P R L+ GPPGCGKT L A++
Sbjct: 159 IRPKRMTLLLGPPGCGKTTLLLALS 183
>At3g53480.1 68416.m05904 ABC transporter family protein PDR5-like
ABC transporter, Spirodela polyrrhiza, EMBL:Z70524
Length = 1450
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVA 387
I+P R L+ GPP CGKT L KA++
Sbjct: 197 IKPGRLTLLLGPPSCGKTTLLKALS 221
>At2g46620.1 68415.m05815 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 491
Score = 33.5 bits (73), Expect = 0.15
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 669 DTLDPALLRPGRLDRKIEFPL 731
+ +DPA+LRPGR+D I FPL
Sbjct: 333 EQIDPAMLRPGRVDVHIHFPL 353
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 247 KTRIREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAH 390
K +++ +E L + Y ++G R L+YGP G GK+ A+A+
Sbjct: 206 KNKVKSDLESFLKGKQYYNRLGRVWKRSYLLYGPSGTGKSSFVAAMAN 253
>At1g21690.2 68414.m02715 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 327
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVAH 390
+L YGPPG GKT A A+AH
Sbjct: 33 MLFYGPPGTGKTTTALAIAH 52
>At1g21690.1 68414.m02714 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 339
Score = 33.1 bits (72), Expect = 0.20
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVAH 390
+L YGPPG GKT A A+AH
Sbjct: 45 MLFYGPPGTGKTTTALAIAH 64
>At4g05340.1 68417.m00816 hypothetical protein
Length = 96
Score = 32.7 bits (71), Expect = 0.26
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 645 VIMATNRADTLDPALLRPGRLD 710
+I TN + LDPA LRPG++D
Sbjct: 49 IIFTTNHKEKLDPAFLRPGKMD 70
>At5g49840.1 68418.m06172 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]; non-consensus splice donor GC at exon 4;
non-consensus splice donor AA at exon 7
Length = 606
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGE 453
VL+ GP G GKT+LAK +A F + Q Y+GE
Sbjct: 265 VLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLTQAGYVGE 306
>At5g36930.1 68418.m04427 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1188
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +1
Query: 280 LTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKY 444
L H+ IG + R +++YG G GKT LAK + + F GS F++ +
Sbjct: 195 LQHISSLLSIGSDGVRVIVIYGMGGIGKTTLAKVAFNEFSHLF---EGSSFLENF 246
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK-YLGE 453
VL+ GP G GKT+LAK +A F+ + Q Y+G+
Sbjct: 311 VLLMGPTGSGKTLLAKTLARLVNVPFVIADATTLTQAGYVGD 352
>At5g22330.1 68418.m02605 TATA box-binding protein-interacting
protein-related similar to TATA box-binding
protein-interacting protein SP:O35753 from [ Mus
musculus]
Length = 458
Score = 31.5 bits (68), Expect = 0.60
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 259 REAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHH--TTAAFIRVVGSE 429
REA L + ++ + G + +L+ GPPG GKT LA ++ + F +VGSE
Sbjct: 49 REAAGLVVDMIKQKKMAG----KALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSE 103
>At4g15233.1 68417.m02334 ABC transporter family protein similar to
pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, PDR5-like ABC transporter
[Spirodela polyrhiza] GI:1514643; contains Pfam profile
PF00005: ABC transporter
Length = 1168
Score = 31.5 bits (68), Expect = 0.60
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVA 387
I P R L+ GPP CGKT L A++
Sbjct: 161 IRPKRMTLLLGPPSCGKTTLLLALS 185
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar
to pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 31.5 bits (68), Expect = 0.60
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVAHHT 396
I+P R L+ GPPG GK+ L KA++ T
Sbjct: 169 IKPGRLTLLLGPPGSGKSTLLKALSGKT 196
>At5g17890.1 68418.m02098 LIM domain-containing protein / disease
resistance protein-related low similarity to disease
resistance protein RPP4 [Arabidopsis thaliana]
GI:20270890; contains Pfam profiles PF00412: LIM domain,
PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1613
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 325 RGVLMYGPPGCGKTMLAKAVAHHTTAAF 408
R + ++G PG GKT LAKAV +H + +
Sbjct: 190 RSIGIWGMPGIGKTTLAKAVFNHMSTDY 217
>At2g36380.1 68415.m04464 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1453
Score = 31.1 bits (67), Expect = 0.79
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 289 VELYRQIG--IEPPRGVLMYGPPGCGKTMLAKAVA 387
+E+ + I I+P R L+ GPP GKT L +A+A
Sbjct: 186 IEILKDISGIIKPSRMTLLLGPPSSGKTTLLQALA 220
>At1g06720.1 68414.m00714 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 1147
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 301 RQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTT 399
R G PP V++ GPPG GK+++ K++ T
Sbjct: 76 RNYGEAPPFVVVVQGPPGVGKSLVIKSLVKEFT 108
>At2g22050.1 68415.m02619 kelch repeat-containing F-box family
protein similar to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 349
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = -1
Query: 680 VQCISTICRHYYFNISSLIKTIH-LVEEFK*NPLNFSVGTGLGVKSFSSNRINFINENIA 504
+ C+ + R YY N+ + KT+ LV + + L + SFS N IN + I
Sbjct: 40 LDCLQRVPRSYYLNLCRVSKTLRSLVRSPELSRLRTLLPKNSVYVSFSQNIINVPPDTIY 99
Query: 503 GLFSLARRKTSRT 465
F+L ++KT +T
Sbjct: 100 RWFTL-KKKTMKT 111
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSE--FVQKYLG 450
VL+ GP GKT L K +A + F+R+ E +Q+YLG
Sbjct: 1075 VLLQGPTSSGKTSLVKYLAAISGNKFVRINNHEQTDIQEYLG 1116
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 277 PLTHVELYRQI-GIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSE 429
P TH + R + ++ + +L+ G PG GKT L A+ ++ +R+ SE
Sbjct: 1729 PTTHRNVLRVLRAMQLSKPILLEGSPGVGKTSLILALGKYSGHKVVRINLSE 1780
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 307 IGIEPPRGVLMYGPPGCGKTMLAKAVA 387
+ + R VL+YGP G GK+ L + +A
Sbjct: 348 LAVSQKRPVLLYGPSGSGKSALIRKLA 374
>At5g50920.1 68418.m06315 ATP-dependent Clp protease ATP-binding
subunit / ClpC almost identical to ClpC GI:2921158 from
[Arabidopsis thaliana]; contains Pfam profile PF02861:
Clp amino terminal domain; contains Pfam profile
PF00004: ATPase, AAA family; contains Pfam profile
PF02151: UvrB/uvrC motif
Length = 929
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 319 PPRGVLMYGPPGCGKTMLAKAVAHH---TTAAFIRVVGSEFVQKY 444
P + GP G GK+ LAKA+A + + A IR+ SEF++++
Sbjct: 637 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 681
>At5g45260.1 68418.m05555 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1187
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 325 RGVLMYGPPGCGKTMLAKAVAHHTTAAF 408
R V ++G PG GKT LAKAV ++AF
Sbjct: 173 RCVGIWGMPGIGKTTLAKAVFDQMSSAF 200
>At5g45050.2 68418.m05524 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1344
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 232 RHGYTKTRIREAVELPLTHVELYRQIGIEPP--RGVLMYGPPGCGKTMLAKAVAHHTTAA 405
R Y K E + + +E+ + I +P R V ++G PG GKT LAKAV +
Sbjct: 131 RDVYEKLFYMERIGIYSKLLEIEKMINKQPLDIRCVGIWGMPGIGKTTLAKAVFDQMSGE 190
Query: 406 F 408
F
Sbjct: 191 F 191
>At5g45050.1 68418.m05523 disease resistance protein-related similar
to NL27 [Solanum tuberosum] GI:3947735; contains Pfam
profiles PF03106: WRKY DNA -binding domain, PF00931:
NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1372
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 232 RHGYTKTRIREAVELPLTHVELYRQIGIEPP--RGVLMYGPPGCGKTMLAKAVAHHTTAA 405
R Y K E + + +E+ + I +P R V ++G PG GKT LAKAV +
Sbjct: 131 RDVYEKLFYMERIGIYSKLLEIEKMINKQPLDIRCVGIWGMPGIGKTTLAKAVFDQMSGE 190
Query: 406 F 408
F
Sbjct: 191 F 191
>At3g48870.1 68416.m05338 ATP-dependent Clp protease ATP-binding
subunit (ClpC) identical to AtClpC GI:5360574 from
[Arabidopsis thaliana]; contains Pfam profiles PF02861:
Clp amino terminal domain and PF02151: UvrB/uvrC motif
Length = 952
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 319 PPRGVLMYGPPGCGKTMLAKAVAHH---TTAAFIRVVGSEFVQKY 444
P + GP G GK+ LAKA+A + + A IR+ SEF++++
Sbjct: 658 PIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERH 702
>At3g16340.1 68416.m02066 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]; contains Pfam profile: PF00005 ABC
transporter
Length = 1416
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +1
Query: 283 THVELYRQIG--IEPPRGVLMYGPPGCGKTMLAKAVA 387
T V + R + I+P R L+ GPP GKT L A+A
Sbjct: 158 TKVTILRDVSGIIKPSRMTLLLGPPSSGKTTLLLALA 194
>At2g25530.1 68415.m03056 AFG1-like ATPase family protein contains
Pfam profile: PF03969 AFG1-like ATPase
Length = 655
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 322 PRGVLMYGPPGCGKTML 372
P+G+ +YG GCGKTML
Sbjct: 241 PKGLYIYGNVGCGKTML 257
>At1g74310.1 68414.m08605 heat shock protein 101 (HSP101) identical
to heat shock protein 101 GI:6715468 GB:AAF26423 from
[Arabidopsis thaliana]
Length = 911
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 316 EPPRGVLMYGPPGCGKTMLAKAVAHH---TTAAFIRVVGSEFVQKY 444
+P L GP G GKT LAKA+A +R+ SE+++++
Sbjct: 597 QPTGSFLFLGPTGVGKTELAKALAEQLFDDENLLVRIDMSEYMEQH 642
>At1g66950.1 68414.m07612 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1454
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVA 387
++P R L+ GPP GKT L +A+A
Sbjct: 198 VKPSRMTLLLGPPSSGKTTLLQALA 222
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIR 414
+ + E L + + R G + + + GPPG GKT + +++A F R
Sbjct: 435 LSDVKERILEFIAVGRLRGTSQGKIICLSGPPGVGKTSIGRSIARALNRKFFR 487
>At4g28070.1 68417.m04026 AFG1-like ATPase family protein contains
Pfam profile: PF03969 AFG1-like ATPase
Length = 464
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAF 408
+ P +G+ +YG G GKTML H A++
Sbjct: 130 VSPVKGLYLYGGVGTGKTMLMDLFFHQLPASW 161
>At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP101,
putative similar to heat shock protein 101 GI:6715468
GB:AAF26423 from [Arabidopsis thaliana]
Length = 623
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 316 EPPRGVLMYGPPGCGKTMLAKAVAHH---TTAAFIRVVGSEFVQKY 444
+P L GP G GKT LAKA+A + +R+ SE+ K+
Sbjct: 562 QPSGSFLFLGPTGVGKTELAKALAEQLFDSENLLVRLDMSEYNDKF 607
>At2g29940.1 68415.m03642 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1426
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVA 387
I+P R L+ GPPG GK+ L A+A
Sbjct: 183 IKPGRMTLLLGPPGSGKSTLLLALA 207
>At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial
(LON) identical to Lon protease homolog 1 mitochondrial
precursor SP:O64948 from [Arabidopsis thaliana]
Length = 888
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 343 GPPGCGKTMLAKAVAHHTTAAFIRV 417
GPPG GKT LA ++A F+R+
Sbjct: 408 GPPGVGKTSLASSIAAALGRKFVRL 432
>At5g47010.1 68418.m05794 RNA helicase, putative similar to type 1
RNA helicase pNORF1 [Homo sapiens] GI:1885356
Length = 1254
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 334 LMYGPPGCGKTMLAKAVAHH 393
L+ GPPG GKT+ + A+ +H
Sbjct: 507 LIQGPPGTGKTVTSAAIVYH 526
>At3g05780.1 68416.m00649 Lon protease, putative similar to Lon
protease homolog 2 SP:P93655
Length = 924
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 256 IREAVELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIR 414
+ + E L + + R G + + + GPPG GKT + +++A F R
Sbjct: 418 LSDVKERILEFIAVGRLRGTSQGKIICLSGPPGVGKTSIGRSIARALDRKFFR 470
>At3g04210.1 68416.m00445 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 531
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 325 RGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEG 456
R + ++GPPG GKT +A+ + + +F V E V+ Y G
Sbjct: 262 RMIGIWGPPGIGKTSIARVLFRKHSDSFDLSVFMETVKGYTRPG 305
>At1g77470.1 68414.m09021 replication factor C 36 kDA, putative
similar to SWISS-PROT:P40937 activator 1 36 kDa subunit
(Replication factor C 36 kDa subunit, A1 36 kDa subunit,
RF-C 36 kDa subunit, RFC36) [Homo sapiens]
Length = 369
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVA 387
+L+YGPPG GKT AVA
Sbjct: 75 LLLYGPPGTGKTSTILAVA 93
>At1g60180.1 68414.m06779 hypothetical protein similar to
hypothetical protein GI:6017113 from [Arabidopsis
thaliana]
Length = 296
Score = 28.7 bits (61), Expect = 4.2
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = +2
Query: 101 KPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQYSDIGGMDTQKQE-----LEK 265
+P VA H H L P A +S L + YS + +D + LEK
Sbjct: 72 RPRQIVAPHIHRLRLKTYQSPCALVDVSSLDEAQVDCFIYSHLKTLDAYLLQDILKMLEK 131
Query: 266 LLNSLSLMWSCTGKLVLSLLGVC 334
L N+ L++ C +LSL VC
Sbjct: 132 LQNAEKLIFGCNILQILSLAEVC 154
>At1g59870.1 68414.m06745 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1469
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVA 387
I+P R L+ GPP GKT L A+A
Sbjct: 194 IKPGRMTLLLGPPSSGKTTLLLALA 218
>At1g15210.1 68414.m01818 ABC transporter family protein Similar to
gb|Z70524 GI:1514643 PDR5-like ABC transporter from
Spirodela polyrrhiza and is a member of the PF|00005 ABC
transporter family. ESTs gb|N97039 and gb|T43169 come
from this gene
Length = 1442
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVA 387
++P R L+ GPP GKT L A+A
Sbjct: 192 VKPSRMTLLLGPPSSGKTTLLLALA 216
>At5g51070.1 68418.m06330 ATP-dependent Clp protease ATP-binding
subunit (ClpD), (ERD1) SAG15/ERD1; identical to ERD1
protein GI:497629, SP:P42762 from [Arabidopsis
thaliana]; contains Pfam profile PF02861: Clp amino
terminal domain
Length = 945
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 319 PPRGVLMYGPPGCGKTMLAKAVAHH---TTAAFIRVVGSEFVQKY 444
P +L GP G GKT L KA+A + + + +R+ SE+++++
Sbjct: 656 PIAAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERH 700
>At2g26910.1 68415.m03228 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1420
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVA 387
I P R L+ GPP GKT L A+A
Sbjct: 158 IRPSRLTLLLGPPSSGKTTLLLALA 182
>At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1109
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +1
Query: 268 VELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL 447
+E L +E+ + + V ++GP G GKT +A+A+ H+ F + + FV
Sbjct: 188 IEAHLKEMEVLLDFDYDGVKIVGIFGPAGIGKTTIARAL--HSLLLFKKFQLTCFVDNLR 245
Query: 448 GEGP 459
G P
Sbjct: 246 GSYP 249
>At1g78310.1 68414.m09126 VQ motif-containing protein contains
PF05678: VQ motif
Length = 311
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +2
Query: 41 STTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPP 163
+TT ++Y+R L+ + ++ KP+ S + +N +D+ PP
Sbjct: 25 NTTNRDHYLRQLNKLSHKISKPTNSSSSVSVANREIDLPPP 65
>At1g24290.1 68414.m03065 AAA-type ATPase family protein similar to
Werner helicase interacting protein [Homo sapiens]
GI:14349166; contains Pfam profiles PF00004: ATPase
family associated with various cellular activities
(AAA), PF00627: UBA/TS-N domain; contains
ATP/GTP-binding site motif A (P-loop)
Length = 525
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 331 VLMYGPPGCGKTMLAKAVAHHT-TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAK 492
++ +GPPG GKT +AK++ + + + R V V G + VRD AK
Sbjct: 140 IVFWGPPGTGKTSIAKSLINSSKDPSLYRFVSLSAVT----SGVKDVRDAVESAK 190
>At1g15520.1 68414.m01867 ABC transporter family protein similar to
ABC1 protein GI:14331118 from [Nicotiana
plumbaginifolia]
Length = 1423
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVA 387
++P R L+ GPP GKT L A+A
Sbjct: 177 VKPGRMALLLGPPSSGKTTLLLALA 201
>At5g11250.1 68418.m01314 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1189
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 337 MYGPPGCGKTMLAKAVAHHTTAAF 408
++GPPG GKT +A+ V + + +F
Sbjct: 262 IWGPPGIGKTTIARVVYNQLSHSF 285
>At5g04130.2 68418.m00400 DNA topoisomerase, ATP-hydrolyzing,
putative / DNA topoisomerase II, putative / DNA gyrase,
putative similar to SP|O50627 DNA gyrase subunit B (EC
5.99.1.3) {Bacillus halodurans}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00204: DNA topoisomerase II
(N-terminal region), PF00986: DNA gyrase, B subunit,
carboxyl terminus, PF01751: Toprim domain
Length = 519
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 59 YYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSIS 184
YY+R++ + R L S S ALH+HS+ L PP + S S
Sbjct: 13 YYLRLMGSRPR-LFSSSLSPALHRHSSTLSS--PPFSSPSPS 51
>At5g04130.1 68418.m00399 DNA topoisomerase, ATP-hydrolyzing,
putative / DNA topoisomerase II, putative / DNA gyrase,
putative similar to SP|O50627 DNA gyrase subunit B (EC
5.99.1.3) {Bacillus halodurans}; contains Pfam profiles
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein, PF00204: DNA topoisomerase II
(N-terminal region), PF00986: DNA gyrase, B subunit,
carboxyl terminus, PF01751: Toprim domain
Length = 732
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 59 YYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSIS 184
YY+R++ + R L S S ALH+HS+ L PP + S S
Sbjct: 13 YYLRLMGSRPR-LFSSSLSPALHRHSSTLSS--PPFSSPSPS 51
>At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1240
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 235 HGYTKTRIREAVELPLTHVELYRQI---GIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 405
+ +T +R + + H+++ Q+ ++ R + ++GPPG GKT +A+ + + +
Sbjct: 257 NSFTPSRDFDGLVGMRAHMDMLEQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDR 316
Query: 406 F 408
F
Sbjct: 317 F 317
>At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 235 HGYTKTRIREAVELPLTHVELYRQI---GIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 405
+ +T +R + + H+++ Q+ ++ R + ++GPPG GKT +A+ + + +
Sbjct: 257 NSFTPSRDFDGLVGMRAHMDMLEQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDR 316
Query: 406 F 408
F
Sbjct: 317 F 317
>At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 235 HGYTKTRIREAVELPLTHVELYRQI---GIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 405
+ +T +R + + H+++ Q+ ++ R + ++GPPG GKT +A+ + + +
Sbjct: 257 NSFTPSRDFDGLVGMRAHMDMLEQLLRLDLDEVRIIGIWGPPGIGKTTIARFLLNQVSDR 316
Query: 406 F 408
F
Sbjct: 317 F 317
>At3g44480.1 68416.m04781 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1194
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +1
Query: 235 HGYTKTRIREAVELPLTHVELYRQI---GIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAA 405
+ +T +R + + H+++ Q+ ++ R + ++GPPG GKT +A+ + + +
Sbjct: 261 NSFTPSRDFDGLVGMRAHMDMLEQLLRLDLDEVRMIGIWGPPGIGKTTIARFLFNQVSDR 320
Query: 406 F 408
F
Sbjct: 321 F 321
>At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1981
Score = 27.9 bits (59), Expect = 7.3
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +1
Query: 304 QIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAF 408
++ ++ R + ++GPPG GKT +A+ + + +F
Sbjct: 217 RLDLDDVRMIGIWGPPGIGKTTIARFLLSQVSKSF 251
>At5g66910.1 68418.m08434 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 815
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1
Query: 331 VLMYGPPGCGKTML 372
V++ GPPGCGKT L
Sbjct: 192 VVVSGPPGCGKTTL 205
>At5g58120.1 68418.m07272 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1046
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 337 MYGPPGCGKTMLAKAVAHHTTAAF 408
+YGP G GKT +A+A+ +++F
Sbjct: 215 IYGPAGIGKTTIARALHSRLSSSF 238
>At5g44510.1 68418.m05453 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1187
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 268 VELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAV 384
+E T + Q+ +E R + ++GP G GKT +++ +
Sbjct: 216 IEAHTTEITSLLQLDLEEVRMIGIWGPAGIGKTTISRVL 254
>At5g40910.1 68418.m04967 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Non-consensus TT donor splice site at exon 1
Length = 1104
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = +1
Query: 268 VELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAHHTTAAF 408
+E LT ++ + + + + + ++GP G GKT +A+A+ + + F
Sbjct: 188 LEAHLTKLDSFLCLESDDVKMIGIWGPAGIGKTTIARALFNQLSTGF 234
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
Pfam PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 361 KTMLAKAVAHHTTAAFIRVVGSEFV-QKYLGEGPRMVRDVFRLAK-ENSPAI 510
K A+AVA H A I V GS+ Q+ + P M++ V RLA +N+P++
Sbjct: 719 KEAQARAVAEHGELALITVEGSQAAKQERISLRPPMLQ-VVRLASFQNAPSV 769
>At4g30490.1 68417.m04329 AFG1-like ATPase family protein contains
Pfam profile: PF03969 AFG1-like ATPase
Length = 497
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 295 LYRQIGIEPPRGVLMYGPPGCGKTML 372
L Q P +G+ +YG G GKTML
Sbjct: 152 LMPQTSYSPVKGLYLYGGVGTGKTML 177
>At1g73170.1 68414.m08466 expressed protein
Length = 666
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 313 IEPPRGVLMYGPPGCGKTMLAKAVA 387
++ +L+ GPPG GKT + + VA
Sbjct: 194 VQDGNSLLLIGPPGVGKTTMIREVA 218
>At1g66330.2 68414.m07533 senescence-associated family protein
similar to senescence-associated protein (GI:12836895)
[Ipomoea batatas]
Length = 417
Score = 27.5 bits (58), Expect = 9.7
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 116 VALHKHSNALVDVLPPEADSS-ISMLQADEKPDVQ-YSDIGGMD-TQKQELEKLLNSLSL 286
++L K+ AL P E S IS ++ K S+ G+D T +ELE L+ +L
Sbjct: 254 ISLEKNGIAL-GFFPGEVSSDRISAIEEAYKSMASALSEADGIDYTDPEELELLVTTLID 312
Query: 287 MWSCTGKLVLSLLGVCS 337
+ + GK SLL CS
Sbjct: 313 LDAMDGKSSASLLAECS 329
>At1g66330.1 68414.m07532 senescence-associated family protein
similar to senescence-associated protein (GI:12836895)
[Ipomoea batatas]
Length = 417
Score = 27.5 bits (58), Expect = 9.7
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 116 VALHKHSNALVDVLPPEADSS-ISMLQADEKPDVQ-YSDIGGMD-TQKQELEKLLNSLSL 286
++L K+ AL P E S IS ++ K S+ G+D T +ELE L+ +L
Sbjct: 254 ISLEKNGIAL-GFFPGEVSSDRISAIEEAYKSMASALSEADGIDYTDPEELELLVTTLID 312
Query: 287 MWSCTGKLVLSLLGVCS 337
+ + GK SLL CS
Sbjct: 313 LDAMDGKSSASLLAECS 329
>At1g63160.1 68414.m07138 replication factor C 40 kDa, putative
similar to SWISS-PROT:Q9WUK4 activator 1 40 kDa subunit
(Replication factor C 40 kDa subunit, A1 40 kDa subunit,
RF-C 40 kDa subunit, RFC40) [Mus musculus]
Length = 333
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +1
Query: 229 WRHGYTKTRIREAV--ELPLTHVELYRQIGIEPPRGVLMYGPPGCGKTMLAKAVAH 390
W Y +++ + V E ++ +++ + G P +++ GPPG GKT A+AH
Sbjct: 17 WVEKYRPSKVVDIVGNEDAVSRLQVIARDGNMP--NLILSGPPGTGKTTSILALAH 70
>At1g21840.1 68414.m02733 expressed protein weak similarity to
SP|Q07402 Urease accessory protein ureF [strain TB-90]
{Bacillus sp.}
Length = 240
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -1
Query: 272 STASLILVFVYPCLQYPNIE 213
+TASL+L FVY L+ P+IE
Sbjct: 66 NTASLLLPFVYSALKSPDIE 85
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,753,379
Number of Sequences: 28952
Number of extensions: 326605
Number of successful extensions: 1343
Number of sequences better than 10.0: 155
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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