Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00453
         (649 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   6.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +2

Query: 137 FVRYPASRYKVFKLILNLCYLIALQHQQVKYV 232
           ++    S+YK  +L++ LC    L H+  K +
Sbjct: 195 YIEESISKYKHAELVMPLCKSCDLHHRLSKLI 226


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +2

Query: 80  NYPYSTRKKILSLMTSHQYFVRYPASRYKVFKLILNLCYLI 202
           ++ + + K + + +TS  Y      S YK FK+ + L  LI
Sbjct: 54  HFTFKSWKVLYTSLTSFGYLFCASLSFYKAFKIGILLNQLI 94


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 468  TFFQANVMHGSIFWC 424
            +FF A  +H   FWC
Sbjct: 1014 SFFIAACLHPQEFWC 1028


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 468  TFFQANVMHGSIFWC 424
            +FF A  +H   FWC
Sbjct: 1014 SFFIAACLHPQEFWC 1028


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 468  TFFQANVMHGSIFWC 424
            +FF A  +H   FWC
Sbjct: 1014 SFFIAACLHPQEFWC 1028


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 468  TFFQANVMHGSIFWC 424
            +FF A  +H   FWC
Sbjct: 1014 SFFIAACLHPQEFWC 1028


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,523
Number of Sequences: 336
Number of extensions: 3401
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)