Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00451
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.1  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.0  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 466 ICLYKYPILC*H*MC*DYFKFCSLINVTR*L*LHCTYHF 582
           +C+Y + +     +C  YF    +I     L L C YHF
Sbjct: 131 LCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHF 169



 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -2

Query: 319 LIFTIHFIYLEHQFIFKLFTLIT*LY 242
           +IFT+HF+   + F +    L+   Y
Sbjct: 90  IIFTVHFLLCTYYFYYAFIILLCVYY 115



 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 668 FILY*HFFITPIFSNRSTYYIF 603
           F+L  ++F+ P+F     YY +
Sbjct: 129 FLLCIYYFVVPLFFLLCIYYFY 150


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 457 SKSKINPMTVQIKLLFYFKQIHQHQYLYKYIECST 353
           +  +I   T +I ++   K + QH Y+   I C T
Sbjct: 490 TSEEIRQFTQEINIM---KSVRQHPYIVSLIGCVT 521


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 652 ISLLHLYFQIGVLTTF 605
           I L +LYF + V++TF
Sbjct: 217 IQLYYLYFDVIVISTF 232


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 652 ISLLHLYFQIGVLTTF 605
           I L +LYF + V++TF
Sbjct: 143 IQLYYLYFDVIVISTF 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,883
Number of Sequences: 336
Number of extensions: 3857
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)