Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00451
         (755 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY359054-1|AAQ89413.1|  255|Homo sapiens ATWD578 protein.              32   1.9  
AK124779-1|BAC85944.1|  163|Homo sapiens protein ( Homo sapiens ...    31   5.9  

>AY359054-1|AAQ89413.1|  255|Homo sapiens ATWD578 protein.
          Length = 255

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
 Frame = -2

Query: 460 YSKSKINPMTVQIKLLFYFKQIHQHQYLYKYIECSTSLKSWLQQLTTLIFTIHFIYL--E 287
           Y+    + M++ I L+F+  +I    ++++    +TSL+SW+  +  + F +  + L  E
Sbjct: 134 YAAMVFHYMSITI-LVFFMMEIIFKLFVFRLSSFTTSLRSWMPVVVVVSFILDIVLLFQE 192

Query: 286 HQF 278
           HQF
Sbjct: 193 HQF 195


>AK124779-1|BAC85944.1|  163|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42789 fis, clone BRAWH3007221. ).
          Length = 163

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = -2

Query: 442 NPMTVQIKLLFYFKQIHQHQYLYKYIEC-STSLKSWLQQLTTLIFTIHFIYLEHQFIFKL 266
           +P+++ + LLF F  +    +L     C ++SL  +L    + +F  HF+YL     F+L
Sbjct: 45  HPLSLSVSLLFLFS-VSPSDHLTPLACCLASSLSPFLSLFVSSLFLTHFLYLAASPCFRL 103


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,917,391
Number of Sequences: 237096
Number of extensions: 1818333
Number of successful extensions: 2759
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2759
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)