Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00450
(810 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1393.03 |rps1501|rps15-1|40S ribosomal protein S15|Schizosac... 112 6e-26
SPAC1071.07c |rps1502|rps15-2, rps15|40S ribosomal protein S15|S... 112 6e-26
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 100 5e-22
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 68 1e-12
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 52 7e-08
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 52 1e-07
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 52 1e-07
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 50 3e-07
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 50 3e-07
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 50 4e-07
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 49 9e-07
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 48 1e-06
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 48 2e-06
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 46 5e-06
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 46 8e-06
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 44 2e-05
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 43 6e-05
SPAC1751.02c |rsm19||mitochondrial ribosomal protein subunit S19... 37 0.003
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 36 0.007
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 34 0.027
SPBC2D10.09 |||3-hydroxyisobutyryl-CoA hydrolase|Schizosaccharom... 28 1.8
SPBC30D10.16 |pha2||phrenate dehydratase|Schizosaccharomyces pom... 27 2.4
SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces pomb... 27 4.2
SPBC18H10.21c ||SPBC9B6.01c|dubious|Schizosaccharomyces pombe|ch... 27 4.2
SPAC15E1.05c |||ethanolamine-phosphate cytidylyltransferase |Sch... 26 5.5
SPBC19G7.02 |||4-amino-4-deoxychorismate lyase |Schizosaccharomy... 26 5.5
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 26 7.3
SPAC212.04c |||S. pombe specific DUF999 family protein 1|Schizos... 25 9.6
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 25 9.6
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 25 9.6
>SPCC1393.03 |rps1501|rps15-1|40S ribosomal protein
S15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 153
Score = 112 bits (269), Expect = 6e-26
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = -2
Query: 254 IVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 96
+VGIYNGK FNQVEI+PEMIGHYLGEFS+TYKP KHGRPGIGATHSSRFIPLK
Sbjct: 101 VVGIYNGKLFNQVEIRPEMIGHYLGEFSITYKPTKHGRPGIGATHSSRFIPLK 153
Score = 103 bits (247), Expect = 3e-23
Identities = 51/87 (58%), Positives = 62/87 (71%)
Frame = -3
Query: 511 QKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVKKLRRAKKE 332
+KKR FR F YRGV+L+QLLD+ EQL++L H RGL ++KLR+AK E
Sbjct: 15 RKKRSFRTFAYRGVELEQLLDLSAEQLVDLFHARARRRMLRGLGPNASRFIRKLRKAKTE 74
Query: 331 APPNEKPEIVKTHLRNMIIVPEMVGSL 251
AP NEKP VKTHLRNMII+PEMVGS+
Sbjct: 75 APLNEKPATVKTHLRNMIILPEMVGSV 101
>SPAC1071.07c |rps1502|rps15-2, rps15|40S ribosomal protein
S15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 154
Score = 112 bits (269), Expect = 6e-26
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = -2
Query: 254 IVGIYNGKTFNQVEIKPEMIGHYLGEFSVTYKPVKHGRPGIGATHSSRFIPLK 96
+VGIYNGK FNQVEI+PEMIGHYLGEFS+TYKP KHGRPGIGATHSSRFIPLK
Sbjct: 102 VVGIYNGKLFNQVEIRPEMIGHYLGEFSITYKPTKHGRPGIGATHSSRFIPLK 154
Score = 104 bits (249), Expect = 2e-23
Identities = 51/87 (58%), Positives = 62/87 (71%)
Frame = -3
Query: 511 QKKRIFRKFTYRGVDLDQLLDMPNEQLMELMHXXXXXXXXRGLKRKPMALVKKLRRAKKE 332
+KKR FR F YRGV+L+QLLD+ EQL++L H RGL ++KLR+AK E
Sbjct: 16 RKKRTFRTFAYRGVELEQLLDLSAEQLVDLFHARARRRMLRGLGPNASRFIRKLRKAKSE 75
Query: 331 APPNEKPEIVKTHLRNMIIVPEMVGSL 251
AP NEKP VKTHLRNMII+PEMVGS+
Sbjct: 76 APLNEKPATVKTHLRNMIILPEMVGSV 102
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 99.5 bits (237), Expect = 5e-22
Identities = 42/96 (43%), Positives = 66/96 (68%)
Frame = +3
Query: 522 GKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 701
GKSALT+Q + F+++YDPTIED YRK+ E+D +L++LDTAG E++++MR+ Y++
Sbjct: 20 GKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVLDTAGQEEYSAMREQYMRT 79
Query: 702 GQGFVVVYSINKPPNVSRHQTMKELITRVKGSERVP 809
G+GF++VY+I + T + I RVK + P
Sbjct: 80 GEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFP 115
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 68.1 bits (159), Expect = 1e-12
Identities = 34/96 (35%), Positives = 55/96 (57%)
Frame = +3
Query: 522 GKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIKN 701
GKS+LTVQ+V F+E Y PTIE+ + K I+ EI+DTAG ++++ + +
Sbjct: 18 GKSSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIG 77
Query: 702 GQGFVVVYSINKPPNVSRHQTMKELITRVKGSERVP 809
G+V+VYSI + + +++ I G+E VP
Sbjct: 78 IHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVP 113
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 52.4 bits (120), Expect = 7e-08
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 522 GKSALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIK 698
GK+ L QFV+ F +Y TI DF K++ VD+ L++ DTAG E+F S+ + +
Sbjct: 20 GKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQERFQSLGMAFYR 79
Query: 699 NGQGFVVVYSIN 734
V+VY++N
Sbjct: 80 GADCCVIVYNVN 91
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 52.0 bits (119), Expect = 1e-07
Identities = 26/83 (31%), Positives = 43/83 (51%)
Frame = +3
Query: 513 GFRGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLY 692
G GK+ L + F G F E Y PT+ + Y ++EVD L + DTAG E + +R L
Sbjct: 15 GACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQEDYDRLRPLS 74
Query: 693 IKNGQGFVVVYSINKPPNVSRHQ 761
+ ++ +S++ P ++ Q
Sbjct: 75 YPDSHVVLICFSVDAPESLDNVQ 97
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 51.6 bits (118), Expect = 1e-07
Identities = 25/83 (30%), Positives = 43/83 (51%)
Frame = +3
Query: 513 GFRGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLY 692
G GK+ L + F G F E Y PT+ + Y ++EVD L + DTAG E + +R L
Sbjct: 15 GACGKTCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQEDYDRLRPLS 74
Query: 693 IKNGQGFVVVYSINKPPNVSRHQ 761
+ ++ ++++ P ++ Q
Sbjct: 75 YPDSHVILICFAVDSPDSLDNVQ 97
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 50.4 bits (115), Expect = 3e-07
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 522 GKSALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIK 698
GK+++ Q+V+ F + Y TI DF KE+ VD+ L++ DTAG E+F S+ + +
Sbjct: 20 GKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERFQSLGVAFYR 79
Query: 699 NGQGFVVVYSIN 734
V+VY +N
Sbjct: 80 GADCCVLVYDVN 91
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 50.4 bits (115), Expect = 3e-07
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +3
Query: 522 GKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIK 698
GKS L ++F + E Y TI DF + E++ L+I DTAG E+F ++ Y +
Sbjct: 20 GKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYR 79
Query: 699 NGQGFVVVYSINKPPNVSRHQTMKELITR--VKGSERV 806
G ++VY + + + + + I R V+G R+
Sbjct: 80 GAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRL 117
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 50.0 bits (114), Expect = 4e-07
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +3
Query: 522 GKSALTVQFVSGCFMEKYDPTI-EDFYRKEIEVDNSPCV-LEILDTAGTEQFASMRDLYI 695
GKS+L ++FV F + + TI F + + +D + V LEI DTAG E++ S+ +Y
Sbjct: 26 GKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYY 85
Query: 696 KNGQGFVVVYSINKPPNVSRHQT-MKEL 776
+N +VVY I + ++ + ++ +KEL
Sbjct: 86 RNANCAIVVYDITQAASLEKAKSWIKEL 113
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 48.8 bits (111), Expect = 9e-07
Identities = 23/76 (30%), Positives = 37/76 (48%)
Frame = +3
Query: 513 GFRGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLY 692
G GK+ L + + + F Y PT+ D Y + + + P L + DTAG E + +R L
Sbjct: 12 GAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLS 71
Query: 693 IKNGQGFVVVYSINKP 740
F+V +S+ P
Sbjct: 72 YPQTDVFLVCFSVTSP 87
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 48.4 bits (110), Expect = 1e-06
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +3
Query: 522 GKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEIL--DTAGTEQFASMRDLYI 695
GK+ L + F SG F E+Y PT+ + Y +I + V+E+ DTAG E++ +R L
Sbjct: 26 GKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEEYDRLRPLSY 85
Query: 696 KNGQGFVVVYSINKPPNVS 752
N ++ +SI+ P +++
Sbjct: 86 PNSNVILLCFSIDCPASLN 104
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 48.0 bits (109), Expect = 2e-06
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +3
Query: 513 GFRGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLY 692
G GK++L F G F + Y+PTI + Y +I VD + L + DTAG E++ +R L
Sbjct: 22 GAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLS 81
Query: 693 IKNGQGFVVVYSIN 734
+ ++ ++++
Sbjct: 82 YSDTHVIMICFAVD 95
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 46.4 bits (105), Expect = 5e-06
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 522 GKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIK 698
GKS L ++F F + TI DF + IE+D L+I DTAG E+F ++ Y +
Sbjct: 21 GKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYR 80
Query: 699 NGQGFVVVYSI 731
G +++Y +
Sbjct: 81 GAMGILLLYDV 91
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 45.6 bits (103), Expect = 8e-06
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +3
Query: 513 GFRGKSALTVQFVSGCFMEKYDPTIEDFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLY 692
G GK++L F G F +Y PT+ + Y + VD L + DTAG E++ +R +
Sbjct: 17 GACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEEYERLRPMS 76
Query: 693 IKNGQGFVVVYSINKPPNVSRHQT 764
+V ++I+ P ++ T
Sbjct: 77 YAKAHIILVGFAIDSPDSLENVST 100
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 44.4 bits (100), Expect = 2e-05
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +3
Query: 522 GKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIK 698
GK++L +F+ F Y TI DF K + +++ L++ DTAG E+F S+ YI+
Sbjct: 23 GKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIR 82
Query: 699 NGQGFVVVYSI 731
+ ++VY I
Sbjct: 83 DSSVAIIVYDI 93
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 42.7 bits (96), Expect = 6e-05
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +3
Query: 522 GKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDLYIK 698
GKS L ++F F + TI +F + I +DN +I DTAG E++ ++ Y +
Sbjct: 22 GKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYR 81
Query: 699 NGQGFVVVYSINK 737
G ++VY I K
Sbjct: 82 GAVGALIVYDITK 94
>SPAC1751.02c |rsm19||mitochondrial ribosomal protein subunit
S19|Schizosaccharomyces pombe|chr 1|||Manual
Length = 108
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -2
Query: 245 IYNGKTFNQVEIKPEMIGHYLGEFSVTYK 159
++NGK++ V+I +MIGH LGEF+ T K
Sbjct: 70 VHNGKSYANVKITEDMIGHKLGEFAPTRK 98
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 35.9 bits (79), Expect = 0.007
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Frame = +3
Query: 522 GKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEV----DNSPCVLEILDTAGTEQFASMRD 686
GKS L +FV + ++ T+ DF + I V L+I DTAG E+F S+
Sbjct: 21 GKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAGQEKFRSVAR 80
Query: 687 LYIKNGQGFVVVYSI 731
Y + G V+VY +
Sbjct: 81 NYYRGAAGAVLVYDV 95
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 33.9 bits (74), Expect = 0.027
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +3
Query: 513 GFRGKSALTVQFVSGCFMEKYDPTIE-DFYRKEIEVDNSPCVLEILDTAGTEQFASMRDL 689
G GK+ + ++G F +KY T+ + + + + DTAG E+ +RD
Sbjct: 18 GGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQEKLGGLRDG 77
Query: 690 YIKNGQGFVVVYSI 731
Y GQ ++++ +
Sbjct: 78 YYIQGQCGIIMFDV 91
>SPBC2D10.09 |||3-hydroxyisobutyryl-CoA
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 429
Score = 27.9 bits (59), Expect = 1.8
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = -3
Query: 664 SVPAVSKISKTQGELSTSISFL*KSSIVGSYFSIKHPDTNCTVNALFPRNPQKKRIFRKF 485
S+ +++ K+ + S S +F IV SY+ +K PD VNA + + +
Sbjct: 330 SIAVTNRLIKSAAKWSISEAFY-YDHIV-SYYMLKQPDFVEGVNAQLITKTKNPKWSKSH 387
Query: 484 TYRGVDLDQLLDMPNE 437
Y DL+ +P+E
Sbjct: 388 EYHFKDLENYFKLPSE 403
>SPBC30D10.16 |pha2||phrenate dehydratase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 287
Score = 27.5 bits (58), Expect = 2.4
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = -1
Query: 528 SFRETLKKSVFSGSSLTGELISISSLICPMSNSWN 424
S T + + + +TG +++ISS +C + N +N
Sbjct: 140 SVSSTSQAAALASKDITGTIVAISSELCAVENQFN 174
>SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 505
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 103 GMNLELCVAPIPGLPCFTGLYVTENS 180
G+N+ LCV PG P TG ++ENS
Sbjct: 241 GINVRLCVVINPGNP--TGACISENS 264
>SPBC18H10.21c ||SPBC9B6.01c|dubious|Schizosaccharomyces pombe|chr
2|||Manual
Length = 157
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 337 KEAPPNEKPEIVKTHLRNMIIVPEMVG 257
K A P++KP + THL +++I VG
Sbjct: 60 KRARPSQKPPLRSTHLPHLLIFALFVG 86
>SPAC15E1.05c |||ethanolamine-phosphate cytidylyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 365
Score = 26.2 bits (55), Expect = 5.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 112 LELCVAPIPGLPCFTGLYVTE 174
LELC PG+P G++ E
Sbjct: 222 LELCTRMFPGIPIMAGIFADE 242
>SPBC19G7.02 |||4-amino-4-deoxychorismate lyase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 231
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 566 GKI*SDDRGFLQKRN-RSGQFSLCFRNF 646
G I DD+G LQK N ++G+ L F +F
Sbjct: 175 GSIHEDDKGLLQKDNLKNGEQVLLFNSF 202
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 25.8 bits (54), Expect = 7.3
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +3
Query: 231 FSVVNADNEPTISGTMIMFLK*VFTISGFSFGGASFLARRSFL 359
F VV +N PT +G +I VFTI +FG F RR L
Sbjct: 365 FEVVGFNN-PTATGLIIAATNFVFTI--VAFGVIDFFGRRILL 404
>SPAC212.04c |||S. pombe specific DUF999 family protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 288
Score = 25.4 bits (53), Expect = 9.6
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +1
Query: 589 RISTEKKSKWTILLVF 636
RIST+ KS+W +L+++
Sbjct: 98 RISTQDKSRWVLLIIW 113
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 25.4 bits (53), Expect = 9.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 239 NGKTFNQVEIKPEMIGHYLGEFSVTYKPV 153
N +TF+ E E + +F VT KP+
Sbjct: 829 NSETFDDFEFSVEQFNSLINQFVVTGKPI 857
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 9.6
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 687 LYIKNGQGFVVVYSINKPPNVSRHQTMKE 773
L ++ QG + V + N+SRH+T+ E
Sbjct: 54 LAVQQWQGLIAVNYAARAANISRHETVTE 82
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,181,136
Number of Sequences: 5004
Number of extensions: 65986
Number of successful extensions: 199
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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