Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00449
(751 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45177| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.046
SB_58458| Best HMM Match : Guanylate_cyc (HMM E-Value=1.2e-36) 33 0.33
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 33 0.33
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_16625| Best HMM Match : Death (HMM E-Value=1.5) 31 1.3
SB_1307| Best HMM Match : Filament (HMM E-Value=0.13) 31 1.3
SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1) 30 1.7
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 30 1.7
SB_21837| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_8710| Best HMM Match : PKD_channel (HMM E-Value=0) 30 2.3
SB_45410| Best HMM Match : DUF29 (HMM E-Value=2.3) 30 2.3
SB_57944| Best HMM Match : OmpH (HMM E-Value=6.6) 29 3.0
SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033) 29 3.0
SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0) 29 4.0
SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28) 29 5.3
SB_47366| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019) 28 7.0
SB_21459| Best HMM Match : LRR_1 (HMM E-Value=1.8e-11) 28 7.0
SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083) 28 9.3
SB_36254| Best HMM Match : Filament (HMM E-Value=0.21) 28 9.3
SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_23569| Best HMM Match : PAN (HMM E-Value=0.0015) 28 9.3
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 28 9.3
SB_2892| Best HMM Match : RasGAP_C (HMM E-Value=0.83) 28 9.3
>SB_45177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 35.5 bits (78), Expect = 0.046
Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Frame = +3
Query: 255 NKMLMKIRDILLKFTENLPMNNRNDNISVTVKNDLSQI----ENITSKLEKTLTNNNVKL 422
+K+L + ILL+ E PM+ + + +T +DLS++ E + ++ K + +N +
Sbjct: 578 SKLLPQYYTILLRQIEQDPMSKSSFDALITATDDLSKMWHSSEIVKQEITKLIPKHNENI 637
Query: 423 YNATNTIADESRKTNDLLETMLRILS 500
T + +ES + L+ + R++S
Sbjct: 638 LKITERVMNESGSADSGLDRLERVIS 663
>SB_58458| Best HMM Match : Guanylate_cyc (HMM E-Value=1.2e-36)
Length = 1065
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 366 IENITSKLEKTLTNNNVKLYNATNTIADESRKTNDLLETML 488
++N+ + LEK N + T+ +ADE RKT +LL ML
Sbjct: 694 MDNMVNLLEKYANNLESLVEERTSQLADEKRKTENLLNRML 734
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 32.7 bits (71), Expect = 0.33
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = +2
Query: 452 EQKN*RLVRDNVENFILSTKIITTNPTIVKGNATYENLVSYVNEIKQNIEDRWKERQNVL 631
E+KN + NVE +S K+ N K A +++ S K I ++ +++ VL
Sbjct: 155 ERKNHEIQNLNVEWNTMSEKLSAANIAKCKAEAALDDIESQGTSFK--IREKRMDQEKVL 212
Query: 632 NDLQND--IAQLHSRIEVLA-MTEEPRHERLSKAQD 730
QN+ A+L ++ E LA + +E ++L+K+++
Sbjct: 213 LQKQNESLSAELKAKTEELATIRKEKSRDQLAKSEE 248
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 32.3 bits (70), Expect = 0.43
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +3
Query: 300 ENLPMNNRNDNISVTVKNDLSQIENITSKLEKTLTNNNVKLYNATNTIADESRKTND 470
E+ NN +DN + T ND + ENI EK + N + NT D + TND
Sbjct: 73 EDNDKNNNDDNNNKTNDNDTND-ENINDDNEKNTNDKNNNDDSNENTNDDNDKNTND 128
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 282 ILLKFTENLPMNN--RNDNISVTVKNDLSQIENIT--SKLEKTLTNNNVKLYNATNTIAD 449
I +K EN +++ R NI++ ND + +N + TNNN K N NT D
Sbjct: 15 IEVKAVENKHLHSITRTTNININENNDNTNDDNNKHINDDNDNKTNNNDKDTNDDNTNED 74
Query: 450 ESRKTND 470
+ ND
Sbjct: 75 NDKNNND 81
>SB_47830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 32.3 bits (70), Expect = 0.43
Identities = 20/54 (37%), Positives = 29/54 (53%)
Frame = +3
Query: 279 DILLKFTENLPMNNRNDNISVTVKNDLSQIENITSKLEKTLTNNNVKLYNATNT 440
D+L K +E P + NDNI+V +K+D +NIT L ++NN Y T
Sbjct: 393 DVLTKDSEGNPSYSENDNINVRIKSD----QNIT--LTAKISNNKDGTYKVNYT 440
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.5 bits (68), Expect = 0.76
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 452 EQKN*RLVR--DNVENFILSTKIITTNPTIVKGNATYENLVSYVNEIKQNIEDRWKERQN 625
E KN L R + +E+F TK+ + N+ + + V ++++ +ED+ +E +
Sbjct: 2670 ENKNLELQRLTNQIEDF--KTKLSEVEGRVKAANSEKKTIEDEVKKLRETVEDK-EELEE 2726
Query: 626 VLNDLQNDIAQLHSRIE 676
+L ++++ +LH IE
Sbjct: 2727 ILGEMRDKRKRLHDDIE 2743
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 31.5 bits (68), Expect = 0.76
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Frame = +2
Query: 473 VRDNVENFI--LSTKIITTNPTIVKGNATYENLVSYVNEIKQNIEDRWKERQNVLNDLQN 646
V + +EN + L K+ +N + + E+L + + +++N+ED QN L D
Sbjct: 800 VVEELENKLSKLQEKLEQSNQQLAAKSKRIESLNAEMGVLRENLEDERTVVQN-LEDRIG 858
Query: 647 DIAQLHSRIEVLAMTEEPRHERLSKAQDSSPATN 748
+ Q H +E+ + E+ + + S +D+S T+
Sbjct: 859 GLIQKHD-VEINQLKEKAKEHQASTDEDASAITS 891
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 303 NLPMNNRNDNISVTVKNDLSQIENITSKLEKTLTNNNVKLYNATNTI 443
N +NN N+N S+ +N+ + I N + ++ NNN + N ++I
Sbjct: 1744 NNSINNCNNNNSINNRNNNNSINNRNNTNNNSINNNNSSINNNNSSI 1790
>SB_16625| Best HMM Match : Death (HMM E-Value=1.5)
Length = 528
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Frame = +3
Query: 246 RRRNKMLMKIRDILLKFTENLPMNNRNDNISVTVKNDLSQIENIT----SKLEKTLTNNN 413
R+ K+L + ILL+ E PM+ + + T +DLS++ + + ++ K + +N
Sbjct: 439 RQLAKLLPQYYTILLRNIEQDPMSKSSLDALKTATDDLSKMWHSSKIGKQEITKLIPKHN 498
Query: 414 VKLYNATNTIADESRKTNDLLETMLRILS 500
+ T + +ES + L+ + R++S
Sbjct: 499 ENILKITERVMNESGSADSGLDRLERVIS 527
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 255 NKMLMKIRDILLKFTENLPMNNRNDNISVTVKNDLSQIEN 374
+++ +K LLK E PM+ R+ N +T +DLS+ +
Sbjct: 392 DEIFLKYHTFLLKNIEQEPMSERSHNALITATHDLSEFSS 431
>SB_1307| Best HMM Match : Filament (HMM E-Value=0.13)
Length = 916
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 578 NEIKQNIEDRWKERQNVLNDLQNDIAQLHSRIEVLAMTEEPRHERLSK 721
NE+ Q++E R +E ++ +D+Q + L I+ L EE R E +S+
Sbjct: 362 NEVIQSLESRIEEELSIKSDIQTHVHTLERNIQAL---EEERKELVSR 406
>SB_16870| Best HMM Match : Methyltransf_3 (HMM E-Value=1)
Length = 766
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Frame = +3
Query: 255 NKMLMKIRDILLKFTENLPMNNRNDNISVTVKNDLSQIENITS----KLEKTLTNNNVKL 422
+K+L + ILL+ E PM+ + + T +DLS++ + + ++ K + +N +
Sbjct: 454 SKLLPQYYTILLRKIEQDPMSKSSLDALKTATDDLSKMWHSSEIGKHEITKLIPKHNENM 513
Query: 423 YNATNTIADESRKTNDLLETMLRILS 500
T + +ES + L+ + R++S
Sbjct: 514 LKITERVMNESGSADSGLDRLERVIS 539
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 255 NKMLMKIRDILLKFTENLPMNNRNDNISVTVKNDLSQIEN 374
+++ +K LLK E PM+ R+ N + +DLS+ +
Sbjct: 404 DEIFLKYHTFLLKNIEQEPMSERSHNALIAATHDLSEFSS 443
>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
Length = 1381
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/49 (24%), Positives = 29/49 (59%)
Frame = +2
Query: 590 QNIEDRWKERQNVLNDLQNDIAQLHSRIEVLAMTEEPRHERLSKAQDSS 736
Q +E ++ + DL++++++L+S+ + L M +HE + QD++
Sbjct: 925 QKLESNLEDAEKKCKDLEDEVSKLYSQKQTLLMNILKQHEEEVEGQDNA 973
>SB_21837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 43 MGTNLKKLSIGGNPLPCEII-VKFKQNDVPFELTSLRIDEHSAENFEGIACNVNR 204
+G +++ + +G NP+PC +K+ EL +L +D HS +N +A N +
Sbjct: 26 VGNSIEAIGLGQNPVPCNTAGIKWYAAHSLAELYAL-LDHHSNDNVRMMAGNTGK 79
>SB_8710| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 1627
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = -1
Query: 499 DKILN--IVSNKSLVFLLSSAIVFVALYN-FTLLLVKVFSNLLVMFSI*LKSFLTVTEIL 329
+KI++ +V +S +LLS + +FV ++ F L VF N L+++S +KSF+ E++
Sbjct: 1457 EKIISFTLVIKRSKPYLLSISFLFVVVFMAFAQLGNLVFGNDLLIYSTMIKSFVNEFEMI 1516
>SB_45410| Best HMM Match : DUF29 (HMM E-Value=2.3)
Length = 175
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 587 KQNIEDRW-KERQNVLNDLQNDIAQLHSRIEVLAMTEEPRH 706
K + D+W +E+Q + L + +LH +E+L M + H
Sbjct: 58 KMSESDQWFEEKQQQIETLDQQLKKLHHNVEILVMHRKGNH 98
>SB_57944| Best HMM Match : OmpH (HMM E-Value=6.6)
Length = 416
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 357 LSQIENITSKLEKTLTNNNVKLYNATNTIADESRKTNDLLE 479
+ Q+EN+ K+ L NNNVK+ + ++ D++ + LE
Sbjct: 112 VEQLENLKPKVRAFLANNNVKIEDIYMSLVDKTLGIDKTLE 152
>SB_50638| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00033)
Length = 311
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 533 IVKGNATYENLVSYVNEIKQNIEDRWKERQNVLNDLQNDIAQLHSRIEVL 682
+ K +A YE L +E+++++ D +E+ + DL+ D+ + E L
Sbjct: 120 LAKLSAKYEELEDEKDEMQESLSDTIREKSREIRDLEADLEMSEQKYEDL 169
>SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0)
Length = 1291
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = -1
Query: 463 VFLLSSAIVFVALYNFTLLLVKVFSNLLVMFSI*LKSFLTVTEILSFRLFMGKFSV 296
+ + S I+F+ +++ T+L + VFS ++ ++ L +T LF+ FS+
Sbjct: 1139 ITVFSVIILFITVFSVTILFITVFSVTILFITVFSVIILFITVFSVIILFITVFSI 1194
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = -1
Query: 463 VFLLSSAIVFVALYNFTLLLVKVFSNLLVMFSI*LKSFLTVTEILSFRLFMGKFSV 296
+ + S I+F+ +++ +L + VFS +++ ++ + L +T LF+ FSV
Sbjct: 1119 ITVFSVIILFITVFSVIILFITVFSVIILFITVFSVTILFITVFSVTILFITVFSV 1174
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/63 (22%), Positives = 33/63 (52%)
Frame = -1
Query: 484 IVSNKSLVFLLSSAIVFVALYNFTLLLVKVFSNLLVMFSI*LKSFLTVTEILSFRLFMGK 305
++ + + + S I+F+ +++ +L + VFS +++ ++ L +T LF+
Sbjct: 1102 VLRHHPFITVFSVIILFITVFSVIILFITVFSVIILFITVFSVIILFITVFSVTILFITV 1161
Query: 304 FSV 296
FSV
Sbjct: 1162 FSV 1164
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = -1
Query: 463 VFLLSSAIVFVALYNFTLLLVKVFSNLLVMFSI*LKSFLTVTEILSFRLFMGKFSV 296
+ + S I+F+ +++ +L + VFS ++ ++ + L +T LF+ FSV
Sbjct: 1129 ITVFSVIILFITVFSVIILFITVFSVTILFITVFSVTILFITVFSVIILFITVFSV 1184
>SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28)
Length = 327
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 297 TENLPMNNRNDNISVTVKNDLSQIENITSKLEKTLTNNNVKLYNATNTIADESRKTND 470
T N + RN+N S + N+ + N ++ +NNN N+ N+ ++ + T +
Sbjct: 144 TSNSNNSTRNNNNSTSNSNNSTSNSNNSTSNSNNSSNNNNSTSNSNNSTSNSNNSTRN 201
Score = 28.7 bits (61), Expect = 5.3
Identities = 19/64 (29%), Positives = 25/64 (39%)
Frame = +3
Query: 297 TENLPMNNRNDNISVTVKNDLSQIENITSKLEKTLTNNNVKLYNATNTIADESRKTNDLL 476
T N + N N S N S N TS + NNN N +TI ++ T
Sbjct: 165 TSNSNNSTSNSNNSSNNNNSTSNSNNSTSNSNNSTRNNNSSSNNNNSTINNKIVATTTTT 224
Query: 477 ETML 488
T+L
Sbjct: 225 TTVL 228
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +3
Query: 315 NNRNDNISVTVKNDLSQIEN-ITSKLEKTLTNNNVKLYNATNTIADESRKTND 470
NN N+N S + N ++ N TS + NNN N+ N+ ++ + T++
Sbjct: 122 NNSNNNNSTSNSNSSTRNNNNSTSNSNNSTRNNNNSTSNSNNSTSNSNNSTSN 174
>SB_47366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Frame = +3
Query: 327 DNISVTVKNDLSQIENITSKLEKTLTN---NNVKLYNATNTIAD----ESRKTNDLLETM 485
DNI T++N + Q+E L +TL N +N K+ A I + ++D E +
Sbjct: 45 DNIRATIQNHIQQLEEQAEDLTQTLENMYHDNEKVLTAQQEILELDLSNLLSSSDFTENV 104
Query: 486 LR 491
LR
Sbjct: 105 LR 106
>SB_41825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 825
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 4 DNNRISTISAEDFMG-TNLKKLSIGGNPLPCEIIVKF 111
D NRI+ I+A F+G N+K L + + L C+ +K+
Sbjct: 215 DGNRITAIAATAFLGLENIKYLWLNTSQLMCDCKIKW 251
>SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019)
Length = 1136
Score = 28.3 bits (60), Expect = 7.0
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Frame = +3
Query: 216 NRCHG*EDYLRRRNKMLMKIRDILLKFTE-----NLPMNNRNDNISVTVKNDLSQIENIT 380
+RC LRR +++ + K+ E ++ M + T K +LSQ +
Sbjct: 257 SRCSNATAELRRHRQVVESLSSDCEKYKELVMSKDIAMKELEQYLGKTNK-ELSQTKTEV 315
Query: 381 SKLEKTLTNNNVKLYNATNTIADESRKTNDLLETMLR 491
++ E + + V L N T DE+++ D+ E R
Sbjct: 316 AEKEAAIASLRVDLQNKTKLSEDENKRIQDIEEESRR 352
>SB_21459| Best HMM Match : LRR_1 (HMM E-Value=1.8e-11)
Length = 137
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 7 NNRISTISAEDFMGTNLKKLSIGGNPLPCEIIVKFKQNDVPFELTSL 147
NNR++T+ E NL++LS+ NPL +V+F + D+ F+ SL
Sbjct: 55 NNRLTTLPVEIVKLKNLEELSLRDNPL----VVRFVR-DMAFKPPSL 96
>SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083)
Length = 1007
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +3
Query: 249 RRNKMLMKIRDILLKFTENLPMNNRNDNISVTVKNDLSQIENITSKLEKTLT---NNNVK 419
R+ + ++ ++D L T +L +N N S + S++E ++EK T +
Sbjct: 801 RQYQKIVDLKDELKSLTASLEERKQNQNGSEELATCRSELEKAKGEIEKAWTLYDKEKDR 860
Query: 420 LYNATNTIADESRKTNDLLETM 485
L + DE + +L+ M
Sbjct: 861 LEKLNGQLIDELKSLTSVLDEM 882
>SB_36254| Best HMM Match : Filament (HMM E-Value=0.21)
Length = 589
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 237 DYLRRRNKMLMKIRDILLKFTENLPMNNRNDNISVTVKNDLSQIENITSKLEKTLTNNNV 416
D +R +N ML L K E+ + RN +T +ND +++EN K K +++
Sbjct: 236 DQMRSKNNMLETENANLKKRLEDKDQDLRN----ITAENDKNKVENYKLKTAKFSAEDSL 291
Query: 417 K-LYNATNTIADESRKTNDLLE 479
+ + + +D+ K ++L+
Sbjct: 292 REEVGSLKSKSDDLEKEREMLQ 313
>SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 303 NLPMNNRNDNISVTVKNDLSQIENITSKLEKTLTNNNVKLYNAT--NTIADESRKTND 470
N N +DN +++ N+ S N TS KT NNN N T N ++ T+D
Sbjct: 98 NTSDNKNSDNKNISDNNNTSD-NNKTSDNNKTSDNNNTSDNNNTSDNNNTSDNNNTSD 154
>SB_23569| Best HMM Match : PAN (HMM E-Value=0.0015)
Length = 504
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +3
Query: 315 NNRNDNISVTVKNDLSQIENITSKLEKTLTNNNVKLYNATNTIADESRKTNDLLETMLRI 494
NN N+N + T N+ S N + T NNN YN N + R L R
Sbjct: 445 NNNNNNNNNTYNNNNSSNNNNNNN---TYNNNNNNTYNNNNNNYKQQRNLPPPLAAKKRA 501
Query: 495 LSY 503
+ Y
Sbjct: 502 IPY 504
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 539 KGNATYENLVSYVNEIKQNI-EDRWKERQNVLNDLQNDIAQLHSRIEVLAMTEEPRHERL 715
K ++ E VSYV+E+K + E+ K V DL+ ++ S I E PR+ L
Sbjct: 930 KSDSNTEKTVSYVSEVKTELKENTEKIVSEVKGDLKESTIKILSAI-ASQQVESPRYRML 988
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 237 DYLRRRNKMLMKIRDILLKFTENLPMNNRNDNISVTVKNDLSQIENITSKLEKTLTNNNV 416
D +R +N ML L K E+ + RN +T +ND +++EN K K +++
Sbjct: 2764 DQMRSKNNMLETENANLKKRLEDKDQDLRN----ITAENDKNKVENYKLKTAKFSAEDSL 2819
Query: 417 K-LYNATNTIADESRKTNDLLE 479
+ + + +D+ K ++L+
Sbjct: 2820 REEVGSLKSKSDDLEKEREMLQ 2841
>SB_2892| Best HMM Match : RasGAP_C (HMM E-Value=0.83)
Length = 333
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 554 YENLVSYVNEIKQNIEDRWKERQNVLNDLQNDIAQLHSRIEVLAMTEEPR 703
YEN ++ VNE QN D ++ L +++ ++ + R+ +A PR
Sbjct: 167 YENQINEVNEEIQNETDIGLQKSKRLQEMELELREYKQRLSSVAKRVIPR 216
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,009,314
Number of Sequences: 59808
Number of extensions: 370306
Number of successful extensions: 1837
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1739
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -