Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00449
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64601-2|AAQ82847.1| 592|Caenorhabditis elegans Temporarily ass... 31 0.87
U64601-1|AAB04573.2| 564|Caenorhabditis elegans Temporarily ass... 31 0.87
U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical pr... 31 1.2
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 31 1.2
U80024-8|AAK18887.3| 288|Caenorhabditis elegans Serpentine rece... 30 2.0
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 30 2.0
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 29 3.5
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 3.5
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 3.5
AF100663-3|AAC68980.1| 529|Caenorhabditis elegans Udp-glucurono... 29 3.5
AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical ... 29 3.5
AF024490-1|AAB70308.1| 334|Caenorhabditis elegans Hypothetical ... 29 4.7
Z79597-2|CAB01860.2| 611|Caenorhabditis elegans Hypothetical pr... 28 8.1
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 28 8.1
U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set (trithorax/... 28 8.1
AL132860-10|CAB60525.1| 615|Caenorhabditis elegans Hypothetical... 28 8.1
AL132860-9|CAB60524.1| 647|Caenorhabditis elegans Hypothetical ... 28 8.1
AL132841-7|CAB61033.1| 611|Caenorhabditis elegans Hypothetical ... 28 8.1
AF067936-5|AAC19211.1| 430|Caenorhabditis elegans Hypothetical ... 28 8.1
AF067936-4|AAC19210.1| 903|Caenorhabditis elegans Hypothetical ... 28 8.1
>U64601-2|AAQ82847.1| 592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 126, isoform b protein.
Length = 592
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -1
Query: 439 VFVALYNFTLLLVKVFSNLLVMFSI*L-KSFLTVTEIL 329
VF+AL+ L+L+ +F N+LV+ S+ + K T T IL
Sbjct: 100 VFIALFLVMLILLTIFGNILVVLSVVVYKRMRTFTNIL 137
>U64601-1|AAB04573.2| 564|Caenorhabditis elegans Temporarily
assigned gene nameprotein 126, isoform a protein.
Length = 564
Score = 31.1 bits (67), Expect = 0.87
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -1
Query: 439 VFVALYNFTLLLVKVFSNLLVMFSI*L-KSFLTVTEIL 329
VF+AL+ L+L+ +F N+LV+ S+ + K T T IL
Sbjct: 72 VFIALFLVMLILLTIFGNILVVLSVVVYKRMRTFTNIL 109
>U41625-2|ABS19463.1| 584|Caenorhabditis elegans Hypothetical
protein K03A1.2b protein.
Length = 584
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 7 NNRISTISAEDFMGTNLKKLSIGGNPLPCEIIVKF 111
N+ ISTIS NLK +GGNP C +F
Sbjct: 439 NSNISTISEHMVDYDNLKTFQVGGNPWNCNCDTQF 473
>U41625-1|AAA83325.2| 586|Caenorhabditis elegans Hypothetical
protein K03A1.2a protein.
Length = 586
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 7 NNRISTISAEDFMGTNLKKLSIGGNPLPCEIIVKF 111
N+ ISTIS NLK +GGNP C +F
Sbjct: 439 NSNISTISEHMVDYDNLKTFQVGGNPWNCNCDTQF 473
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical protein
C56E6.6 protein.
Length = 1102
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 46 GTNLKKLSIGGNPLPCEIIVKFKQNDVPFELTSLRIDEHSAENFEGIAC 192
GT L L + NP+ C+ +FK D +T D H + +F+ + C
Sbjct: 995 GTILHSLELKNNPIKCDC--QFKWMDDFIRVTKFLSDHHISHDFDKVEC 1041
>U80024-8|AAK18887.3| 288|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 9 protein.
Length = 288
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 207 TSIDITCDTFEIFSTVFIYSQRSQFKRNIILFEFYDNF 94
TSI + C F IF ++ Q + ++ +ILF FY F
Sbjct: 18 TSIGVICSVFTIFMNIYFIKQIGRTRQKMILF-FYRLF 54
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 557 ENLVSYVNEIKQNIEDRWKERQNVLN 634
EN + VNE ++ +ED W R+N+L+
Sbjct: 1376 ENRLQGVNEARKGLEDAWVARRNILD 1401
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +2
Query: 476 RDNVENFILSTKIITTNPTIVKGNATYENLVSYVNEIKQNIEDRWKERQNVLN---DLQN 646
R N EN L+ ++ I N + ++ K+ E+ +ERQN+ N +L
Sbjct: 1295 RLNSENSDLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLAR 1354
Query: 647 DIAQLHSRIEVLAMTEEPRHERLSKA 724
++ QL IE + +LSKA
Sbjct: 1355 ELEQLKESIEDEVAGKNEASRQLSKA 1380
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +2
Query: 476 RDNVENFILSTKIITTNPTIVKGNATYENLVSYVNEIKQNIEDRWKERQNVLN---DLQN 646
R N EN L+ ++ I N + ++ K+ E+ +ERQN+ N +L
Sbjct: 1295 RLNSENSDLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLAR 1354
Query: 647 DIAQLHSRIEVLAMTEEPRHERLSKA 724
++ QL IE + +LSKA
Sbjct: 1355 ELEQLKESIEDEVAGKNEASRQLSKA 1380
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 593 NIEDRWKERQNVLN-DLQNDIAQLHSRIEVLAMTEEPRHERL 715
NI+ + NV+N +LQ ++ QLHS IEV+ + RL
Sbjct: 215 NIQTDKDDHVNVVNANLQIEVDQLHSEIEVIGKKKSDLENRL 256
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 593 NIEDRWKERQNVLN-DLQNDIAQLHSRIEVLAMTEEPRHERL 715
NI+ + NV+N +LQ ++ QLHS IEV+ + RL
Sbjct: 215 NIQTDKDDHVNVVNANLQIEVDQLHSEIEVIGKKKSDLENRL 256
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Frame = +2
Query: 476 RDNVENFILSTKIITTNPTIVKGNATYENLVSYVNEIKQNIEDRWKERQNVLN---DLQN 646
R N EN L+ ++ I N + ++ K+ E+ +ERQN+ N +L
Sbjct: 1295 RLNSENSDLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLAR 1354
Query: 647 DIAQLHSRIEVLAMTEEPRHERLSKA 724
++ QL IE + +LSKA
Sbjct: 1355 ELEQLKESIEDEVAGKNEASRQLSKA 1380
>AF100663-3|AAC68980.1| 529|Caenorhabditis elegans
Udp-glucuronosyltransferase protein20 protein.
Length = 529
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 297 TENLPMNNRNDNISVTVKNDLSQIENITSKLEKTLTNNNVK 419
+ N M R+ +V VKNDLS + + +EK + N+ +
Sbjct: 396 SRNAQMLKRHGGAAVLVKNDLSNPKLVQETIEKVINNSEYR 436
>AC006761-8|AAF60552.2| 524|Caenorhabditis elegans Hypothetical
protein Y41G9A.6 protein.
Length = 524
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 297 TENLPMNNRNDNI--SVTVKNDLSQIENITSKLEKTLTNNNVKLYNA 431
T+NL N+ +TV N L+Q + S L +T NN +NA
Sbjct: 386 TQNLSQNSYGKGFLAGITVVNSLTQHQRFASTLPQTSAKNNNNTWNA 432
>AF024490-1|AAB70308.1| 334|Caenorhabditis elegans Hypothetical
protein C02H6.1 protein.
Length = 334
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 491 NFILSTKIITTNPTIVKGNATYENLVSYVNEIKQNIED 604
NF++ + T P I+ Y +L VN++ Q IED
Sbjct: 37 NFLIPADLYTHFPAIIHPYREYYSLTRNVNKLTQGIED 74
>Z79597-2|CAB01860.2| 611|Caenorhabditis elegans Hypothetical
protein C33A11.1 protein.
Length = 611
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 339 VTVKNDLSQIENITSKLEKTLTNNNVKLYNATNTIAD 449
V NDL +I + L KT+ N+ ++N +N +
Sbjct: 383 VAAHNDLGKIYALCETLRKTMNENDDNVFNVSNNFGE 419
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily assigned
gene nameprotein 278 protein.
Length = 1130
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 563 LVSYVNEIKQNIEDRW---KERQNVLNDLQNDIAQLHSRIEVLAMTEEPRHERLSK 721
+V + N I++ I+++ E L +N+IA+LH + + E R+E SK
Sbjct: 866 VVLFDNSIQEKIDEKEATINEMNERLKSRENEIAKLHEEMYMQKTQNEKRNEEQSK 921
>U37430-5|AAB52674.2| 389|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 12
protein.
Length = 389
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +3
Query: 297 TENLPMNNRNDNISVTVKNDLSQIENITSKLEKTLTN--NNV--KLYNATNTIADESRKT 464
T +P+ + S +N+ EN+ E+ +TN NN+ K Y+ N + DE R
Sbjct: 299 TAPVPLATKTKRHSPPAENESEDKENVKPPSEEDITNAMNNLLNKTYDNQNGVLDECRSI 358
Query: 465 NDLLE 479
LE
Sbjct: 359 MGNLE 363
>AL132860-10|CAB60525.1| 615|Caenorhabditis elegans Hypothetical
protein Y56A3A.12b protein.
Length = 615
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 515 ITTNPTIVKGNATYENLVSYVNEI 586
+ NP IVKGN T E + + NEI
Sbjct: 35 LVNNPRIVKGNETAEQIETTFNEI 58
>AL132860-9|CAB60524.1| 647|Caenorhabditis elegans Hypothetical
protein Y56A3A.12a protein.
Length = 647
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 515 ITTNPTIVKGNATYENLVSYVNEI 586
+ NP IVKGN T E + + NEI
Sbjct: 67 LVNNPRIVKGNETAEQIETTFNEI 90
>AL132841-7|CAB61033.1| 611|Caenorhabditis elegans Hypothetical
protein C33A11.1 protein.
Length = 611
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 339 VTVKNDLSQIENITSKLEKTLTNNNVKLYNATNTIAD 449
V NDL +I + L KT+ N+ ++N +N +
Sbjct: 383 VAAHNDLGKIYALCETLRKTMNENDDNVFNVSNNFGE 419
>AF067936-5|AAC19211.1| 430|Caenorhabditis elegans Hypothetical
protein C24G6.2b protein.
Length = 430
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 240 YLRRRNKMLMKIRDILLKFTENLPMNNRNDNISVTVKNDLSQIENITSKLE 392
+LR R K +MK+ D+ + + + N + N+ VT+K L I+ LE
Sbjct: 176 FLRERCKYMMKLDDLGINYHDPPENENYDTNMIVTLKQLLQFAVQISYGLE 226
>AF067936-4|AAC19210.1| 903|Caenorhabditis elegans Hypothetical
protein C24G6.2a protein.
Length = 903
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 240 YLRRRNKMLMKIRDILLKFTENLPMNNRNDNISVTVKNDLSQIENITSKLE 392
+LR R K +MK+ D+ + + + N + N+ VT+K L I+ LE
Sbjct: 649 FLRERCKYMMKLDDLGINYHDPPENENYDTNMIVTLKQLLQFAVQISYGLE 699
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,451,055
Number of Sequences: 27780
Number of extensions: 307038
Number of successful extensions: 1064
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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