Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00448
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       25   0.48 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.84 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.84 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.6  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   3.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = -3

Query: 202 PQAQWSHRHLLNYCQANHR*YRQPGYPGYRLEATLPRHRENRCE 71
           P     H H +N     HR   QPG+ G      +   + N CE
Sbjct: 35  PSICGEHGHCVNLPGVGHRCQCQPGFTGKYCHENINDCKVNPCE 78


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -2

Query: 344 SFIYVHFIFSICITLFNY 291
           +F++V   FSICIT F Y
Sbjct: 236 NFLFVLSTFSICITQFYY 253


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 341 FIYVHFIFSICITLFNYRMLFL 276
           F  +H +F +C+  F   +LFL
Sbjct: 188 FFNMHLLFLLCLDYFTLHLLFL 209



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 341 FIYVHFIFSICITLFNYRMLFL 276
           F Y+H +F     +F   +LFL
Sbjct: 261 FYYMHLLFCCAFIIFTMHLLFL 282


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -3

Query: 622 IFIHCT*FIILNAWCSFNFTYTTIC 548
           IFI C  F ++  W SF   +   C
Sbjct: 132 IFITCELFFVILLWISFFLNFMLHC 156


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/53 (22%), Positives = 21/53 (39%)
 Frame = +3

Query: 285 HPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQD 443
           +P V+  +          +  +G  N +++ + D   S  A   ENS   D D
Sbjct: 63  NPAVQGSSLTEGKRSKRSKRPNGDTNGDTSQVDDQNESLEASVNENSKNGDDD 115



 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +2

Query: 563 GEVEGAPSVQDDESSTMDEDIAEGGVASSDD 655
           G+  G  S  DD++ +++  + E      DD
Sbjct: 85  GDTNGDTSQVDDQNESLEASVNENSKNGDDD 115


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 670  LNVVDIITAGNPSFSYIFIHCT 605
            +NVVDI+T   P+ S   +  T
Sbjct: 1334 VNVVDIVTTAKPAQSTTSVSTT 1355


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,043
Number of Sequences: 336
Number of extensions: 2780
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)