Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00448
(738 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 33 0.056
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 32 0.098
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 32 0.098
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 31 0.23
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 30 0.30
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.69
SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual 28 1.2
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 27 2.1
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 27 2.1
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 27 2.1
SPAPB2B4.07 |||ubiquitin family protein, human UBTD1 homolog|Sch... 27 3.7
SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomy... 26 6.4
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 26 6.4
SPAC26F1.09 |gyp51||GTPase activating protein Gyp51 |Schizosacch... 26 6.4
SPAC664.08c |||traub transciption factor family protein |Schizos... 26 6.4
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 6.4
SPAC22E12.13c |rpl2403|rpl24-3|60S ribosomal protein L24-3 |Schi... 25 8.5
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 25 8.5
SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr... 25 8.5
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 25 8.5
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 25 8.5
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 25 8.5
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 32.7 bits (71), Expect = 0.056
Identities = 26/90 (28%), Positives = 35/90 (38%)
Frame = +3
Query: 243 FGRRPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEEN 422
F P + P A EE E+ AD E E + DE G EE GD D E
Sbjct: 164 FDDAPPVQPDADEEE---EEEEAD-EMEEEFDEEGEGDEEEEEEDDGDGDGEGDGDGEGE 219
Query: 423 SPQNDQDNQLDSMIKEPESEEAEGLGDAES 512
+ + + + I E EE L +A +
Sbjct: 220 NDGKGSEEEEEEEIDIEEEEEESALANASA 249
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 31.9 bits (69), Expect = 0.098
Identities = 18/76 (23%), Positives = 39/76 (51%)
Frame = +3
Query: 273 AQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQL 452
A E + +++ E+E + +E + + ES ++ +++EE S ++++
Sbjct: 76 AASEDSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDESERSGP- 134
Query: 453 DSMIKEPESEEAEGLG 500
S +K+PE EEA+ G
Sbjct: 135 SSFLKKPEKEEAKPAG 150
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 31.9 bits (69), Expect = 0.098
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +3
Query: 264 APPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQD 443
APP + G+ + DE D + S + +E++ + S+ +D+E S D D
Sbjct: 91 APPEKAHSSSEASGSGSSSDESDSSSSESESSSEDN-----DSSSSSSDSESESSSEDSD 145
Query: 444 NQLDSMIKEPESEEAEGLGDAES 512
+ S E ES +EG + S
Sbjct: 146 SSSSSSDSESES-SSEGSDSSSS 167
Score = 29.1 bits (62), Expect = 0.69
Identities = 14/69 (20%), Positives = 33/69 (47%)
Frame = +3
Query: 306 NADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEE 485
++++E + +++S + + ES + S+ + + S + +DN S + ESE
Sbjct: 134 DSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESES 193
Query: 486 AEGLGDAES 512
+ D+ S
Sbjct: 194 SSEDSDSSS 202
Score = 29.1 bits (62), Expect = 0.69
Identities = 14/69 (20%), Positives = 33/69 (47%)
Frame = +3
Query: 306 NADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEE 485
++++E + +++S + + ES + S+ + + S + +DN S + ESE
Sbjct: 188 DSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESES 247
Query: 486 AEGLGDAES 512
+ D+ S
Sbjct: 248 SSEDSDSSS 256
Score = 28.7 bits (61), Expect = 0.91
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +3
Query: 300 QGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPES 479
+ + +ED D ++S + +E S+ D+ S+ +D+E S D D+ +S E +S
Sbjct: 226 ESESSSEDN-DSSSSSSDSESESSSEDSDSS-SSSSDSESESSSKDSDSSSNSSDSEDDS 283
Query: 480 EEAEGLGDAES 512
++ES
Sbjct: 284 SSDSSDSESES 294
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 309 ADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEA 488
+++ E ++S + ES+ ++ S+ +D+E S D D+ S E ES +
Sbjct: 155 SESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESES-SS 213
Query: 489 EGLGDAES 512
EG + S
Sbjct: 214 EGSDSSSS 221
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = +3
Query: 309 ADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEEA 488
+++ E ++S + ES+ ++ S+ +D+E S D D+ S E ES
Sbjct: 209 SESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSK 268
Query: 489 EGLGDAES 512
+ + S
Sbjct: 269 DSDSSSNS 276
Score = 26.2 bits (55), Expect = 4.9
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +3
Query: 306 NADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPESEE 485
++D+E E ++ S + + +S D+ S +D+E S D D+ S + S
Sbjct: 258 SSDSESESSSKDSDSSSNSSDSE---DDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSS 314
Query: 486 AEGLGDAES 512
+G + ++
Sbjct: 315 EDGNSNTDT 323
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 30.7 bits (66), Expect = 0.23
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 297 EQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPE 476
EQ + + EDE DID+T ++ N + + EE+ D+D +L+ KE E
Sbjct: 230 EQLSTENEDEFDIDDT-----TDKMTTFTMNKFADLSVLEEDDDDEDEDEELEGE-KEEE 283
Query: 477 SEEAE 491
EE E
Sbjct: 284 EEEKE 288
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 30.3 bits (65), Expect = 0.30
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +3
Query: 270 PAQEEHPVVEQGNADAEDE-MDIDETASGAM--NEESAYIGDNCLSTPADTEENSPQ--- 431
P++EE EQ N D++DE + ID +GA+ NE+ + ++ D E P
Sbjct: 154 PSEEELQEPEQENIDSDDEDLAIDGFGAGAIAENEDESSQDESESEEEDDITEPVPSFAN 213
Query: 432 -NDQDNQLDSMIKEPESEEAE 491
+ QD DS +SEE E
Sbjct: 214 ISTQDFNSDSAAGSSDSEEDE 234
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 29.1 bits (62), Expect = 0.69
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +3
Query: 231 QQRCFGRRPSIAPPAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPAD 410
+Q C ++ + +E E+G+AD EDE D D S + + C STP
Sbjct: 217 KQSCSSESDRVSQISDDEED--EEGSADEEDEEDSDVELSESSLSDDEDSPLRCPSTPVQ 274
Query: 411 T 413
T
Sbjct: 275 T 275
>SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 296
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 324 EMDIDETASGAMNEESAYIGDNCLSTPADTEENS 425
EMD+ +G + EES DN + P DT++N+
Sbjct: 35 EMDVQSLLTGEL-EESYTKADNSIVVPTDTQKNT 67
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 27.5 bits (58), Expect = 2.1
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
Frame = +3
Query: 285 HPVVEQGNADAEDEMDIDETASG----AMNEESAYIGDNCLSTPADTEENSPQN-DQDNQ 449
HP E NA+ + +DE A A N + N +T E P+N D +
Sbjct: 198 HPSEELNNANTDGRTGVDEPARQLHRIAFNRIRFILAPNRSATNTPVENTHPENPDSNTS 257
Query: 450 LDSMIKEPESEEAEGLGDAES 512
+ EP + E + DAE+
Sbjct: 258 TPTTRSEPLAGEGASI-DAEN 277
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 27.5 bits (58), Expect = 2.1
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 58 SDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEE 204
SD + + S D ++ + Q D+ + D DD +NN DD ++ E
Sbjct: 194 SDSSNYHTSTDSSQYNDQDDHVYDDTNDGTDDDINNNEYKDDESSSGSE 242
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 27.5 bits (58), Expect = 2.1
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 273 AQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIG-DNCLSTPADTEENSPQNDQDNQ 449
AQ E P VE +AEDEM + + S A NEE + D +S P ++ + + +
Sbjct: 863 AQREVPDVEDA-IEAEDEMLEEASDSEAANEEDIDLSKDKFISVPKKPKKRTKAKAEASS 921
Query: 450 LDSMIKEPESEEA 488
S + + A
Sbjct: 922 SSSTSRRSRKKTA 934
>SPAPB2B4.07 |||ubiquitin family protein, human UBTD1
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 239
Score = 26.6 bits (56), Expect = 3.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 139 DTIDDLPDNNSASDDVTTEPEE 204
D++DD DN +S+D T PEE
Sbjct: 129 DSLDDEDDNMISSNDPTKSPEE 150
>SPBC2A9.07c |||zf-PARP-type zinc finger protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 297 EQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTE 416
EQG+ D EDE + AS A E+ I + L++ + E
Sbjct: 111 EQGHVDEEDEERCRKMASDASEEKDRKIEEGELTSEEEKE 150
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/63 (19%), Positives = 32/63 (50%)
Frame = +3
Query: 300 QGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQLDSMIKEPES 479
+ + D+E E DE++ + E+ ++ + + + ++ Q++ L+ + K+P+
Sbjct: 76 ESHVDSEIETSKDESSVNKVEEKVEEFKEDNVEQEIKQKRSLSESPQESMLEKVSKKPKV 135
Query: 480 EEA 488
EA
Sbjct: 136 SEA 138
>SPAC26F1.09 |gyp51||GTPase activating protein Gyp51
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1031
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/52 (26%), Positives = 21/52 (40%)
Frame = +2
Query: 509 ESPDQSISSAILPTDSGVGEVEGAPSVQDDESSTMDEDIAEGGVASSDDVND 664
E P ++ + VGE G PS D D+ E G + +D+ D
Sbjct: 148 EEPVNEVNETATLGNEDVGERSGFPSEGLDNEPESQRDLDETGNLAPEDLKD 199
>SPAC664.08c |||traub transciption factor family protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 6.4
Identities = 25/134 (18%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Frame = +3
Query: 270 PAQEEHPVVEQGNADAEDEMDIDETASGAMNEESAYIGDNCLSTPADTEENSPQNDQDNQ 449
P++EE ++ +A +ED + + + +++EE+ + D + + + +
Sbjct: 92 PSEEEDSEEDENDAVSEDHENFSSSEASSISEENEDDDQSSAIPEKDMDRLKKIINGEKK 151
Query: 450 LDSMIKEPESEEAEGLGDAESLLISLSVLPFYQQIV-V*VKLKE--HQAFKMMNQVQWMK 620
L I+ L D + L + FY ++ ++L++ Q NQ+Q K
Sbjct: 152 LSDQIR------TSALEDMKKGLALKEQMRFYDNVLDTRIRLQKGCSQLLSSSNQLQGDK 205
Query: 621 I*LKEGLPAVMMST 662
+ ++GL + + T
Sbjct: 206 VEARDGLVSFIQHT 219
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 333 IDETASGAMNEESAYIGDNCLSTPADTEENSP--QNDQDNQLDSMIKEPE 476
+D+T+ +NEESAY+ + EE +P + + +L+++++E E
Sbjct: 1051 LDQTSQ--LNEESAYLEKRIQTLERSLEEVTPIWKKQWERELNAIVQEQE 1098
>SPAC22E12.13c |rpl2403|rpl24-3|60S ribosomal protein L24-3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 25.4 bits (53), Expect = 8.5
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
Frame = +2
Query: 563 GEVEGA----PSVQDDESSTMDEDIAE 631
GEVE A P + DE TM+E++AE
Sbjct: 140 GEVETAEVQEPQIVSDEEYTMEEEVAE 166
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 49 KMESDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPE 201
K+ES + A++ DNQD + ++ + NNSA D +P+
Sbjct: 55 KLESSVGEQESATKRAKIENLKDNQDLIPNNDVNGIHINNSAVADTKHKPK 105
>SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 178
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 46 TKMESDPAT-HSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEPEELAA 213
TK E A + ++ + E+SP DNQ+ T L +N ++ ++ E +++
Sbjct: 63 TKKELKKAKMNGNAVNSKELSPNTDNQNTPAGPTKHSLDENEKDKENKKSKKETVSS 119
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 25.4 bits (53), Expect = 8.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 94 AEVSPQADNQDNQVADTIDDLPDNNSASDDVTTEP 198
A SPQ N D+Q A T +D N +T P
Sbjct: 334 ASYSPQNSNFDHQAAATTNDAHQNVVRGSAITIAP 368
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +1
Query: 55 ESDPATHSDSHDGAEVSPQADNQDNQVADTIDDLPDNNSASDDV 186
E + T ++ + E+S Q ++N +A+ DD + DD+
Sbjct: 134 EQEEKTDNEDDNDVEISTQESLENNGLAEKKDDTSSLATLEDDI 177
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 639 LPAVMMSTTFSSAAQEILSTGISSSTAEPGS 731
+PA +S SAAQ I S I S A P S
Sbjct: 834 VPATPLSAALGSAAQSITSPLIMSPAAIPAS 864
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,607,712
Number of Sequences: 5004
Number of extensions: 47152
Number of successful extensions: 222
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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