Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00446X
(331 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 128 2e-31
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 126 7e-31
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 89 2e-19
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 62 2e-11
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 58 5e-10
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 32 0.020
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 31 0.034
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 31 0.060
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.18
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 28 0.32
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 27 0.56
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 0.56
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 27 0.97
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 27 0.97
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 27 0.97
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 26 1.3
SPAC22G7.03 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 1.3
SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|ch... 26 1.7
SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|ch... 26 1.7
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 26 1.7
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 2.2
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 2.2
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 25 2.2
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 25 2.2
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 2.2
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 25 3.0
SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor Fep1|Sc... 25 3.0
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 25 3.9
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 25 3.9
SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1 |S... 25 3.9
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 25 3.9
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 24 5.2
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 24 5.2
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 24 5.2
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 24 5.2
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 24 5.2
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 24 6.8
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 24 6.8
SPBC19C7.08c |||leucine carboxyl methyltransferase|Schizosacchar... 24 6.8
SPBC16D10.02 |trm11||tRNA |Schizosaccharomyces pombe|chr 2|||Manual 24 6.8
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 24 6.8
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 24 6.8
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 23 9.0
SPAC22A12.14c |||BSD domain protein, unknown biological role|Sch... 23 9.0
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 23 9.0
SPAC26H5.04 |||vacuolar import and degradation protein Vid28|Sch... 23 9.0
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 23 9.0
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 23 9.0
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 128 bits (310), Expect = 2e-31
Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 NVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYC 181
NVSA+EK T K KITITNDKGRLSKEEI+RMV+EAEKY+ ED+ + IQAKN LESY
Sbjct: 485 NVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYA 544
Query: 182 FSMTSTMEDEKLKEKISEL*QADHLDKC-NDTIKWLDSNQLADKEEYEHKQ 331
+S+ ++++D LK+K+ + + +DK +TI+WLD N A K+EYE KQ
Sbjct: 545 YSLRNSLDDPNLKDKV-DASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQ 594
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 126 bits (305), Expect = 7e-31
Identities = 63/111 (56%), Positives = 83/111 (74%), Gaps = 1/111 (0%)
Frame = +2
Query: 2 NVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYC 181
NVSA+EK T K KITITNDKGRLSKEEI+RMV EAEKY+ ED+ + IQAKN LESY
Sbjct: 485 NVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYA 544
Query: 182 FSMTSTMEDEKLKEKISEL*QADHLDKC-NDTIKWLDSNQLADKEEYEHKQ 331
+S+ ++++D LK+K+ + + +DK +TI+WLDSN A K+E+E KQ
Sbjct: 545 YSLRNSLDDPNLKDKV-DASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQ 594
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 89.0 bits (211), Expect = 2e-19
Identities = 49/112 (43%), Positives = 71/112 (63%), Gaps = 3/112 (2%)
Frame = +2
Query: 5 VSAIEKS-TNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYC 181
VSA++KS K K+ I NDKGRLS+E+IERMV EAE++ ED KE I+A+N LE+Y
Sbjct: 515 VSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAEEDKILKERIEARNTLENYA 574
Query: 182 FSMTSTM-EDEKLKEKISEL*QADHLDKCNDTIKWLD-SNQLADKEEYEHKQ 331
+S+ +DE+L K+ + LD D +WL+ + A KEE+E ++
Sbjct: 575 YSLKGQFDDDEQLGGKVDPEDKQAVLDAVEDVAEWLEIHGEDASKEEFEDQR 626
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 62.1 bits (144), Expect = 2e-11
Identities = 33/73 (45%), Positives = 45/73 (61%)
Frame = +2
Query: 2 NVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYC 181
NVSA +K+TNK++ IT+ G L+ EIE MV +AEKYR D +KE I+ N ES C
Sbjct: 528 NVSARDKATNKDSSITVAGSSG-LTDSEIEAMVADAEKYRASDMARKEAIENGNRAESVC 586
Query: 182 FSMTSTMEDEKLK 220
+ S ++ K K
Sbjct: 587 TDIESNLDIHKDK 599
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 57.6 bits (133), Expect = 5e-10
Identities = 25/75 (33%), Positives = 47/75 (62%)
Frame = +2
Query: 5 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCF 184
V+A+EK+T + I ITN G LS +I+ M+ A+K++ +D + ++AK+ LESY
Sbjct: 491 VTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYIS 550
Query: 185 SMTSTMEDEKLKEKI 229
++ +T+ + + K+
Sbjct: 551 NIETTISEPNVMMKL 565
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 32.3 bits (70), Expect = 0.020
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +2
Query: 29 NKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMTSTMED 208
NK+ K T D SKEE+E +V E E D +Q + K+ L++ F ++
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE----NDSEQLDHFDMKSILKAEKFK-----KN 579
Query: 209 EKLKEKISEL 238
KLK+K S L
Sbjct: 580 RKLKKKASNL 589
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 31.5 bits (68), Expect = 0.034
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 20 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQ-KETIQAKNALESYCFSMTS 196
K K ++++ + RL E +E+ EAE DK ET+ KNALE Y + +
Sbjct: 534 KKLVKVADLSVSVQEDRLPTEVLEKY-REAEHQMIATDKLVAETVDRKNALEEYIYDTRA 592
Query: 197 TMED 208
++D
Sbjct: 593 KLDD 596
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 30.7 bits (66), Expect = 0.060
Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
Frame = +2
Query: 14 IEKSTNKENKITITNDKGRLSK-EEIERMVNEAEKYRNEDDKQKETIQAKNAL------E 172
IE EN++ I N L K +++ R ++ +N+++ +++ A + L
Sbjct: 793 IEHCKLSENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAA 852
Query: 173 SYCFSMTSTMEDEKLKEKISEL*QADHLDKCNDTIKWLDSNQLADKE 313
++ +DEKLK+ ++ Q + N+ + D ++D E
Sbjct: 853 NHALLFRKFYDDEKLKQMAKDIMQEEQYKNANEQYIYEDMEVMSDFE 899
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.18
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 62 KGRLSKEEIERMVNEAEKYRNEDD 133
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 28.3 bits (60), Expect = 0.32
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 2 NVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE--TIQAKNA 166
NVS + S +E +T ++ R+ +EE +RM ++ E K+K T+Q +A
Sbjct: 64 NVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKRVTTVQGLDA 120
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.5 bits (58), Expect = 0.56
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 5 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 130
VS ++S K + + K EE+E VNE E++R D
Sbjct: 259 VSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.5 bits (58), Expect = 0.56
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +2
Query: 62 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMTSTMEDEKLKEKISEL* 241
+GR + + N+ E + DDKQ + KN+LE+ M + E K +
Sbjct: 1259 RGRQKTSIVAKYRNKRELPEDSDDKQDTASKDKNSLETIDEKMEDASKIEG-DAKTGDDN 1317
Query: 242 QADHLDKCNDTIK 280
+ + LDK D K
Sbjct: 1318 EMEDLDKMEDLEK 1330
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 26.6 bits (56), Expect = 0.97
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +2
Query: 5 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA 166
V A+ KS +++ ++ G + EEI ++++ E E+D++ E N+
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELEKAMGVNS 650
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 26.6 bits (56), Expect = 0.97
Identities = 22/92 (23%), Positives = 42/92 (45%)
Frame = +2
Query: 35 ENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMTSTMEDEK 214
E K+ +D G + + ++N++ K N+ K+ + + + +Y +
Sbjct: 222 EKKVKKRSDLGNKYESTLNSLINKSVKKHNKLVKKHKPLPSTLDYTAY----VKKRPTHR 277
Query: 215 LKEKISEL*QADHLDKCNDTIKWLDSNQLADK 310
LK I + + D +D C DTI LD ++ DK
Sbjct: 278 LKFLIGK--KVDTIDYCRDTIAELD--EVVDK 305
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 26.6 bits (56), Expect = 0.97
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 74 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMTSTMEDEKLKE 223
+KEE+E +NE + E ++Q + ++N ++ M +EKLKE
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDN-IDDMIKQQVEEKLKE 1654
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.2 bits (55), Expect = 1.3
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 98 VNEAEKYRNEDDKQKETIQAKNALESYC---FSMTSTMEDEKLKEKISEL*QA-DHLDKC 265
+NE + Y + + Q +T + L S C S + + L++ +L +A H
Sbjct: 830 INETDNYDDNETTQSDTATSYEQLASVCVNELSGKNVLFFYFLEDDSEKLLKACQHFICV 889
Query: 266 NDTIKWLDSNQLADK 310
D+IK L N+ DK
Sbjct: 890 KDSIKRLGDNKFEDK 904
>SPAC22G7.03 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 236
Score = 26.2 bits (55), Expect = 1.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 228 SLNSDKQTISTSATTPSSGWIPTSWPTRR 314
S+N D Q + S T + WIPT W ++R
Sbjct: 171 SINEDTQR-TVSLETIYATWIPTFWESKR 198
>SPBC20F10.07 |||GRAM domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 764
Score = 25.8 bits (54), Expect = 1.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 62 KGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALE 172
+G L E E NEA++ NE+ E +N E
Sbjct: 89 EGELKLENFENQENEADEAENEETSYSEQNHTENTEE 125
>SPBC146.06c |||human MTMR15 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 703
Score = 25.8 bits (54), Expect = 1.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 23 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK--ETIQAKNALESYCF 184
+TNK N + N L EEI V + E + DD+ + E +A ++ E Y F
Sbjct: 46 NTNKHNVYSTKNSMYLLGFEEILNTVLDCEPHIFTDDELRVIENFKALDSDERYLF 101
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 25.8 bits (54), Expect = 1.7
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 74 SKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYC 181
S+ E +++ E ++ ED+KQ E + K AL+ +C
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFC 334
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 2.2
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 23 STNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMTSTM 202
ST+ + + DK + E+I + ++Y NED+ + +++ A S+ ++T+T+
Sbjct: 387 STSLPSTEPVEVDKQYMESEKIPTIDEYLQEYSNEDEIVLQVLESFPAAVSFS-TITNTI 445
Query: 203 EDEKLKEKI 229
+ + KI
Sbjct: 446 QAKYSNRKI 454
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 25.4 bits (53), Expect = 2.2
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 9/60 (15%)
Frame = +2
Query: 77 KEEIERMVNEAEKYRNEDD---------KQKETIQAKNALESYCFSMTSTMEDEKLKEKI 229
KE ER+ E + NED K+K IQ KN+ + + TST E K+ I
Sbjct: 487 KETPERLCTENQSTENEDQANLKESELPKEKSDIQPKNSRSTIEYIETSTRVYEMPKDTI 546
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 25.4 bits (53), Expect = 2.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 198 PWRMRSSRKRSLNSDKQTISTSATTPSSGWIPTS 299
P+ S S TISTS++TP + +PTS
Sbjct: 73 PYTGSKSLSSSSILSNSTISTSSSTPITASVPTS 106
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 25.4 bits (53), Expect = 2.2
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 56 NDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNA-LESYCFSMTSTMEDEKLKEKIS 232
+DK + E + E YRNE +E++ +N L S ++ +E+ K ++++S
Sbjct: 635 DDKMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDLLSEMEAIRKELENSKYQQQLS 694
Query: 233 EL*QADHLDKCNDTIK 280
D L N+ ++
Sbjct: 695 ----TDRLTNANNDVE 706
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 2.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 20 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 148
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 25.0 bits (52), Expect = 3.0
Identities = 18/79 (22%), Positives = 35/79 (44%)
Frame = +2
Query: 44 ITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMTSTMEDEKLKE 223
I +T + R S E V + E ++D + +++NA + S + + +KE
Sbjct: 240 IRLTRSRARSSNEA--SYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKE 297
Query: 224 KISEL*QADHLDKCNDTIK 280
K S++ + DK + K
Sbjct: 298 KQSKIEKYMKSDKSSKNFK 316
>SPAC23E2.01 |fep1|gaf2|iron-sensing transcription factor
Fep1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 564
Score = 25.0 bits (52), Expect = 3.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 213 SSRKRSLNSDKQTISTSATTPSSGWIPTSWPTRRS 317
++R RSLN+ K + +P+ +P+S T+ S
Sbjct: 92 NNRIRSLNASKSQSGRKSLSPNPSSVPSSTETKAS 126
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 24.6 bits (51), Expect = 3.9
Identities = 11/48 (22%), Positives = 26/48 (54%)
Frame = +2
Query: 80 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMTSTMEDEKLKE 223
+++E+M +K ++E+ ++ ETI + ++E+E +KE
Sbjct: 491 QKLEKMGGWMKKLQDENSEKTETIAQLEQIIEELHEELRSLEEESIKE 538
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 24.6 bits (51), Expect = 3.9
Identities = 21/84 (25%), Positives = 38/84 (45%)
Frame = +2
Query: 80 EEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFSMTSTMEDEKLKEKISEL*QADHLD 259
EE E V E +E ++K + S S ++ +KL EKI++ + +H
Sbjct: 147 EEDEDRVCEDASSSDEAKREKRKKHSSKKKSKKKTSTGSALDPKKL-EKITKKKKKEHKK 205
Query: 260 KCNDTIKWLDSNQLADKEEYEHKQ 331
K ++ + +DKEE + K+
Sbjct: 206 KDKESSSKKRKSGSSDKEEKKKKK 229
>SPBC28F2.10c |kap1||chromatin remodeling complex subunit Ngg1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 24.6 bits (51), Expect = 3.9
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +2
Query: 8 SAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCFS 187
S +EK +K+ K++ +++ +S E +E + NE + D+Q + KNA + S
Sbjct: 124 SMLEK-VSKKPKVSEAHNE-EISPENVETIENELDLPVKGKDEQTTGLVYKNANDLLTGS 181
Query: 188 MTSTMEDE 211
+ S + D+
Sbjct: 182 LLSFIVDD 189
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 24.6 bits (51), Expect = 3.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 95 MVNEAEKYRNEDDKQKETIQAKNALESYCFSMTST 199
M+++ RN+ +KQ TI KNA++ Y S+ T
Sbjct: 247 MLSKLVSSRNKPNKQ--TILTKNAIQDYLVSLKIT 279
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 24.2 bits (50), Expect = 5.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 158 KNALESYCFSMTSTMEDEKLKEKISEL 238
KN+L S C + ST DE+L +S L
Sbjct: 1049 KNSLLSLCEGLHSTYTDEELNLLLSNL 1075
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 24.2 bits (50), Expect = 5.2
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 213 SSRKRSLNSDKQTISTSATTPSSGWIPTSWPTRRSMST 326
SS S S TIS+S+++PSS ++ + +S S+
Sbjct: 330 SSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSS 367
Score = 23.4 bits (48), Expect = 9.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 213 SSRKRSLNSDKQTISTSATTPSSGWIPTSWPTRRSMSTS 329
SS S +S T ST +++ SS PTS + S S+S
Sbjct: 274 SSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSS 312
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 24.2 bits (50), Expect = 5.2
Identities = 19/75 (25%), Positives = 34/75 (45%)
Frame = +3
Query: 81 KRSSVWLMRQRSTETRMTSKRRPSRPRMHWNLTASA*RLPWRMRSSRKRSLNSDKQTIST 260
K SSV +++ ++ + ++ + +WN T+S + +S S NS T
Sbjct: 327 KSSSVVIVQSETSCSINSASMSSNTTYFYWNSTSSLSSSVFTNTTSSSNSTNSSIPTTYP 386
Query: 261 SATTPSSGWIPTSWP 305
S +T I TS+P
Sbjct: 387 SNSTTYQN-ITTSYP 400
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 24.2 bits (50), Expect = 5.2
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 83 EIERMVNEAEKYRNEDDK--QKETIQAKNALESYCFS 187
+ + ++N + RN D+ QK T+Q +A+ CFS
Sbjct: 331 KFDALLNFITEMRNVVDQLYQKSTLQPNDAVPGLCFS 367
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 24.2 bits (50), Expect = 5.2
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 5 VSAIEKSTNK-ENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 145
++++++S K ENK+ I +E+++R+ +E RNE + +E
Sbjct: 847 LNSVKRSLLKYENKLQIIKSSSSGLEEQMQRINSEISDKRNELESLEE 894
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 23.8 bits (49), Expect = 6.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 77 KEEIERMVNEAEKYRNEDDKQKETIQAKNALE 172
+EE E+ + E K R + DK++E + + LE
Sbjct: 694 REEEEKRILEERKRREKLDKEEEERRRRELLE 725
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 23.8 bits (49), Expect = 6.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 72 SPRKRSSVWLMRQRSTETRMTSKRRPSRPRMHWNL 176
S R+R S S+ +R +K PS R H+ L
Sbjct: 288 SKRRRVSARASSSASSSSRTQAKSIPSHERTHYRL 322
>SPBC19C7.08c |||leucine carboxyl
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 681
Score = 23.8 bits (49), Expect = 6.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 20 KSTNKENKITITNDKGRLSKEEIER 94
K+ +K+ ++ TND LSK +E+
Sbjct: 8 KTKSKDREVRKTNDSSILSKASVEK 32
>SPBC16D10.02 |trm11||tRNA |Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 23.8 bits (49), Expect = 6.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +2
Query: 122 NEDDKQ--KETIQAKNALESYCFSMTSTMEDEKLKE 223
NED ++ + +I K E YC + T EK+KE
Sbjct: 85 NEDARRWIRRSIFCKGIYEIYCIGDSFTRLHEKMKE 120
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 23.8 bits (49), Expect = 6.8
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 11 AIEKSTNKENKITITNDKGRLSKEEIE---RMVNEAEKYRNEDDKQKETIQAKNAL 169
AIE+ N+E ++ + ++ R EEI+ +N + NE E+ + A+
Sbjct: 520 AIERRRNEEEELARSRERARKKAEEIKISSSKMNSSPTITNERSSNVESSKKVEAI 575
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 23.8 bits (49), Expect = 6.8
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 4 RFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 96
R +YRE H + + H R QGR +Y
Sbjct: 324 RTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 23.4 bits (48), Expect = 9.0
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -3
Query: 164 HSWPGWSPFACHPRFCTSLPH*PY-ARSLPWRD 69
HS P W HP+F T L Y + WR+
Sbjct: 52 HSGPVWQLGWAHPKFGTILASASYDGHVIVWRE 84
>SPAC22A12.14c |||BSD domain protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 23.4 bits (48), Expect = 9.0
Identities = 24/109 (22%), Positives = 45/109 (41%)
Frame = +2
Query: 5 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKETIQAKNALESYCF 184
+ AI+ S N E +I D+ +E VN+ +K +E+D + A+ E+
Sbjct: 221 IKAIQ-SGNDEEEIFSWGDERSDEEESDNEQVNDEKKQSSEEDTTENNSAAEVIDET--- 276
Query: 185 SMTSTMEDEKLKEKISEL*QADHLDKCNDTIKWLDSNQLADKEEYEHKQ 331
+ +E K E A H + + +K + N+++ E Q
Sbjct: 277 --VNDLESAVSKGLQIETQPASHDGEVDGEVKEEEENKVSSSSNIEASQ 323
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 23.4 bits (48), Expect = 9.0
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 80 EEIERMVNEAEKYRNEDDKQKETIQAKNALE 172
EE++ +NEA+K NE ++ I+ +L+
Sbjct: 19 EELDAKINEAKKRFNEHKEKLGAIRGGGSLQ 49
>SPAC26H5.04 |||vacuolar import and degradation protein
Vid28|Schizosaccharomyces pombe|chr 1|||Manual
Length = 729
Score = 23.4 bits (48), Expect = 9.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 72 SPRKRSSVWLMRQRSTETRMTSKRR 146
SPR S+++ + R+T+ R+ S+RR
Sbjct: 187 SPRFCSALFQITNRATQLRLYSRRR 211
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 23.4 bits (48), Expect = 9.0
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 2 NVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 130
N S +KS+NKE + + RLS + + K ++ED
Sbjct: 413 NESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 23.4 bits (48), Expect = 9.0
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 185 SMTSTMEDEKLKEKISE 235
S+ MEDEKL EK++E
Sbjct: 114 SLKLIMEDEKLIEKVNE 130
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,171,336
Number of Sequences: 5004
Number of extensions: 20265
Number of successful extensions: 153
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 91899990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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