Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00446X
         (331 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   0.55 
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    22   1.7  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   1.7  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    22   1.7  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    22   1.7  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    22   1.7  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   1.7  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   5.1  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              20   6.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 0.55
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +1

Query: 184  QHDVYHGG*EAQGKDL*TLTSRPSRQVQRHHQ 279
            + +V++GG + + +D  TLTS P +  Q+  Q
Sbjct: 1426 EREVHNGG-QQEDRDRKTLTSAPQQPQQQQQQ 1456



 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 10   RYREVHQQGEQDHHYQRQRSS 72
            R REVH  G+Q+   ++  +S
Sbjct: 1425 REREVHNGGQQEDRDRKTLTS 1445


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 49  HYQRQRSSLQGRDRAY 96
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 49  HYQRQRSSLQGRDRAY 96
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 49  HYQRQRSSLQGRDRAY 96
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 49  HYQRQRSSLQGRDRAY 96
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 49  HYQRQRSSLQGRDRAY 96
           HY R+RS  + R+R Y
Sbjct: 219 HYSRERSCSRDRNREY 234


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 49  HYQRQRSSLQGRDRAY 96
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 10/43 (23%), Positives = 21/43 (48%)
 Frame = +2

Query: 5   VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDD 133
           +  IEK  ++ +K    + + R +   I + V  ++K  + DD
Sbjct: 69  IREIEKLGSERSKSRSPDSRDRSNTSNISKTVILSDKLESSDD 111


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 62  KGRLSKEEIERMVNEAEKYRN 124
           K R S E   +++NE E +RN
Sbjct: 47  KLRDSSEARIKLINEEENFRN 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,707
Number of Sequences: 438
Number of extensions: 1579
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)