Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00442
         (820 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   2.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   2.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   2.6  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.9  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   7.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.8  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 323 LFNEAVLAASTYFDSKRQKIPNVIDEEK 406
           L+N  ++  ST +  K +KIP   +E K
Sbjct: 679 LYNALLILISTVYAVKTRKIPENFNESK 706


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +2

Query: 227 ETSIRSKRSIDNTVKAVHGENLFCLHPNDVEPLFNEAVLAASTYFDSKRQKI 382
           E S  + RS++  +  V  E  + L  +  E L  +  +  ST+FD   Q++
Sbjct: 96  EESFPTARSLEKLLCNVEAEENYNLLEDIYETLSYDCDVDVSTFFDQLGQEV 147


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 323 LFNEAVLAASTYFDSKRQKIPNVIDEEK 406
           L+N  ++  ST +  K +KIP   +E K
Sbjct: 769 LYNALLILISTVYAVKTRKIPENFNESK 796


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -3

Query: 809 VVWM*AACIGIPEKTQ 762
           V+W+ A C+ +P+  Q
Sbjct: 177 VIWLLALCLAVPQAIQ 192


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 809 VVWM*AACIGIP 774
           +VW+ AACI +P
Sbjct: 164 LVWLGAACISLP 175


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 744 QRHHELFPIFTS 709
           Q HH L+P F+S
Sbjct: 66  QAHHRLYPAFSS 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,850
Number of Sequences: 438
Number of extensions: 4087
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)