Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00441
(371 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0339 - 22400534-22400647,22401264-22401398,22401491-224015... 71 2e-13
08_02_1576 + 27965862-27965864,27965952-27966026,27966113-279662... 70 5e-13
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 56 1e-08
03_05_0586 - 25875703-25876332,25876426-25876713,25877064-258771... 30 0.67
01_06_0983 - 33583784-33583994,33584060-33584919 29 0.88
02_03_0349 + 18010414-18014283 29 1.5
08_02_1171 + 24880363-24881355,24882553-24882702,24883505-248842... 28 2.0
10_01_0146 - 1719997-1720386,1721498-1721515 28 2.7
06_03_1117 + 27750291-27750338,27751360-27751812,27751987-277521... 27 3.6
04_03_0916 + 20794240-20794246,20794585-20796545 27 3.6
03_05_0742 + 27310404-27310457,27311281-27311286,27311350-273114... 27 4.7
12_02_1263 + 27423411-27423464,27423985-27424104,27424200-274242... 27 6.2
02_05_0072 - 25598690-25598702,25598820-25599001,25599111-255992... 27 6.2
01_06_1624 + 38725452-38725537,38725823-38725844,38726194-38728038 27 6.2
11_06_0621 + 25587476-25587604,25588230-25588423,25588800-255888... 26 8.2
04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962... 26 8.2
03_06_0766 - 36106116-36106230,36106598-36106716,36106880-361069... 26 8.2
02_05_0114 + 25958834-25961296 26 8.2
02_02_0060 + 6446317-6446871,6447836-6448276,6449035-6449265,644... 26 8.2
>09_06_0339 -
22400534-22400647,22401264-22401398,22401491-22401565,
22401646-22401648
Length = 108
Score = 71.3 bits (167), Expect = 2e-13
Identities = 31/51 (60%), Positives = 43/51 (84%)
Frame = +2
Query: 107 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREK 259
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L ++
Sbjct: 37 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAMKDLMDR 87
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 256 KGLIKQVVQHHGQVIYTRAT 315
+GLI+ V H Q IYTRAT
Sbjct: 87 RGLIRMVSVHCSQQIYTRAT 106
>08_02_1576 +
27965862-27965864,27965952-27966026,27966113-27966247,
27967080-27967193
Length = 108
Score = 70.1 bits (164), Expect = 5e-13
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +2
Query: 107 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIEL 250
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL++ GSLARRA+ +L
Sbjct: 37 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDL 84
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 256 KGLIKQVVQHHGQVIYTRAT 315
+GLI+ V H Q IYTRAT
Sbjct: 87 RGLIRMVSVHSSQQIYTRAT 106
>11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 55.6 bits (128), Expect = 1e-08
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +2
Query: 107 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLK 211
+NN VLFDK TY+KL EVP+YK ITP+V+SERL+
Sbjct: 971 VNNSVLFDKATYDKLLSEVPKYKQITPSVLSERLR 1005
>03_05_0586 -
25875703-25876332,25876426-25876713,25877064-25877194,
25877299-25877812
Length = 520
Score = 29.9 bits (64), Expect = 0.67
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 4 GFGQTASKNTEEEGRIRWRQSQEEEVVQRKSS*QVEQPGV 123
G G + + E G+ +WR+ +EEE Q+K + E+ V
Sbjct: 347 GRGGESEERRRERGKGKWREEEEEEEEQQKGQEEEEEEQV 386
>01_06_0983 - 33583784-33583994,33584060-33584919
Length = 356
Score = 29.5 bits (63), Expect = 0.88
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -3
Query: 279 DYLFDETFSLSSMSALLAREPRTFNLSDTTAGVISLYCGTSLYSFSYVGLS---NNTWLF 109
DY+ ++++M AL A +PR+F A V YC S + GL +N+WLF
Sbjct: 142 DYVAKFNRAIAAMKALPADDPRSF---AAQASVHCAYCDGSYSPDGFPGLDLQVHNSWLF 198
>02_03_0349 + 18010414-18014283
Length = 1289
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 131 KPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKV 262
KPT E+L K +PQ K++ AV E + + L +LR+ V
Sbjct: 39 KPTRERLEKLLPQIKVVLDAVDMEHIGDQSDALDAWLWQLRDAV 82
>08_02_1171 +
24880363-24881355,24882553-24882702,24883505-24884210,
24885012-24885404,24885759-24885805,24886088-24886111
Length = 770
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 366 FFFFNLYHSLCDWIIALGRTRVDHLPMMLDYLF 268
F + NL+H++ DW A +RV LP + +F
Sbjct: 343 FEYANLFHTITDWYSAYVSSRVTDLPNRPNVVF 375
>10_01_0146 - 1719997-1720386,1721498-1721515
Length = 135
Score = 27.9 bits (59), Expect = 2.7
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 6 LRPNSLKKHRRRRKDPVAAKPRRRS 80
++P+ + RRRR +P +PRRR+
Sbjct: 81 MQPDDGGQRRRRRSEPATTQPRRRA 105
>06_03_1117 +
27750291-27750338,27751360-27751812,27751987-27752161,
27752227-27752551,27752705-27752786,27752820-27752889,
27753341-27753420,27753514-27753750
Length = 489
Score = 27.5 bits (58), Expect = 3.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 4 GFGQTASKNTEEEGRIRWRQSQEEEVVQRKSS*QVEQPG 120
GFG S N+ +RWR + +++ Q Q ++PG
Sbjct: 427 GFGIAISANSMLVEYLRWRSRRNQQLAQTVDDGQRQEPG 465
>04_03_0916 + 20794240-20794246,20794585-20796545
Length = 655
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 197 IRQQV*LACTVGLPCTVSH-MWVYQTTPGCSTCHELFLWTTSSSWLCRHRI 48
I Q + L +G C + VY+ P S H+LF T+ +W R+ I
Sbjct: 399 IIQHINLVKLIGFCCEGGRRLLVYEHMPNRSLDHQLFQTNTTLTWNIRYEI 449
>03_05_0742 +
27310404-27310457,27311281-27311286,27311350-27311469,
27311597-27311695,27311787-27311795,27311843-27311980,
27312084-27312218,27312308-27312517,27312592-27312798,
27312891-27313010,27313079-27313198,27313279-27313401,
27313501-27313605,27313764-27313908,27314658-27315148,
27315236-27315268,27315556-27315637,27315747-27315907,
27316021-27316206,27316294-27316476,27316573-27316751,
27317009-27317105
Length = 1000
Score = 27.1 bits (57), Expect = 4.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 210 FNLSDTTAGVISLYCGTSLYSFSYVGL--SNNTWLFNLSRTFPLDHFFFL 67
F ++ A +I++Y + S +G + WL+NL FPLD FL
Sbjct: 843 FFVAQLIATLIAVYANWAFTSIKGIGWGWAGIVWLYNLVFYFPLDIIKFL 892
>12_02_1263 +
27423411-27423464,27423985-27424104,27424200-27424298,
27424405-27424542,27424647-27424706,27424865-27425044,
27425132-27425338,27425415-27425534,27425609-27425728,
27425819-27425941,27426074-27426178,27426379-27426523,
27426967-27427131,27427228-27427466,27427553-27427585,
27427894-27427975,27428100-27428260,27428422-27428607,
27428700-27428882,27428969-27429147,27429386-27429482
Length = 931
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -3
Query: 210 FNLSDTTAGVISLYCGTSLYSFSYVGL--SNNTWLFNLSRTFPLDHFFFL 67
F ++ A +I++Y + S +G + WL+NL FPLD FL
Sbjct: 774 FLVAQLIATLIAVYADWAFTSIKGIGWGWAGIVWLYNLIFYFPLDIIKFL 823
>02_05_0072 -
25598690-25598702,25598820-25599001,25599111-25599269,
25599450-25599753,25600176-25600332,25600439-25600484
Length = 286
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 225 WREEHSSSLGKRSHQTGSPTSWAGDLHACD 314
WR E S SH TG + DLH D
Sbjct: 173 WRLEESQMTSGTSHYTGETEAVKQDLHTAD 202
>01_06_1624 + 38725452-38725537,38725823-38725844,38726194-38728038
Length = 650
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = -3
Query: 255 SLSSMSALLAREPRTFNLSDTTAGV---ISLYCGT 160
S S + R+P ++NL D TAG + L CG+
Sbjct: 173 SCSCLKGFSIRDPNSWNLGDQTAGCRRNVMLQCGS 207
>11_06_0621 +
25587476-25587604,25588230-25588423,25588800-25588874,
25589434-25591852
Length = 938
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 170 TVGLPCTVSHMWVYQTTPGCSTCHELFLWTTSSSWLCRHRILPS 39
T PC++S M V C TC+++ S +CR ++PS
Sbjct: 264 TCATPCSLSFM-VDCLIKACITCYDVQATICLFSGICRLGVVPS 306
>04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,
9625520-9626032,9626801-9629153
Length = 1342
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 110 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERL--KVRGSLARRALIELREKVSSNR 274
NN+V+ KP Y ++P + +V++++ K+ G L+ + I++ E ++ R
Sbjct: 1156 NNEVIQQKPIYVVFDGKLPGVYISFEEIVAQKIDAKLMGGLSWKKYIDIDEALTQAR 1212
>03_06_0766 -
36106116-36106230,36106598-36106716,36106880-36106960,
36107062-36107118,36107350-36107373,36107810-36107909,
36107983-36108053,36108132-36108236,36108674-36108847,
36109406-36109555,36109701-36109871,36109968-36110024,
36110107-36110142,36110165-36110357,36110439-36110578,
36110960-36111166,36111442-36111498,36111711-36111809,
36112289-36112408,36112865-36113032,36113450-36113510,
36113611-36113720,36114132-36114263,36114344-36114511,
36115118-36115182,36115242-36115372,36115450-36115487,
36116272-36116373,36116480-36116537,36117479-36117580,
36117695-36117909,36118158-36118307,36118699-36118858,
36118984-36119042,36119287-36119443,36119536-36119681,
36121376-36121648,36122889-36122891
Length = 1457
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 146 KLYKEVPQYKLITPAVVSERLKVRGSLARRALIELR 253
+ Y + YK + A+++ + RG +ARR L EL+
Sbjct: 770 RCYLVLSNYKRMMKAIITTQCAWRGRVARRELRELK 805
>02_05_0114 + 25958834-25961296
Length = 820
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 170 TVGLPCTVSHMWVYQTTPGCSTCHELFLWTTSSSWLCRHRILPS 39
T PC++S M V C TC+++ S +CR ++PS
Sbjct: 146 TCATPCSLSFM-VDCLIKACITCYDVQATICLFSGICRLGVVPS 188
>02_02_0060 +
6446317-6446871,6447836-6448276,6449035-6449265,
6449382-6449473,6449555-6449615,6451541-6451618,
6451853-6452014
Length = 539
Score = 26.2 bits (55), Expect = 8.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 328 DHRPWSHACRSPAHDVGL 275
DH+P H+ RS H++G+
Sbjct: 431 DHKPMGHSARSLIHNIGV 448
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,625,446
Number of Sequences: 37544
Number of extensions: 221951
Number of successful extensions: 710
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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