Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00440
(550 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 94 2e-18
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 93 4e-18
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 92 7e-18
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 92 7e-18
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 85 1e-15
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 82 1e-14
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 81 2e-14
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 79 5e-14
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 77 3e-13
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 77 4e-13
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 75 8e-13
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 73 4e-12
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 72 8e-12
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 72 1e-11
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 70 3e-11
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 70 3e-11
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 67 3e-10
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 65 9e-10
UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5; Archae... 65 1e-09
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 64 2e-09
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 61 1e-08
UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Re... 61 2e-08
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 60 3e-08
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 58 1e-07
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 56 4e-07
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 56 5e-07
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 55 9e-07
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 51 2e-05
UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum... 47 3e-04
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 46 4e-04
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 46 6e-04
UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeu... 45 0.001
UniRef50_Q1Z582 Cluster: Endo-beta-1,3-1,4 glucanase; n=1; Photo... 36 0.62
UniRef50_Q0S512 Cluster: Amino acid transporter, APC family prot... 34 1.9
UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 94.3 bits (224), Expect = 2e-18
Identities = 44/63 (69%), Positives = 53/63 (84%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 435
V ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDL
Sbjct: 72 VGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDL 131
Query: 436 DRI 444
DRI
Sbjct: 132 DRI 134
Score = 90.6 bits (215), Expect = 2e-17
Identities = 40/67 (59%), Positives = 51/67 (76%)
Frame = +2
Query: 44 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 223
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 224 LRHIYIR 244
RH+Y+R
Sbjct: 61 ARHLYLR 67
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 93.1 bits (221), Expect = 4e-18
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 235
TVKDV + VK +AHLK++GK+++PE +D+VKTARFKEL PYDPDW+Y R A+I R I
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67
Query: 236 YIRSPV 253
Y+R +
Sbjct: 68 YLRQGI 73
Score = 77.0 bits (181), Expect = 3e-13
Identities = 31/58 (53%), Positives = 46/58 (79%)
Frame = +1
Query: 271 KIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 444
KI+GGR+RNG P HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 80 KIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 137
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 92.3 bits (219), Expect = 7e-18
Identities = 41/67 (61%), Positives = 52/67 (77%)
Frame = +2
Query: 44 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 223
M V+VKDV+ VK +A LKKTGKV++P+ D+VK + +LAPY+PDWFYVRCAAI
Sbjct: 1 MAPVSVKDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNPDWFYVRCAAI 60
Query: 224 LRHIYIR 244
LRH+YIR
Sbjct: 61 LRHLYIR 67
Score = 70.5 bits (165), Expect = 2e-11
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +1
Query: 271 KIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 444
K F +KRNGV PSH + GS+ RKA+Q +EAL L +K + GGR LT+ GRRDLDR+
Sbjct: 76 KAFSRKKRNGVKPSHRSLAHGSVIRKAIQQMEALGLCQKREGGGRSLTSAGRRDLDRL 133
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 92.3 bits (219), Expect = 7e-18
Identities = 40/70 (57%), Positives = 51/70 (72%)
Frame = +2
Query: 44 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 223
M V+VKDV+ K + AA LK++GK+ P+ +D+VKT KELAPYDPDW+YVR AAI
Sbjct: 1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAI 60
Query: 224 LRHIYIRSPV 253
RHIY+R V
Sbjct: 61 ARHIYLRKQV 70
Score = 65.7 bits (153), Expect = 7e-10
Identities = 30/63 (47%), Positives = 43/63 (68%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 435
V + K++GG G+ PSH SGS+ RK +QSLE + ++EK +GGR ++ QG+RDL
Sbjct: 72 VGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDL 131
Query: 436 DRI 444
DRI
Sbjct: 132 DRI 134
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 85.0 bits (201), Expect = 1e-15
Identities = 34/67 (50%), Positives = 51/67 (76%)
Frame = +2
Query: 44 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 223
+R VTV+DV+ + +K A HLK++GK+++P D+VKTA FKE +P DPDW+Y+R A+I
Sbjct: 10 VRGVTVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAASI 69
Query: 224 LRHIYIR 244
R +Y+R
Sbjct: 70 ARKVYLR 76
Score = 62.1 bits (144), Expect = 8e-09
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Frame = +1
Query: 232 YLHSLTC*VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK----VQDG 399
YL T V ++ K++GG R GV HF ++SG + R LQ LE +K+VEK V G
Sbjct: 74 YLRQYTG-VGSLKKVYGGAARKGVHRQHFQKASGGLIRHILQQLEEMKVVEKCPEGVNKG 132
Query: 400 GRILTTQGRRDLDRI 444
GR +T+ G++DLDRI
Sbjct: 133 GRKITSHGQQDLDRI 147
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 81.8 bits (193), Expect = 1e-14
Identities = 34/66 (51%), Positives = 47/66 (71%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 235
TVKDV + V T A+HLK+ G +++P +D +KTA +ELAPYDPDW Y+R A+I R +
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKL 71
Query: 236 YIRSPV 253
YIR +
Sbjct: 72 YIRGGI 77
Score = 55.6 bits (128), Expect = 7e-07
Identities = 25/56 (44%), Positives = 38/56 (67%)
Frame = +1
Query: 271 KIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLD 438
KI+G RKR G+ P +SSG + R +LQ LE L + EK + GGR +T++G+ ++D
Sbjct: 84 KIYGDRKRRGMKPCRSSKSSGGLIRYSLQQLEKLGVAEKDERGGRRITSKGQSEMD 139
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 81.0 bits (191), Expect = 2e-14
Identities = 36/61 (59%), Positives = 46/61 (75%)
Frame = +2
Query: 68 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 247
++Q +IV+ +A LKK+GKVKVPE DLVK KELAP D DW+YVR A++ R +YIRS
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRS 69
Query: 248 P 250
P
Sbjct: 70 P 70
Score = 68.5 bits (160), Expect = 9e-11
Identities = 35/62 (56%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Frame = +1
Query: 232 YLHSLTC*VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRI 408
Y+ S T V + +++G KR GVTP+HF ++SGS+ RKALQ+LEA+K VEK DG GRI
Sbjct: 66 YIRSPTG-VGALRRVYGSNKRRGVTPNHFAKASGSVIRKALQTLEAIKWVEKHPDGNGRI 124
Query: 409 LT 414
LT
Sbjct: 125 LT 126
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 79.4 bits (187), Expect = 5e-14
Identities = 33/72 (45%), Positives = 50/72 (69%)
Frame = +2
Query: 38 GKMRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCA 217
GK + T+KDV + +KT A H K+ GK+ VP +++K++ +E AP +PDW+Y+RCA
Sbjct: 24 GKRKGATLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCA 83
Query: 218 AILRHIYIRSPV 253
A+LR IY+R V
Sbjct: 84 AVLRAIYLRPGV 95
Score = 35.5 bits (78), Expect = 0.82
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +1
Query: 265 VTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 444
++K FG +K G P H SS A +SL L LVE G+ LT +G + D +
Sbjct: 100 LSKRFGNKKNYGSRPEHTVTSSTGPLHWACKSLTKLGLVEPGAQSGQRLTRKGHKFADSL 159
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 77.0 bits (181), Expect = 3e-13
Identities = 31/58 (53%), Positives = 46/58 (79%)
Frame = +1
Query: 271 KIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 444
KI+GGR+RNG P HFC+SSG+I+R LQ L+ + +++ GGR++T+QGRRDLD++
Sbjct: 100 KIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQV 157
Score = 73.3 bits (172), Expect = 3e-12
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 20/86 (23%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKV--------------------KVPEHMDLVKTARFKE 175
TVKDV + VK +AHLK++GK+ ++PE +D+VKTARFKE
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67
Query: 176 LAPYDPDWFYVRCAAILRHIYIRSPV 253
L PYDPDW+Y R A+I R IY+R +
Sbjct: 68 LPPYDPDWYYTRAASIARKIYLRQGI 93
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 76.6 bits (180), Expect = 4e-13
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +2
Query: 59 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 238
+KDV +K A HLKK+GK+++PE +D VKT KELAP +PDW Y+R AAI R +Y
Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVY 66
Query: 239 IRSPV 253
+ + +
Sbjct: 67 LNNGI 71
Score = 47.2 bits (107), Expect = 3e-04
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 435
V + + +G + PSH SG + R LQ LE + +V K+Q GR LT +GR+D+
Sbjct: 73 VMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVGKIQ-SGRSLTKEGRKDM 131
Query: 436 DRI 444
D+I
Sbjct: 132 DKI 134
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 75.4 bits (177), Expect = 8e-13
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +2
Query: 50 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 229
+ ++KD D VK A H+K G ++ P+ +D KT+ KELAP DPDWFY+R AA+LR
Sbjct: 25 NTSLKDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDPDWFYIRAAAVLR 84
Query: 230 HIY 238
H+Y
Sbjct: 85 HLY 87
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEK-VQDGGRILTTQG 423
V + K++ +KRNG P+H CR+SG I R +Q LE++ +E+ ++ GR L+ +G
Sbjct: 94 VDRLRKVYSSKKRNGSAPNHTCRASGKILRTIVQQLESIGFLEQDLKKHGRRLSRKG 150
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 72.9 bits (171), Expect = 4e-12
Identities = 31/65 (47%), Positives = 45/65 (69%)
Frame = +2
Query: 50 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 229
+VT+KDV + + T A LKKTG+V++P+ D+ KTA ++EL P +PDW Y R A + R
Sbjct: 5 AVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLAR 64
Query: 230 HIYIR 244
+YIR
Sbjct: 65 KVYIR 69
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGRILTTQGRRD 432
V T ++FGG +RNGV P+HF +G R L+ L+ LK++E GGR +T GRRD
Sbjct: 74 VATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTITATGRRD 133
Query: 433 LDRI 444
LDRI
Sbjct: 134 LDRI 137
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 72.1 bits (169), Expect = 8e-12
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 235
T KDV +++ A LKK GK+ +PE +D VKTA KEL P + DW Y+R A+ILRH+
Sbjct: 18 TAKDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPPQNSDWLYIRAASILRHL 77
Query: 236 YIRSPV 253
Y+R V
Sbjct: 78 YVRPNV 83
Score = 43.6 bits (98), Expect = 0.003
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVE-KVQDGGRILTTQGRRD 432
V ++K +G ++RNG +H +S I R L L++L LVE G R L+ QG+R+
Sbjct: 85 VGALSKFYGRKQRNGTARNHSAVASRGIIRYCLIQLQSLGLVEFNPNTGTRRLSPQGQRE 144
Query: 433 LDRI 444
LD I
Sbjct: 145 LDSI 148
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 71.7 bits (168), Expect = 1e-11
Identities = 34/66 (51%), Positives = 42/66 (63%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 235
TV DV D ++ VA LK KVK PE ++ VKT KE P +PDW+YVR AA+LR +
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRV 62
Query: 236 YIRSPV 253
YI PV
Sbjct: 63 YIDGPV 68
Score = 52.4 bits (120), Expect = 7e-06
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 435
V ++ +GG+K G P F R SG+I R+ALQ LE L+++ ++ GR++T +GR L
Sbjct: 70 VNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKR-EENGRVITPEGRSFL 128
Query: 436 DR 441
D+
Sbjct: 129 DK 130
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 70.1 bits (164), Expect = 3e-11
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +2
Query: 74 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 232
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPY+ +WFY R A+ RH
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYEENWFYTRAASTARH 208
Score = 66.1 bits (154), Expect = 5e-10
Identities = 33/51 (64%), Positives = 38/51 (74%)
Frame = +1
Query: 292 RNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 444
R+ V PSHF R S S A + LQ+LE LK+VEK QDGGR L QG+RDLDRI
Sbjct: 207 RHRVRPSHFSRGSKSAACRVLQALEGLKMVEKDQDGGRKLIPQGQRDLDRI 257
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 70.1 bits (164), Expect = 3e-11
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 235
TVKDV ++ A +LKK K+K+PE +VKT KE +P D DW YVR AA+ R I
Sbjct: 57 TVKDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPIDQDWMYVRAAALARKI 116
Query: 236 YIR 244
Y+R
Sbjct: 117 YVR 119
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 66.9 bits (156), Expect = 3e-10
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Frame = +2
Query: 47 RSVTVKDVE---QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCA 217
+++ ++DVE K + +A LK+ GK+ +P +D VKT+ EL P D DW+YVR A
Sbjct: 73 QNLQIEDVEILTAQKFIAAYSAFLKRQGKLPIPGWVDTVKTSCSNELPPQDSDWYYVRAA 132
Query: 218 AILRHIYIRSPV 253
A+ RHIY+R V
Sbjct: 133 AVARHIYMRKTV 144
Score = 55.6 bits (128), Expect = 7e-07
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRD 432
V + K+ G K G P+H +SGS+ RK +QSLE + ++E ++ GGR +T G+RD
Sbjct: 146 VGRLRKVHGSTKNRGSRPNHHVDASGSVDRKIIQSLEKIGVLEYDEEKGGRRITQAGQRD 205
Query: 433 LDRI 444
LDRI
Sbjct: 206 LDRI 209
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 65.3 bits (152), Expect = 9e-10
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 235
TV DV D +++ VA LKK ++K P KT KE+ P DPDW++ R AA+LR +
Sbjct: 3 TVYDVPADHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRV 62
Query: 236 YIRSPV 253
Y+ P+
Sbjct: 63 YVDGPL 68
Score = 43.6 bits (98), Expect = 0.003
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQD-GGRILTTQGRRD 432
V+ + +GG K G P+ F + SGS+ RKALQ LEA L+ V D GR ++ G
Sbjct: 70 VERMRSFYGGSKNRGSKPNAFRKGSGSVLRKALQQLEAAGLI--VHDKTGRKVSPAGMAF 127
Query: 433 LDRI 444
LD +
Sbjct: 128 LDSV 131
>UniRef50_O59041 Cluster: 30S ribosomal protein S19e; n=5;
Archaea|Rep: 30S ribosomal protein S19e - Pyrococcus
horikoshii
Length = 150
Score = 64.9 bits (151), Expect = 1e-09
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 235
TV DV D +V+ VA LK+ ++K PE VKT R KE P DW+Y R A+ILR +
Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRV 62
Query: 236 YIRSPV 253
YI PV
Sbjct: 63 YIDGPV 68
Score = 62.5 bits (145), Expect = 6e-09
Identities = 29/63 (46%), Positives = 40/63 (63%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 435
++ + +GGRK G P F ++ GSI RKALQ LEA +EKV GR++T +GR L
Sbjct: 70 IERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFL 129
Query: 436 DRI 444
D+I
Sbjct: 130 DKI 132
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 235
TVKDV ++ A+HLKK K+ +PE T+ +ELAP D DW Y+R AA+ R +
Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKV 68
Query: 236 YIR 244
Y++
Sbjct: 69 YLK 71
Score = 38.3 bits (85), Expect = 0.12
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-----GRILTTQ 420
+ T+ IFG K G + G I R AL+SLE LK++ K ++ R++T +
Sbjct: 76 ISTLKHIFGSNKDRGNLRNKHQACHGKILRWALKSLEDLKIIRKDKNSATKKFSRVITKE 135
Query: 421 GRRDLDRI 444
G +L+RI
Sbjct: 136 GMTELNRI 143
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 61.3 bits (142), Expect = 1e-08
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +2
Query: 50 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 229
+ ++ D + D + A ++ + P+ +D VKT+ KELAP DP WFY+R AAILR
Sbjct: 25 NTSLNDCQPDVFIAAFAQQMELKNYIDPPKWIDYVKTSCAKELAPQDPKWFYIRSAAILR 84
Query: 230 HIY 238
H+Y
Sbjct: 85 HLY 87
Score = 46.0 bits (104), Expect = 6e-04
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 271 KIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDG-GRILTTQG 423
+++ RKR G P+H C +SG I R +Q LEA +EK +D GR L+ +G
Sbjct: 99 RVYASRKRRGCAPNHTCPASGKIIRTIVQQLEANGFLEKSKDNKGRRLSRRG 150
>UniRef50_Q8TUY1 Cluster: Ribosomal protein S19E; n=2; Archaea|Rep:
Ribosomal protein S19E - Methanopyrus kandleri
Length = 149
Score = 60.9 bits (141), Expect = 2e-08
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +2
Query: 68 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRS 247
V ++V+ +A LK ++K PE VKT R KE P DPDW+Y+R A+ILR +Y+
Sbjct: 7 VPGSELVERLAEKLKDFEEIKPPEWAKYVKTGRHKERPPEDPDWWYMRAASILRRVYMDG 66
Query: 248 PV 253
PV
Sbjct: 67 PV 68
Score = 52.0 bits (119), Expect = 9e-06
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 435
V + +GGR+ G P F + SG+I RK LQ LE LVEK ++ GR++T +GR +
Sbjct: 70 VSRLRTYYGGRQDRGARPERFRKGSGAIIRKILQQLEEAGLVEKTEE-GRVVTPEGRSLV 128
Query: 436 D 438
D
Sbjct: 129 D 129
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 60.5 bits (140), Expect = 3e-08
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = +2
Query: 62 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYI 241
+++ D +V +A H + T ++ PE DLVKTA K+LAP + +W+Y+R AA+ R IY+
Sbjct: 14 REIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAPANNNWWYIRAAAVTRQIYL 73
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 58.0 bits (134), Expect = 1e-07
Identities = 22/65 (33%), Positives = 41/65 (63%)
Frame = +2
Query: 59 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 238
+KDV+ + + A +LK K+ P+ + VKT + ++LAP D DW++++ ++ILR +Y
Sbjct: 50 IKDVDAELFISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAPLDEDWYFIKTSSILRRLY 109
Query: 239 IRSPV 253
I +
Sbjct: 110 IHPDI 114
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 56.4 bits (130), Expect = 4e-07
Identities = 27/63 (42%), Positives = 37/63 (58%)
Frame = +2
Query: 53 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 232
V+VK V D ++ V+ LK+ K+K P + VKT KE P DW YVR A++LR
Sbjct: 2 VSVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRK 61
Query: 233 IYI 241
+YI
Sbjct: 62 LYI 64
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 56.0 bits (129), Expect = 5e-07
Identities = 27/61 (44%), Positives = 36/61 (59%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 435
++T I+GGR+ G P HF ++ GS+ RK LQ LE LV KV GR ++ GR L
Sbjct: 72 IETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLL 131
Query: 436 D 438
D
Sbjct: 132 D 132
Score = 50.0 bits (114), Expect = 4e-05
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 53 VTVKDVEQDKIVKTVAAHLK-KTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILR 229
V +V D +++ VA LK K +VK P KT KE P D DW+YVR A+ILR
Sbjct: 2 VNALEVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILR 61
Query: 230 HIYIRSP 250
+Y +SP
Sbjct: 62 KLY-KSP 67
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 55.2 bits (127), Expect = 9e-07
Identities = 30/66 (45%), Positives = 37/66 (56%)
Frame = +2
Query: 56 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHI 235
TV DV D ++K VA LK V PE VKT KE +P DW+Y+R A+I R +
Sbjct: 3 TVYDVPADLLIKRVAERLKDM--VAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRV 60
Query: 236 YIRSPV 253
YI PV
Sbjct: 61 YIDGPV 66
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +1
Query: 256 VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 435
++ + +GGRKR G P F + SG+I R AL LE L V+K ++ GR++T GR L
Sbjct: 68 IERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQLEQLGFVKKTRE-GRVVTPMGRSFL 126
Query: 436 DRI 444
D++
Sbjct: 127 DKV 129
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 50.8 bits (116), Expect = 2e-05
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = +1
Query: 232 YLHSLTC*VKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRIL 411
YLH + + K +GG K +G +H + G+I R A+ LE L +EKV+ GRI+
Sbjct: 62 YLHG-PIGINELRKDYGGGKPSGYGAAHHKDAGGAIIRNAIHGLEKLGYLEKVEKKGRIV 120
Query: 412 TTQGRRDLDRI 444
+ QG + LDR+
Sbjct: 121 SKQGMQKLDRL 131
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 59 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 238
V DV D ++ +A LK + P + VKT + P + DW++ RCA+I+R IY
Sbjct: 4 VYDVPADVLIGKLAEILKNED-IPAPSWIPFVKTGAHADKPPQNRDWWHTRCASIMRKIY 62
Query: 239 IRSPV 253
+ P+
Sbjct: 63 LHGPI 67
>UniRef50_A7D1C3 Cluster: Ribosomal protein S19e; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S19e -
Halorubrum lacusprofundi ATCC 49239
Length = 163
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/67 (34%), Positives = 40/67 (59%)
Frame = +2
Query: 53 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 232
VT+ DV D +++ VAA L+ ++ P+ ++ K+ KEL P D++YVR A++LR
Sbjct: 14 VTIYDVPGDALIEEVAARLED--RIDEPDWVEFAKSGAGKELPPEQEDFWYVRSASLLRK 71
Query: 233 IYIRSPV 253
+ P+
Sbjct: 72 VAQNEPI 78
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 46.4 bits (105), Expect = 4e-04
Identities = 17/61 (27%), Positives = 37/61 (60%)
Frame = +2
Query: 59 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIY 238
+KD+ +D + A L+K+G++ +P +++ K++ K+ +P +W + R A+I+ Y
Sbjct: 5 LKDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFY 64
Query: 239 I 241
I
Sbjct: 65 I 65
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 46.0 bits (104), Expect = 6e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 283 GRKRNGVTPSHFCRSSGSIARKALQSLEALK 375
GR+RNGV PSHF R S ++AR+ LQ+LE LK
Sbjct: 77 GRQRNGVRPSHFNRGSKTVARRVLQALEGLK 107
>UniRef50_A0RYF9 Cluster: Ribosomal protein S19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S19E - Cenarchaeum
symbiosum
Length = 144
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +1
Query: 277 FGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDLDRI 444
+GG K G ++ ++ G+I R A+ LE L +EK+ GRI++ QG + LDR+
Sbjct: 70 YGGGKPRGYGAANHRKAGGAIIRNAVHGLEKLGYIEKLDKKGRIVSRQGMQKLDRL 125
Score = 41.9 bits (94), Expect = 0.009
Identities = 19/59 (32%), Positives = 34/59 (57%)
Frame = +2
Query: 77 DKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRHIYIRSPV 253
D ++ +A LKK ++ P+ + VKT + P D W++ RCA+++R IY+ P+
Sbjct: 4 DVLIGRLAEILKKE-ELPRPDWVPFVKTGVHADKPPQDRAWWHTRCASLMRKIYLHGPI 61
>UniRef50_Q1Z582 Cluster: Endo-beta-1,3-1,4 glucanase; n=1;
Photobacterium profundum 3TCK|Rep: Endo-beta-1,3-1,4
glucanase - Photobacterium profundum 3TCK
Length = 265
Score = 35.9 bits (79), Expect = 0.62
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 165 ASKSWLRMTLIGSMCVVLPSFVIFTFAHLLSKDCDQDLWWAQT*WSNTFTFL 320
+S S+ M L ++ V PSF +F L+ DQ LWW WSN F F+
Sbjct: 3 SSSSFRTMPLFIALLVATPSFSATSFDDPLTNMNDQ-LWWLADGWSNGFPFI 53
>UniRef50_Q0S512 Cluster: Amino acid transporter, APC family
protein; n=4; Actinomycetales|Rep: Amino acid
transporter, APC family protein - Rhodococcus sp.
(strain RHA1)
Length = 526
Score = 34.3 bits (75), Expect = 1.9
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 135 LSTWIL*RQLASKSWLRMTLIGSMCVVLPSFVIFTFAHLLSKDCDQDLWWAQT*WSNTFT 314
L+TWI R + + L++ L+G V+L +F + H+ + D L + + W N FT
Sbjct: 162 LATWIASRGITTSERLQVALVGFQMVLLIAFAVVALVHVGNGDAPAGLSFDLS-WFNPFT 220
Query: 315 FL 320
L
Sbjct: 221 GL 222
>UniRef50_Q5H6B5 Cluster: Putative uncharacterized protein; n=1;
Xanthomonas oryzae pv. oryzae|Rep: Putative
uncharacterized protein - Xanthomonas oryzae pv. oryzae
Length = 390
Score = 33.9 bits (74), Expect = 2.5
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 272 RSLVGA-NVME*HLHISAGHQAVLHARLCNRWRH 370
R+L GA +E H +AG + +HAR+ RWRH
Sbjct: 190 RALAGAAGAVEQHRRQAAGQRIFMHARIAQRWRH 223
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,556,350
Number of Sequences: 1657284
Number of extensions: 9007017
Number of successful extensions: 22420
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 21748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22407
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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