Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00439
         (741 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060618-1|AAL28166.1|  665|Drosophila melanogaster GH04232p pro...    54   2e-07
AE014134-235|AAF51389.1|  665|Drosophila melanogaster CG5397-PA ...    54   2e-07

>AY060618-1|AAL28166.1|  665|Drosophila melanogaster GH04232p
           protein.
          Length = 665

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 28/70 (40%), Positives = 39/70 (55%)
 Frame = +2

Query: 254 LPAYQSVRQWSAGGPAYLYSFEYVGNLSKGSYFLPGLALTDNSNDMKVYENKMKGPAHGD 433
           LPA  + + WS   PA++YSFEY G  SKG  FL GL +       +   +K +   HGD
Sbjct: 467 LPAVLTTQVWSRLAPAFMYSFEYNGTKSKGINFLKGLPIVS-----ETAHDKPETVGHGD 521

Query: 434 ELAYIFEPLD 463
           E+ Y+F+  D
Sbjct: 522 EIGYMFDAND 531



 Score = 29.9 bits (64), Expect = 3.8
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = +3

Query: 195 LNAVDGLSQIVEATGDALFNFLRTRVFASGAQGVPLIYIALNTLGTLVKGHIFYLDLPLL 374
           LN    LS++VE+T D LFN          ++  P    +    GT  KG  F   LP++
Sbjct: 447 LNVDQVLSKVVESTTDVLFNLPAVLTTQVWSRLAPAFMYSFEYNGTKSKGINFLKGLPIV 506


>AE014134-235|AAF51389.1|  665|Drosophila melanogaster CG5397-PA
           protein.
          Length = 665

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 28/70 (40%), Positives = 39/70 (55%)
 Frame = +2

Query: 254 LPAYQSVRQWSAGGPAYLYSFEYVGNLSKGSYFLPGLALTDNSNDMKVYENKMKGPAHGD 433
           LPA  + + WS   PA++YSFEY G  SKG  FL GL +       +   +K +   HGD
Sbjct: 467 LPAVLTTQVWSRLAPAFMYSFEYNGTKSKGINFLKGLPIVS-----ETAHDKPETVGHGD 521

Query: 434 ELAYIFEPLD 463
           E+ Y+F+  D
Sbjct: 522 EIGYMFDAND 531



 Score = 29.9 bits (64), Expect = 3.8
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = +3

Query: 195 LNAVDGLSQIVEATGDALFNFLRTRVFASGAQGVPLIYIALNTLGTLVKGHIFYLDLPLL 374
           LN    LS++VE+T D LFN          ++  P    +    GT  KG  F   LP++
Sbjct: 447 LNVDQVLSKVVESTTDVLFNLPAVLTTQVWSRLAPAFMYSFEYNGTKSKGINFLKGLPIV 506


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,876,934
Number of Sequences: 53049
Number of extensions: 687158
Number of successful extensions: 1658
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1656
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)