BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00439
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 24 1.7
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.0
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 5.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 5.3
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 5.3
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 7.0
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 9.2
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 9.2
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 9.2
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 9.2
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 9.2
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 9.2
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 9.2
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 9.2
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 9.2
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 9.2
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 9.2
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 9.2
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 9.2
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 9.2
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 9.2
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 9.2
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 9.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 9.2
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 578 CIVLFSIKAVREFGNEIYKVVPNL 507
CIV S VR GN + ++P+L
Sbjct: 215 CIVFGSDMIVRSIGNSLMVILPDL 238
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.4 bits (48), Expect = 2.3
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +2
Query: 170 LWIGLQYNFKRSRWSISN 223
LW+ L++N RW++S+
Sbjct: 74 LWLKLEWNDVNMRWNVSD 91
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 558 NGEENNTKTNLMGLQPYSE 614
+GEE + L GL+PY++
Sbjct: 1064 DGEEGGAELRLTGLRPYTK 1082
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 558 NGEENNTKTNLMGLQPYSE 614
+GEE + L GL+PY++
Sbjct: 1060 DGEEGGAELRLTGLRPYTK 1078
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 527 YKVVPNLASLSDTAPLID 474
Y V PNL+ LSD ID
Sbjct: 265 YYVTPNLSKLSDPEVWID 282
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2
Query: 527 YKVVPNLASLSDTAPLID 474
Y V PNL+ LSD ID
Sbjct: 318 YYVTPNLSKLSDPEVWID 335
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = +2
Query: 416 GPAHGDELAYIF-EPLD 463
G HGDE+ Y+F PL+
Sbjct: 493 GVLHGDEVEYVFGHPLN 509
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 399 YTFISFELSVRASPGRKY 346
Y F+ F R+ GRKY
Sbjct: 476 YAFVPFSAGPRSCVGRKY 493
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 116 VPVYYGNFPPRPMGSWISIQE 136
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 116 VPVYYGNFPPRPMGSWISIQE 136
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 116 VPVYYGNFPPRPMGSWISIQE 136
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 116 VPVYYGNFPPRPMGSWISIQE 136
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 116 VPVYYGNFPPRPMGSWISIQE 136
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 116 VPVYYGNFPPRPMGSWISIQE 136
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 127 VPIYCGNFPPRPLGPWISIQE 147
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 127 VPIYCGNFPPRPLGPWISIQE 147
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 127 VPIYCGNFPPRPLGPWISIQE 147
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 127 VPIYCGNFPPRPLGPWISIQE 147
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 119 VPVYYGNFPPRSMGPWISIQE 139
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 119 VPVYYGNFPPRSMGPWISIQE 139
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 119 VPVYYGNFPPRSMGPWISIQE 139
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 124 VPVYCGNFPPRPMGPWISIQE 144
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 261 RTRVFASGAQGVPLIYIA 314
R+ AS A G PL Y+A
Sbjct: 132 RSSALASKATGYPLAYVA 149
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 338 IPIYCGNFPPRPMGPWISIQE 358
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 349 IPIYCGNFPPRPMGPWISIQE 369
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 349 IPIYCGNFPPRPMGPWISIQE 369
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 338 IPIYCGNFPPRPMGPWISIQE 358
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 350 VPVYCGNFPPRPMGPWISIQE 370
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 9.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +3
Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
+P Y + P+ + W SI++
Sbjct: 352 VPVYYGNFPPRSMGPWISIQE 372
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,386
Number of Sequences: 438
Number of extensions: 4770
Number of successful extensions: 55
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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