SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00439
         (741 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    24   1.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   2.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.0  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   5.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   5.3  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   5.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   7.0  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   9.2  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   9.2  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   9.2  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   9.2  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   9.2  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   9.2  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    21   9.2  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    21   9.2  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    21   9.2  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    21   9.2  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   9.2  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   9.2  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   9.2  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   9.2  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   9.2  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    21   9.2  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    21   9.2  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   9.2  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    21   9.2  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    21   9.2  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   9.2  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 578 CIVLFSIKAVREFGNEIYKVVPNL 507
           CIV  S   VR  GN +  ++P+L
Sbjct: 215 CIVFGSDMIVRSIGNSLMVILPDL 238


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 170 LWIGLQYNFKRSRWSISN 223
           LW+ L++N    RW++S+
Sbjct: 74  LWLKLEWNDVNMRWNVSD 91


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 558  NGEENNTKTNLMGLQPYSE 614
            +GEE   +  L GL+PY++
Sbjct: 1064 DGEEGGAELRLTGLRPYTK 1082


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 558  NGEENNTKTNLMGLQPYSE 614
            +GEE   +  L GL+PY++
Sbjct: 1060 DGEEGGAELRLTGLRPYTK 1078


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 527 YKVVPNLASLSDTAPLID 474
           Y V PNL+ LSD    ID
Sbjct: 265 YYVTPNLSKLSDPEVWID 282


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 527 YKVVPNLASLSDTAPLID 474
           Y V PNL+ LSD    ID
Sbjct: 318 YYVTPNLSKLSDPEVWID 335


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/17 (52%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = +2

Query: 416 GPAHGDELAYIF-EPLD 463
           G  HGDE+ Y+F  PL+
Sbjct: 493 GVLHGDEVEYVFGHPLN 509


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 399 YTFISFELSVRASPGRKY 346
           Y F+ F    R+  GRKY
Sbjct: 476 YAFVPFSAGPRSCVGRKY 493


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 116 VPVYYGNFPPRPMGSWISIQE 136


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 116 VPVYYGNFPPRPMGSWISIQE 136


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 116 VPVYYGNFPPRPMGSWISIQE 136


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 116 VPVYYGNFPPRPMGSWISIQE 136


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 116 VPVYYGNFPPRPMGSWISIQE 136


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 116 VPVYYGNFPPRPMGSWISIQE 136


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 127 VPIYCGNFPPRPLGPWISIQE 147


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 127 VPIYCGNFPPRPLGPWISIQE 147


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 127 VPIYCGNFPPRPLGPWISIQE 147


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 127 VPIYCGNFPPRPLGPWISIQE 147


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 119 VPVYYGNFPPRSMGPWISIQE 139


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 119 VPVYYGNFPPRSMGPWISIQE 139


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 119 VPVYYGNFPPRSMGPWISIQE 139


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 124 VPVYCGNFPPRPMGPWISIQE 144


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 261 RTRVFASGAQGVPLIYIA 314
           R+   AS A G PL Y+A
Sbjct: 132 RSSALASKATGYPLAYVA 149


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 338 IPIYCGNFPPRPMGPWISIQE 358


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 349 IPIYCGNFPPRPMGPWISIQE 369


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 349 IPIYCGNFPPRPMGPWISIQE 369


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 338 IPIYCGNFPPRPMGPWISIQE 358


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 350 VPVYCGNFPPRPMGPWISIQE 370


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 438 LPTYSNRWTPKKINEWCSIRQ 500
           +P Y   + P+ +  W SI++
Sbjct: 352 VPVYYGNFPPRSMGPWISIQE 372


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,386
Number of Sequences: 438
Number of extensions: 4770
Number of successful extensions: 55
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -