Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00437
(731 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 38 8e-05
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 3.4
AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxida... 22 4.4
AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxida... 22 4.4
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 22 4.4
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 22 5.9
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 7.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 7.8
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 37.9 bits (84), Expect = 8e-05
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +2
Query: 5 CEVDGYPQPENVYWSKDGVRIAS------GDNIWISGTSVSRLTIRRVTVGDSGVYVCHA 166
C G P PE + W G R+++ G + ++G VS L I + D G+Y C A
Sbjct: 435 CIASGNPTPE-ITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTNDGGLYRCVA 493
Query: 167 DNLYSSHESSVQVTVKAL 220
+ S + S ++ V L
Sbjct: 494 SSKVGSADHSARINVYGL 511
Score = 29.9 bits (64), Expect = 0.022
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +2
Query: 5 CEVDGYPQPENVYWSKDGVRIASGDNIWISGTSVS----RLTIRRVTVGDSGVYVCHADN 172
C+ DG+P+P + GV + + + LTI + + G Y+C A N
Sbjct: 720 CKADGFPRPVVTWKRATGVSPGDYKDFKPNNPDIKVEDGTLTINNIQKTNEGYYLCEAVN 779
Query: 173 LYSSHESSV-QVTVKA 217
S S+V Q++V+A
Sbjct: 780 GIGSGLSAVIQISVQA 795
Score = 29.5 bits (63), Expect = 0.029
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +2
Query: 5 CEVDGYPQPENVYWSK--DGVR----IASGDNI-WISGTSVSRLTIRRVTVGDSGVYVCH 163
C G+P P + W K +G + D + ++GT L IR V DSG Y+C
Sbjct: 254 CPAQGFPSP-SFRWYKFVEGTTRKQAVTLNDRVKQVAGT----LIIREAKVEDSGKYLCV 308
Query: 164 ADNLYSSHESSVQVTVKALTTPAKCTDNP 250
+N S SV+ TV +T P K P
Sbjct: 309 VNN--SVGGESVE-TVLTVTAPLKAKIEP 334
Score = 23.4 bits (48), Expect = 1.9
Identities = 18/67 (26%), Positives = 28/67 (41%)
Frame = +2
Query: 5 CEVDGYPQPENVYWSKDGVRIASGDNIWISGTSVSRLTIRRVTVGDSGVYVCHADNLYSS 184
C +G P + + W KDG I + + L I V D G+Y C N S
Sbjct: 349 CNFEGNPI-KTISWLKDGHPIDHNEAV---------LRIESVRKEDKGMYQCFIRNDQES 398
Query: 185 HESSVQV 205
E++ ++
Sbjct: 399 AEATAEL 405
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.6 bits (46), Expect = 3.4
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +1
Query: 289 CKHHYYSNFCCKSC 330
CK Y CCK+C
Sbjct: 788 CKRIYNEKQCCKNC 801
>AY884064-1|AAX84205.1| 683|Tribolium castaneum pro-phenol oxidase
subunit 2 protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 51 LDQYTFSGCGYP 16
L Q+ F GCG+P
Sbjct: 572 LAQFNFCGCGWP 583
>AY884063-1|AAX84204.1| 682|Tribolium castaneum pro-phenol oxidase
subunit 1 protein.
Length = 682
Score = 22.2 bits (45), Expect = 4.4
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 54 SLDQYTFSGCGYP 16
+L ++ F GCG+P
Sbjct: 570 ALSEFNFCGCGWP 582
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 22.2 bits (45), Expect = 4.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 416 NSPKNYFLLVKAASFC 369
N ++YF L KA SFC
Sbjct: 29 NHRESYFRLSKAKSFC 44
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 167 RRGTRTLRYLRPSLGVSSDGKH*FHLSICCL 75
+R R+ YL +L ++ + + L++CCL
Sbjct: 33 KRMMRSWYYLLTNLTYNNTNRKYYWLNVCCL 63
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 589 MYNSFKITQFMALNNKIVPSK*SHRS 512
MY++F I Q +ALN + + ++RS
Sbjct: 487 MYDAFLIDQSLALNRRRDENPRNYRS 512
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 589 MYNSFKITQFMALNNKIVPSK*SHRS 512
MY++F I Q +ALN + + ++RS
Sbjct: 487 MYDAFLIDQSLALNRRRDENPRNYRS 512
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,873
Number of Sequences: 336
Number of extensions: 3378
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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