Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00435X
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    27   0.12 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    25   0.64 
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   3.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   5.9  

>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 488 RHFFKKNYINYYNTCIVLFRYS 423
           RHFFKKN I     C+VL  Y+
Sbjct: 41  RHFFKKNLIVGSENCLVLNVYT 62


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 24.6 bits (51), Expect = 0.64
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 503 IIAIIRHFFKKNYINYYNTCIVLFRYSCFYW*WS 402
           I+  I H F+K  +NY ++ I L   + F+  W+
Sbjct: 88  IVVNIVHVFRKRRVNYKDSNIGLVVANAFFLLWT 121


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 237 YGRRISDPLN 208
           +GRRI+DP+N
Sbjct: 140 FGRRITDPIN 149


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 212 NGSLIRLPYNIEKYSLAIHA 271
           NG+L+  P+  E Y   +HA
Sbjct: 77  NGNLVFPPFRAEDYRQEVHA 96


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = -3

Query: 434 FRYSCFYW*WSIL*TRAIKYQ*HHCSADFC*EIL 333
           ++  C+Y  WS    +  K+   H   D C  I+
Sbjct: 87  YKVVCYYTNWSQYRVKIGKFTPEHIIPDLCTHII 120


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +3

Query: 444 TCVXXXXXXFFKKVSNNCYDFILDWVIIF 530
           TC       F ++  +NC DF +  ++ F
Sbjct: 54  TCELKLWWEFCQRNGHNCLDFTVQNILTF 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,840
Number of Sequences: 336
Number of extensions: 3083
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)