Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00434
(832 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 65 8e-11
SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9) 36 0.040
SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26) 31 0.87
SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05) 30 2.0
SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 30 2.6
SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0) 30 2.6
SB_29288| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_23595| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7) 29 6.1
SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05) 29 6.1
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 28 8.1
SB_45705| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21) 28 8.1
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 64.9 bits (151), Expect = 8e-11
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +2
Query: 257 SSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIE 436
+S+LKH E QEKNPLP KD I E + + ++ FD +KLKH +T EKN LP I
Sbjct: 688 ASKLKHVEVQEKNPLPTKDDITTESTETR--AEVKTFDHSKLKHVQTEEKNPLPDAKTIA 745
Query: 437 QEKSA 451
QEK++
Sbjct: 746 QEKAS 750
Score = 63.7 bits (148), Expect = 2e-10
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Frame = +2
Query: 257 SSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIE--NFDPTKLKHTETCEKNSLPTKDV 430
++ LKH +T+EKN LP + I+ E + ++F + E +F+ +KL+H ET EKN+LPTKD
Sbjct: 419 AANLKHVQTKEKNTLPSDETIKQELQPDEFPDRAEVKSFEKSKLQHVETKEKNTLPTKDT 478
Query: 431 IEQEK 445
I EK
Sbjct: 479 IADEK 483
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/68 (52%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +2
Query: 248 EVYS-SQLKHTETQEKNPLPDKDAIEAEK--EKNKFLNGIENFDPTKLKHTETCEKNSLP 418
EV+ ++LKH ET EKNPLPD I AE E + + FD +KLKH ET EK +P
Sbjct: 492 EVFQKNKLKHVETLEKNPLPDAQNIRAEMMPEVLPDRSEVAKFDTSKLKHVETKEKVVMP 551
Query: 419 TKDVIEQE 442
TKDVIE E
Sbjct: 552 TKDVIEAE 559
Score = 62.1 bits (144), Expect = 5e-10
Identities = 32/61 (52%), Positives = 37/61 (60%)
Frame = +2
Query: 260 SQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIEQ 439
S+L+H ET+EKN LP KD I EK F +G+E F KLKH ET EKN LP I
Sbjct: 460 SKLQHVETKEKNTLPTKDTIADEKRTAPF-SGVEVFQKNKLKHVETLEKNPLPDAQNIRA 518
Query: 440 E 442
E
Sbjct: 519 E 519
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +2
Query: 260 SQLKHTETQEKNPLPDKDAIEAEKEKNKF--LNGIENFDPTKLKHTETCEKNSLPTKDVI 433
S+LKH ET EKNPLP ++ E ++ + +FD +KLKH E EKN LPTKD I
Sbjct: 649 SKLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVASFDASKLKHVEVQEKNPLPTKDDI 708
Query: 434 EQEKS 448
E +
Sbjct: 709 TTEST 713
Score = 58.0 bits (134), Expect = 9e-09
Identities = 29/62 (46%), Positives = 41/62 (66%)
Frame = +2
Query: 257 SSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIE 436
+S+LKH ET+EK +P KD IEAE ++ +++FD +KLKH T EKN LPT +
Sbjct: 536 TSKLKHVETKEKVVMPTKDVIEAEAIDSRA--EVKSFDHSKLKHVVTQEKNPLPTPQTLH 593
Query: 437 QE 442
+E
Sbjct: 594 EE 595
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Frame = +2
Query: 260 SQLKHTETQEKNPLPDKDAIEAEK-EKNK-FLNGIENFDPTKLKHTETCEKNSLPTKDVI 433
S+LKH TQEKNPLP + E KNK + + +FD TKLKH T EK+ +P+++ I
Sbjct: 573 SKLKHVVTQEKNPLPTPQTLHEELIPKNKPDRSEVASFDHTKLKHVTTQEKSIMPSQEDI 632
Query: 434 EQE 442
++E
Sbjct: 633 KEE 635
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +2
Query: 260 SQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIEQ 439
++LKH TQEK+ +P ++ I+ E ++ +++FD +KLKH ET EKN LP+ V+++
Sbjct: 613 TKLKHVTTQEKSIMPSQEDIKEEAVDSRA--EVKSFDHSKLKHVETVEKNPLPSAAVLKE 670
Query: 440 E 442
E
Sbjct: 671 E 671
Score = 35.9 bits (79), Expect = 0.040
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 356 IENFDPTKLKHTETCEKNSLPTKDVIEQE 442
+ FD LKH +T EKN+LP+ + I+QE
Sbjct: 414 VAKFDAANLKHVQTKEKNTLPSDETIKQE 442
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/40 (37%), Positives = 28/40 (70%)
Frame = +3
Query: 96 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 215
+P+V D +S++ F+TS L+ V+T EK+V+P+ + + E
Sbjct: 521 MPEVLPD-RSEVAKFDTSKLKHVETKEKVVMPTKDVIEAE 559
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 96 LPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 215
+PK D +S++ F+ + L+ V T EK ++PS ED+ E
Sbjct: 597 IPKNKPD-RSEVASFDHTKLKHVTTQEKSIMPSQEDIKEE 635
>SB_45518| Best HMM Match : Prothymosin (HMM E-Value=0.9)
Length = 413
Score = 35.9 bits (79), Expect = 0.040
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 84 SLKDLPKVATDLKSQLEGFNTSCL-RDVDTNEKIVLPSAEDVATEKTQKSLFD 239
SLK L K+ TDL+S ++G ++ L ++V+ K+V + +T K + S F+
Sbjct: 333 SLKALAKICTDLESNIQGIKSNPLAKEVERTNKLVYEIFKKFSTSKVEASSFE 385
>SB_55925| Best HMM Match : Homeobox (HMM E-Value=1e-26)
Length = 1064
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +2
Query: 14 ESSIPFLIKNILIQNGLLRE*HSLPERPPQGRHRPEESARRLQHQ 148
E S+PF N QN ++ +P R PQG H + A+ +QH+
Sbjct: 224 EMSLPFKKHNTFRQNVDIK---GIPSRLPQGEHSDRKKAQEVQHK 265
>SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 30.7 bits (66), Expect = 1.5
Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = +1
Query: 154 SVTSTPMKRLCFRLLKTSPLRRPRSLYSTVS-RSLFE----PAEAHRDSGEEPASGQRRY 318
SVT T +RL R S L PRS+ T S R+L A R GEE G+ Y
Sbjct: 438 SVTGTFARRLVSRTTDASSLEDPRSVVVTSSPRTLGRISNGTTSARRVEGEEHVCGE--Y 495
Query: 319 RSGEGKEQIPERH 357
+ KE +P H
Sbjct: 496 KCSLCKEVVPPDH 508
>SB_58909| Best HMM Match : Renin_r (HMM E-Value=1.6e-05)
Length = 385
Score = 30.3 bits (65), Expect = 2.0
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = -3
Query: 221 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFELTLQVCGDLGEVFQGGS 78
GLL+GD+F R K N+ I VD T G + FEL + + E+ GS
Sbjct: 74 GLLAGDIFRRPKANILISVDGV-TKG-DKFELPAKASFPVQEMAGLGS 119
>SB_14886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1028
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +1
Query: 409 LAPHKGRH*AREISLNHYFITVTRKCISLVSPYLILM*VRSICVVHYKFYFCFCTMATLP 588
L+P + R +S F T +SL S ++ +R IC VH FY+C C +++
Sbjct: 22 LSPQRARQVFSLLS-RQPFRLATHVILSLESRDTLVAVLR-ICSVHLDFYYCTCVWSSMA 79
Query: 589 G 591
G
Sbjct: 80 G 80
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 66 SVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDV-DTNEKIVLPSAEDVAT 212
S SD P+ D A+D+KS + T DV T++ V PSA DV T
Sbjct: 617 SASDVPTTSDDQPSASDVKSTSDDQVTPPSSDVPTTSDDQVTPSASDVPT 666
>SB_20129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 90
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -3
Query: 221 GLLSGDVFSRRKHNLFIGVDVTETAGVEAFEL 126
GLL+GD+F R K N+ I VD T G + FEL
Sbjct: 51 GLLAGDIFRRPKANILISVDGV-TKG-DKFEL 80
>SB_19734| Best HMM Match : RNA_pol_Rpb1_5 (HMM E-Value=0)
Length = 1452
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +2
Query: 263 QLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIEQE 442
Q K E PD+D +E E+E NG+E+ D K + + PT DV Q+
Sbjct: 843 QRKRLEQHASYEAPDEDEMEIERE---LQNGLESGDEDDTKADAQRSETNSPTLDVETQQ 899
>SB_29288| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +2
Query: 269 KHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSL 415
+HTE + +P P K I+ E +++ + I+ KH+ +CE+ +
Sbjct: 212 RHTENAKSSPDPIKSEIDGEHSEDEKEHKIKVCPLVDKKHSHSCERTHI 260
>SB_44787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.7 bits (61), Expect = 6.1
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +1
Query: 91 KTSPRSPQT*RVSSKAS-----TPAVSVTSTPMKRLCFRLLKTSPLRRPRSLYSTVSRSL 255
+++P SP SS S +P SV + +K + +KT+P R + TVS L
Sbjct: 383 ESNPASPTGSTSSSDGSVYNPCSPDSSVLTNILKHPSGKEIKTTPYSRKNTKSDTVSPKL 442
Query: 256 FEPAEAHRDSGEEPASGQRRYRSGEGKEQ 342
PA+ R + RYR + EQ
Sbjct: 443 KTPAQRQRKRVQN-KDAATRYRVKKKDEQ 470
>SB_23595| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 293 NPLPDKDAIEAEKEKNK---FLNGIENFDPTKLKHTETCEKNSLPTKDVIEQ 439
N LPD + E+++ K ++G + + K CE NSLP K ++Q
Sbjct: 171 NNLPDSTCTQKERQRLKSERVVHGEAKHEQDQGKCPNNCEGNSLPQKAYVKQ 222
>SB_19898| Best HMM Match : Merozoite_SPAM (HMM E-Value=3.7)
Length = 446
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +2
Query: 215 EDPEVFIRRYREVYSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHT- 391
E VF +R R + + TET+E NP D +AE+ + G + T+ K T
Sbjct: 274 EGKSVF-KRNRPTEPASVPSTETKEANPNVTADTKQAEQNEGSMSEGTTSKTITENKTTN 332
Query: 392 -ETCEKNSL 415
ET K L
Sbjct: 333 METLRKEML 341
>SB_7539| Best HMM Match : Sulfatase (HMM E-Value=3.5e-05)
Length = 492
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 216 SQWRRLQQTEAQSFHWCRRHGDSWC*SLRADSSGLWRPW 100
S WRRLQ+ A S + + D +L A+ G W PW
Sbjct: 419 SLWRRLQELNATSLEYRLQPEDPRSIAL-AERLGRWEPW 456
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 87 LKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATE 215
L DL +V +LKS+ EG CL D++ + DV E
Sbjct: 1125 LMDLSRVGEELKSENEGLQQKCL-DLEKQRDTIKQDLADVQKE 1166
>SB_45705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 449
Score = 28.3 bits (60), Expect = 8.1
Identities = 26/73 (35%), Positives = 33/73 (45%)
Frame = +2
Query: 215 EDPEVFIRRYREVYSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTE 394
E +V RRY E L TQ N + D+ IEAE+ KNK PT T
Sbjct: 82 ESWDVLARRYVE----DLHAKATQLANNVTDQQWIEAEEAKNKVYEEAVQVIPTGTNVT- 136
Query: 395 TCEKNSLPTKDVI 433
TC +SL ++I
Sbjct: 137 TC--HSLDNANII 147
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/68 (30%), Positives = 26/68 (38%)
Frame = +1
Query: 205 SPLRRPRSLYSTVSRSLFEPAEAHRDSGEEPASGQRRYRSGEGKEQIPERHRELRSH*AE 384
SP RR RS R P+ HR S R R + RHR RSH E
Sbjct: 230 SPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRHSRSRSPTHRRHRS-RSHSPE 288
Query: 385 AHGNVREE 408
+ ++E
Sbjct: 289 KKKHKKKE 296
>SB_5478| Best HMM Match : NDT80_PhoG (HMM E-Value=3.6e-21)
Length = 781
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 31 PHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTP 171
P + + E P P + L P T+ P+ V +ASTP S +P
Sbjct: 517 PRNSFAEYEKPLPTLPLSPTNTTTGRPRLSTVPPEASTPTDSFPKSP 563
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,380,239
Number of Sequences: 59808
Number of extensions: 533981
Number of successful extensions: 1638
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1627
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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