Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00434
         (832 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026213-7|AAB71308.2|  151|Caenorhabditis elegans Tetra thymosi...    56   3e-08
AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical ...    31   1.0  
AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical...    29   5.4  
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AF022981-2|AAG24200.1|  236|Caenorhabditis elegans Hypothetical ...    28   7.1  
AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical ...    28   7.1  
AL132948-19|CAD31820.1|  395|Caenorhabditis elegans Hypothetical...    28   9.4  

>AF026213-7|AAB71308.2|  151|Caenorhabditis elegans Tetra thymosin
           (four thymosin repeatprotein) protein 1 protein.
          Length = 151

 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 29/61 (47%), Positives = 39/61 (63%)
 Frame = +2

Query: 263 QLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIEQE 442
           +LK  ET EKN LP K+ +  EK+  + ++ IE+FD TKL  T   EK  LP+ D I+QE
Sbjct: 23  ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIKQE 82

Query: 443 K 445
           K
Sbjct: 83  K 83



 Score = 49.6 bits (113), Expect = 3e-06
 Identities = 26/64 (40%), Positives = 37/64 (57%)
 Frame = +2

Query: 257 SSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTKLKHTETCEKNSLPTKDVIE 436
           S++L  T  +EK  LP  D I+ EK+  +  + I NF    LK TET EKN LP+   + 
Sbjct: 59  STKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVA 118

Query: 437 QEKS 448
           +EK+
Sbjct: 119 REKT 122



 Score = 38.3 bits (85), Expect = 0.007
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = +3

Query: 126 QLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKF 254
           ++E F+++ L      EKIVLPSA+D+  EK    L D I  F
Sbjct: 53  EIEHFDSTKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNF 95



 Score = 35.9 bits (79), Expect = 0.036
 Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +3

Query: 84  SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKF 254
           ++ +LPK+  +L   + EG     L+ V+T EK VLP+ EDVA EK        IE F
Sbjct: 3   AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHF 57



 Score = 33.9 bits (74), Expect = 0.14
 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 81  PSLKDLP--KVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKT 221
           PS  D+   K   +L  ++  F +  L+  +T EK VLPS  DVA EKT
Sbjct: 74  PSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKT 122


>AL132949-7|CAB61080.1| 1168|Caenorhabditis elegans Hypothetical
           protein Y53F4B.9 protein.
          Length = 1168

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +1

Query: 127 SSKASTPAVSVTSTPMKRLCFRLL--KTSPLRRPRSLYSTVSRSLFEPAEAHRDSGEEPA 300
           SS AS  A SVT T ++ +  + +  KT P  R +SL    +  L  PA+  +   EEP 
Sbjct: 251 SSIASYSAESVTETALESVNTKSVESKTRPSSRRKSLILGAASPLKSPAKIEKPRLEEPE 310

Query: 301 SGQRRYR 321
              +R R
Sbjct: 311 QKSKRSR 317


>AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical
           protein Y62E10A.16 protein.
          Length = 496

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 445 ISLNHYFITVTRKCISLVSPYLILM*VRSICVVHYKFYFC 564
           + +N Y + + R C++  +PY + +  +S  V+HY+   C
Sbjct: 374 LHVNDYSVCIKRNCLNQKAPYSVNL--KSKHVLHYRLVIC 411


>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
            W06A7.3f protein.
          Length = 2488

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = +2

Query: 224  EVFIRRYREVYSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTK--LKHTET 397
            EV     +E    QL+  + Q+K  + + +  + E    K ++ +EN  P +  L    T
Sbjct: 1181 EVSAEPDQESAEFQLEAKKDQDKETIENSEDAKKETVMEKLVSLVENILPVEAVLPSDST 1240

Query: 398  CEKNSLPTKDVIEQEKSA 451
              KNS   K++  QE S+
Sbjct: 1241 VTKNSEDKKELETQELSS 1258


>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
            W06A7.3c protein.
          Length = 2484

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = +2

Query: 224  EVFIRRYREVYSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTK--LKHTET 397
            EV     +E    QL+  + Q+K  + + +  + E    K ++ +EN  P +  L    T
Sbjct: 1181 EVSAEPDQESAEFQLEAKKDQDKETIENSEDAKKETVMEKLVSLVENILPVEAVLPSDST 1240

Query: 398  CEKNSLPTKDVIEQEKSA 451
              KNS   K++  QE S+
Sbjct: 1241 VTKNSEDKKELETQELSS 1258


>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
            W06A7.3a protein.
          Length = 2607

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = +2

Query: 224  EVFIRRYREVYSSQLKHTETQEKNPLPDKDAIEAEKEKNKFLNGIENFDPTK--LKHTET 397
            EV     +E    QL+  + Q+K  + + +  + E    K ++ +EN  P +  L    T
Sbjct: 1181 EVSAEPDQESAEFQLEAKKDQDKETIENSEDAKKETVMEKLVSLVENILPVEAVLPSDST 1240

Query: 398  CEKNSLPTKDVIEQEKSA 451
              KNS   K++  QE S+
Sbjct: 1241 VTKNSEDKKELETQELSS 1258


>AF022981-2|AAG24200.1|  236|Caenorhabditis elegans Hypothetical
           protein W03F9.2a protein.
          Length = 236

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +2

Query: 269 KHTETQEKNPLPDKDAIEAEKEKNKFLNGIE--NFD 370
           KHTET+++ P  +K    A+K  N  L  +E  N+D
Sbjct: 192 KHTETEKEAPPQEKSVTNAQKPGNPALLSLESRNYD 227


>AC024819-3|AAF59587.2|  923|Caenorhabditis elegans Hypothetical
           protein Y55B1AL.3a protein.
          Length = 923

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +1

Query: 19  FYPLPHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLL 198
           F P+P    + +   +     P   TSP+SP +   S++   P VSVTS P ++      
Sbjct: 19  FSPIPKFSRLRTPRTSREYVCPLKSTSPQSPSS---STENEPPPVSVTSPPARKRALEES 75

Query: 199 KTSPLRR 219
             +P+++
Sbjct: 76  TVTPIQQ 82


>AL132948-19|CAD31820.1|  395|Caenorhabditis elegans Hypothetical
           protein Y39B6A.23 protein.
          Length = 395

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +3

Query: 504 VFNIDVSQIDLRRPLQVLFLFLYNGNTAWAMAAYSNPGF 620
           VF I   Q  ++    +L L L NG    AM +YSN GF
Sbjct: 323 VFTIGGMQYPVKSIEYILDLGLGNGRCVLAMLSYSNTGF 361


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,096,890
Number of Sequences: 27780
Number of extensions: 392679
Number of successful extensions: 1268
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)