Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00433X
         (469 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    24   0.61 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   2.5  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       21   7.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   9.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   9.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.9  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 24.2 bits (50), Expect = 0.61
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 388 KPVTTHPVAAVTSGAPAPSR 447
           K V+ H +  +TSG P P++
Sbjct: 39  KHVSPHVIGGITSGGPIPTK 58


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 107 KNFSEEVGTMREQEGDGPE 163
           KNF++   + R  E DGPE
Sbjct: 415 KNFNDSPESNRSNEIDGPE 433


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 376 HQPLKPVTTHPVAAVTSGAPAP 441
           HQ   PV +  +A   SGA AP
Sbjct: 71  HQSDDPVLSQIIANKQSGAAAP 92


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 323 WRLLGELTCHPQR 361
           WR  GE  C P R
Sbjct: 514 WRETGEAACDPYR 526


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 46   RTSSERSQKTPSSRSEVEINEELQRGSGDDEG 141
            +   E S      +  VEI ++LQ+  G D+G
Sbjct: 1368 KKKEELSPNALLDKQAVEIVKQLQKLQGIDDG 1399


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 46   RTSSERSQKTPSSRSEVEINEELQRGSGDDEG 141
            +   E S      +  VEI ++LQ+  G D+G
Sbjct: 1368 KKKEELSPNALLDKQAVEIVKQLQKLQGIDDG 1399


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 46   RTSSERSQKTPSSRSEVEINEELQRGSGDDEG 141
            +   E S      +  VEI ++LQ+  G D+G
Sbjct: 1368 KKKEELSPNALLDKQAVEIVKQLQKLQGIDDG 1399


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 46   RTSSERSQKTPSSRSEVEINEELQRGSGDDEG 141
            +   E S      +  VEI ++LQ+  G D+G
Sbjct: 1368 KKKEELSPNALLDKQAVEIVKQLQKLQGIDDG 1399


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,892
Number of Sequences: 336
Number of extensions: 1250
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)