Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00433X
(469 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982 31 0.46
01_07_0082 - 40965947-40967023 31 0.61
09_03_0209 + 13505900-13506277,13507296-13508063,13508412-13509131 29 1.9
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 29 1.9
03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352... 29 1.9
12_01_1068 - 11052769-11052943,11053103-11053182,11053304-110534... 28 3.3
06_01_0107 - 854756-854883,855126-856968 28 3.3
10_08_0830 - 20888051-20888779 28 4.3
08_02_0681 + 20013975-20014298,20014391-20014594,20014790-20014828 28 4.3
08_02_0021 + 11307795-11308093,11308454-11308556,11309623-113099... 28 4.3
07_03_0698 - 20765305-20768526 28 4.3
06_01_0041 + 403634-403817,404154-404332,404431-404536,404620-40... 28 4.3
02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486 28 4.3
01_06_0922 - 33022709-33023545 27 5.7
03_05_0292 + 22846273-22846377,22847161-22847823 27 7.5
01_01_0070 - 542603-542686,542803-543441 27 7.5
10_08_0595 - 19074594-19075063,19075582-19075851,19075963-19075999 27 10.0
09_04_0436 - 17558603-17559265,17559322-17559384 27 10.0
08_02_0998 - 23411422-23411649,23411897-23412625 27 10.0
07_03_1148 - 24363952-24365086,24365178-24365361,24365438-243654... 27 10.0
07_03_1107 - 24024387-24024497,24025799-24026410 27 10.0
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 27 10.0
05_03_0292 - 11803777-11803784,11803896-11804063,11804147-118042... 27 10.0
03_05_1102 - 30413154-30414062,30414519-30415010 27 10.0
02_01_0609 + 4558839-4559202,4559283-4559965 27 10.0
>01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982
Length = 301
Score = 31.1 bits (67), Expect = 0.46
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 331 PRRTHVSPAAAHAGAHQPLKPVTTHPVAAVTSGAPAPS 444
P +H A +H G + PVT P G+PAPS
Sbjct: 101 PSPSHGGAAPSHGGGYGASPPVTPSPGGGYGGGSPAPS 138
>01_07_0082 - 40965947-40967023
Length = 358
Score = 30.7 bits (66), Expect = 0.61
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +1
Query: 316 AYVEAPRRTHVSPAAAHAGAHQP---LKPVTTHPVAAVTSGAPAPSRP 450
AY +AP P+AA A A+ P P T +P AA G+ A + P
Sbjct: 150 AYGQAPPAPAYPPSAAAAAAYPPQSTYPPPTAYPTAAKADGSAAAAYP 197
>09_03_0209 + 13505900-13506277,13507296-13508063,13508412-13509131
Length = 621
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 260 ASPPYHCCGRALKPSASATPTWRLLG 337
AS PY C A PS SA P W G
Sbjct: 53 ASHPYPCAAFAFPPSWSAAPGWAAAG 78
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = +1
Query: 331 PRRTHVSPAAAHAGAHQPLKP---VTTHPVAAVTSGAPAPSRP 450
PR + P A PL P TT P A V + AP P+ P
Sbjct: 86 PRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPVPAAAPPPTAP 128
>03_01_0458 -
3521938-3522024,3522133-3522213,3522673-3522806,
3523189-3523270,3523420-3523692,3523953-3524162,
3524252-3524337,3525197-3525289,3526003-3526227,
3526320-3526930,3529328-3529395,3529491-3529679,
3529773-3529901,3530013-3532484
Length = 1579
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 330 SSANSRVTRSGTRG-RAPTSQAGDDASGCRGDKRRAGALQA 449
+SA+S ++S + G AP+S SG R D+R+ G+ +A
Sbjct: 269 TSASSSTSQSQSPGDEAPSSSCQSSVSGHRADRRKGGSRKA 309
>12_01_1068 -
11052769-11052943,11053103-11053182,11053304-11053401,
11053487-11053627,11053701-11053841,11053933-11054017,
11055296-11055826,11055926-11055940
Length = 421
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +1
Query: 352 PAAAHAGAHQPLKPVTTHPVAAVTSGAPAPSR 447
PAAA A A Q + P+ AV + +PAPSR
Sbjct: 123 PAAAVASAPQACTVSSAPPLRAVETRSPAPSR 154
>06_01_0107 - 854756-854883,855126-856968
Length = 656
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 328 APRRTHVSPAAAHAGAHQPLKPVTTHPVAAVT 423
APRR +VSP A P +PV+T PV T
Sbjct: 576 APRR-YVSPTRYTGAAGIPYRPVSTEPVLRTT 606
>10_08_0830 - 20888051-20888779
Length = 242
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +1
Query: 370 GAHQPLKPVTTHPVAAVTSGAPAP 441
G HQP + TT PV AV AP P
Sbjct: 146 GFHQPHRNETTLPVRAVARSAPFP 169
>08_02_0681 + 20013975-20014298,20014391-20014594,20014790-20014828
Length = 188
Score = 27.9 bits (59), Expect = 4.3
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +2
Query: 251 SARASPPYHCCGRALKPSASATPTWRLLGELTCHPQRHTRAR 376
+A+ S AL P AS TWRLLG P+R RAR
Sbjct: 70 AAKVSVASFLATAALAPFASPVVTWRLLG----RPRRGGRAR 107
>08_02_0021 +
11307795-11308093,11308454-11308556,11309623-11309931,
11310190-11310618
Length = 379
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 110 NFSEEVGTMREQEGDGPESR*PDSMDE 190
+FSE+VG + E E + P R PD +DE
Sbjct: 331 SFSEDVG-INEDEEENPPDRIPDMVDE 356
>07_03_0698 - 20765305-20768526
Length = 1073
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3
Query: 45 PHEFGTVTKNAVVEIRSRNQRRTSARKWGR*GNRKATARRAVSRTRW 185
P E T + +R RNQRRT+A W +RRA+ W
Sbjct: 134 PVEVTTTMEPRDASVRPRNQRRTNAGSWNN------PSRRAILEDGW 174
>06_01_0041 +
403634-403817,404154-404332,404431-404536,404620-404936,
405231-405605,406199-406283,406570-408066,408575-408738
Length = 968
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 322 VEAPRRTHVSPAAAHAGAHQPLKPVTTHPVAAVTSGAPAPSRPI 453
+ APR HV PAA H Q + P + G P PS+P+
Sbjct: 840 LHAPRAPHVDPAAHHL-MMQHISTPGNFPPEGLQRGVP-PSQPV 881
>02_02_0525 - 11182043-11182080,11182386-11182511,11182760-11183486
Length = 296
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 263 SPPYHCCGRALKPSASATPTWR-LLGELTCHPQRHTRART 379
+PP CGR +W+ L G + CHP+RH R T
Sbjct: 65 APPCTECGRQFL-------SWKALFGHMRCHPERHWRGIT 97
>01_06_0922 - 33022709-33023545
Length = 278
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 439 APARRLSPRQPDASSPA*EVGARPRVPLR 353
+PA + +P Q A+SPA + +P VP+R
Sbjct: 184 SPAAKRTPEQRRAASPAPSLQRKPPVPVR 212
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 360 GTRGRAPTSQAGDDASGCRGD 422
G RGR ++Q G DA GC +
Sbjct: 182 GRRGRGSSTQGGGDACGCMAE 202
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 27.1 bits (57), Expect = 7.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 343 HVSPAAAHAGAHQPLKPVTTHPVAAVTSGAPAPSRP 450
H++ AAA + A P +P T A PAP+ P
Sbjct: 20 HLALAAAQSPAAAPAQPTPTPVPTAPAKSPPAPATP 55
>10_08_0595 - 19074594-19075063,19075582-19075851,19075963-19075999
Length = 258
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 334 RRTHVSPAAAHAGAHQPLKPVTTHPVAAVTSGAP 435
RR H+ A A AGA L+P + P A+V + P
Sbjct: 54 RRPHLDVADAGAGAAAVLRPPRSSPSASVGASWP 87
>09_04_0436 - 17558603-17559265,17559322-17559384
Length = 241
Score = 26.6 bits (56), Expect = 10.0
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 254 ARASPPYHCCGRALKPSASATPTWRLLGELTCHP-QRHTRARTN 382
A ASP P+ASATPT L T P QRH +R +
Sbjct: 158 ASASPSTTSSSATPPPNASATPTPSLSWRTTPPPCQRHPSSRAS 201
>08_02_0998 - 23411422-23411649,23411897-23412625
Length = 318
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 337 RTHVSPAAAHAGAHQPLKPVTTHPVAAVTSGAPAPSRPIL 456
R H +P A A AH ++ V HPV+A G P L
Sbjct: 115 RAHDAPQAPEALAHGGVQVVGGHPVSAEEVGVDHDEAPDL 154
>07_03_1148 -
24363952-24365086,24365178-24365361,24365438-24365474,
24365585-24365818
Length = 529
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 443 EGAGAPLVTAATGCVVTGLRGWCAPACAA 357
+G APL AA G + APACAA
Sbjct: 501 DGCAAPLRVAARGIAFVRFTEFKAPACAA 529
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 340 THVSPAAAHAGAHQPLKPVTTHPVAAVTSGAPAPSRP 450
T PAA+ A P P T P A T+ AP + P
Sbjct: 52 TTTPPAASTPPAAAPTTPATPAPAEAPTTPAPTKAPP 88
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = +1
Query: 367 AGAHQPLKPVTTHPVAAVTS--GAPAPSR 447
AG H P KP+ T P+ V S PAP +
Sbjct: 313 AGPHHPPKPLQTGPMQGVASLPSQPAPKQ 341
>05_03_0292 -
11803777-11803784,11803896-11804063,11804147-11804296,
11804481-11804540,11804621-11804806,11805468-11805516
Length = 206
Score = 26.6 bits (56), Expect = 10.0
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 324 GGSSANSRVTRSGTRGRAPTSQAGDDASGCRGDKRRAGALQADSIV 461
GGSS + TRS G + D + G R D AG SIV
Sbjct: 5 GGSSVPTSSTRSAPFGDIKNASTEDQSVGGRLDVNDAGTENVGSIV 50
>03_05_1102 - 30413154-30414062,30414519-30415010
Length = 466
Score = 26.6 bits (56), Expect = 10.0
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 355 AAAHAGAHQPLKPVTTHPVAAVTSGAPAPSRPIL 456
AAAH P P P A S AP P P+L
Sbjct: 197 AAAHR-RDSPYPPFLHSPALAAKSAAPPPEHPLL 229
>02_01_0609 + 4558839-4559202,4559283-4559965
Length = 348
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 49 TSSERSQKTPSSRSEVEINEELQRGSGDDEG 141
+S+ R+ +P++ EVEI + LQ D+G
Sbjct: 225 SSAGRAASSPAANGEVEIKKPLQEEEWSDDG 255
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,890,873
Number of Sequences: 37544
Number of extensions: 193413
Number of successful extensions: 1120
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 943260316
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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