Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00433X
(469 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 25 1.00
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 25 1.00
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 25 1.00
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 25 1.7
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 24 2.3
AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein. 24 2.3
AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein. 24 2.3
AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein. 24 2.3
AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein. 24 2.3
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 5.3
AF043440-1|AAC05665.1| 234|Anopheles gambiae putative pupal-spe... 23 5.3
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 22 9.3
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 25.4 bits (53), Expect = 1.00
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 334 RRTHVSPAAAHAGAHQPLKPVTTHPVAAVTSGAPAP 441
R T +PA + + P TTH +AA TS P P
Sbjct: 304 RFTTRTPATSTEHRYTTRTPTTTHRLAARTSTPPDP 339
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 25.4 bits (53), Expect = 1.00
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 299 PSASATPTWRLLGELTCHPQRHTRARTNLSS 391
P + PT+ L+G++T H Q + R +L S
Sbjct: 715 PRTAYGPTYLLIGDITKHGQVRIQLRDHLGS 745
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 25.4 bits (53), Expect = 1.00
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 299 PSASATPTWRLLGELTCHPQRHTRARTNLSS 391
P + PT+ L+G++T H Q + R +L S
Sbjct: 716 PRTAYGPTYLLIGDITKHGQVRIQLRDHLGS 746
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 24.6 bits (51), Expect = 1.7
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 316 AYVEAPRRTHVSPAAAHAGAHQPLKPVTTHPVAAVTSGAPA 438
A + AP S AAA A A + AA+ +GAPA
Sbjct: 213 AAITAPAANAASTAAAPAAATAHAATASPVATAALAAGAPA 253
>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
Length = 1494
Score = 24.2 bits (50), Expect = 2.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +3
Query: 324 GGSSANSRVTRSGTRGRAPTSQAGDDASGCR 416
GGS + T GT+ R P++Q D R
Sbjct: 539 GGSPGATLATPGGTKARPPSAQQVDGRESVR 569
>AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 55 SERSQKTPSSRSEVEINEELQR 120
S+ S +TP S +++ NE LQR
Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175
>AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 55 SERSQKTPSSRSEVEINEELQR 120
S+ S +TP S +++ NE LQR
Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175
>AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 55 SERSQKTPSSRSEVEINEELQR 120
S+ S +TP S +++ NE LQR
Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175
>AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.2 bits (50), Expect = 2.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 55 SERSQKTPSSRSEVEINEELQR 120
S+ S +TP S +++ NE LQR
Sbjct: 154 SKSSSETPPSYNQLNYNENLQR 175
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.0 bits (47), Expect = 5.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 58 ERSQKTPSSRSEVEINEELQRGSGDDEGTGRRRP 159
E +K +S+ ++ I+EEL DDEG G P
Sbjct: 1217 EGEEKRDASKEDLGIDEEL-----DDEGEGDEGP 1245
>AF043440-1|AAC05665.1| 234|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 234
Score = 23.0 bits (47), Expect = 5.3
Identities = 9/34 (26%), Positives = 14/34 (41%)
Frame = +1
Query: 343 HVSPAAAHAGAHQPLKPVTTHPVAAVTSGAPAPS 444
H +PA H G+ L + H A+ P+
Sbjct: 38 HAAPAIQHVGSVHALPAIYQHSAPAIVKTIAQPT 71
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 22.2 bits (45), Expect = 9.3
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 328 APRRTHVSPAAAHAGAHQPLKPV 396
APR V+P A G PL P+
Sbjct: 1133 APRIAEVAPFPATNGMAPPLSPI 1155
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,486
Number of Sequences: 2352
Number of extensions: 5598
Number of successful extensions: 24
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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