Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00432
(547 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal prote... 109 1e-24
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 33 0.10
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 33 0.10
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 33 0.10
U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical p... 29 1.7
U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical pr... 29 1.7
AL132853-5|CAB60443.1| 279|Caenorhabditis elegans Hypothetical ... 29 2.2
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 29 2.2
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 29 2.2
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 29 2.2
AC006769-14|AAF60579.1| 378|Caenorhabditis elegans Hypothetical... 29 2.2
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z78016-1|CAB01439.1| 276|Caenorhabditis elegans Hypothetical pr... 28 3.8
AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical ... 28 3.8
Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical pr... 27 6.7
AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical... 27 6.7
Z68218-4|CAA92474.1| 329|Caenorhabditis elegans Hypothetical pr... 27 8.8
L08403-2|AAA28024.2| 169|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 27 8.8
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 27 8.8
>L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 21 protein.
Length = 161
Score = 109 bits (262), Expect = 1e-24
Identities = 50/75 (66%), Positives = 58/75 (77%)
Frame = +2
Query: 29 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 208
MTNSKG RRGTR +FAR FR HG LSTY YK GD+VDI+ NGA QKGMP K YHG+
Sbjct: 1 MTNSKGLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGR 60
Query: 209 TGRVYNVTAHALGVI 253
TGR++NVT A+G+I
Sbjct: 61 TGRIFNVTRGAVGII 75
Score = 99.5 bits (237), Expect = 1e-21
Identities = 49/85 (57%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = +1
Query: 256 NKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTV-NLKRQPAPP 432
NKRVRG I+PKRINIR+EH+K SKCR DFL RVK N+ K AK+AG+ V LKR P P
Sbjct: 77 NKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALKRLPVAP 136
Query: 433 KAAH-IVSGTEKPVLLAPIPYEFVA 504
+ AH + + +P LLAP+ +E VA
Sbjct: 137 RGAHTVTTQNNEPELLAPLRFEIVA 161
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 33.5 bits (73), Expect = 0.10
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 213 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 76
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 33.5 bits (73), Expect = 0.10
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 213 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 76
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.10
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 213 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 76
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 220 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 265
>U00065-10|AAA50733.2| 382|Caenorhabditis elegans Hypothetical
protein D1044.1 protein.
Length = 382
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 187 TQSIPWKDRSRVQRDCSCSRCDCNKRVR-GRIIPKRINIRVEHVKHSKCRQDFLKRVKEN 363
+ IPWK+ V D + R N + ++ P ++ R++ VKH+ K+N
Sbjct: 177 SDEIPWKNYENVLYDAAYIRMLHNDTLDFEKLCPAELSGRIQEVKHAFDEDGVRNSEKKN 236
Query: 364 ERL 372
E+L
Sbjct: 237 EKL 239
>U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical
protein ZK418.6 protein.
Length = 825
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 406 NLKRQPAPPKAAHIVSGTE 462
NL+R+PAPPK H+ S E
Sbjct: 462 NLRRRPAPPKQNHVASPAE 480
>AL132853-5|CAB60443.1| 279|Caenorhabditis elegans Hypothetical
protein Y80D3A.9 protein.
Length = 279
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 471 DGFLSSTDDVGSFRGSWLSLQVDGLAGSL 385
DG LS D+ RG+WL + G G L
Sbjct: 39 DGMLSGVDEKDVARGTWLGMDAHGKVGML 67
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = +2
Query: 203 GKTGRVYNV-TAHALGVIATSVFAEGLYRSASISVLSMSSTPSADKTSLRESKRMRGY*R 379
G + R N+ T+H ++AT F+ LY + + S S T K ++R + Y R
Sbjct: 661 GSSYRPTNMYTSHFDDIVATGAFSSALYSTNRLIERSRSRTRER-KQAMRSQRSASNYYR 719
Query: 380 KPRLPARPST*RDSQLPLKLPTSSVELRNPSYL 478
P R+ P S RN S++
Sbjct: 720 YSSQAPAPLRAREYSTPPTREISRAPSRNTSFV 752
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = +2
Query: 203 GKTGRVYNV-TAHALGVIATSVFAEGLYRSASISVLSMSSTPSADKTSLRESKRMRGY*R 379
G + R N+ T+H ++AT F+ LY + + S S T K ++R + Y R
Sbjct: 611 GSSYRPTNMYTSHFDDIVATGAFSSALYSTNRLIERSRSRTRER-KQAMRSQRSASNYYR 669
Query: 380 KPRLPARPST*RDSQLPLKLPTSSVELRNPSYL 478
P R+ P S RN S++
Sbjct: 670 YSSQAPAPLRAREYSTPPTREISRAPSRNTSFV 702
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Frame = +2
Query: 203 GKTGRVYNV-TAHALGVIATSVFAEGLYRSASISVLSMSSTPSADKTSLRESKRMRGY*R 379
G + R N+ T+H ++AT F+ LY + + S S T K ++R + Y R
Sbjct: 661 GSSYRPTNMYTSHFDDIVATGAFSSALYSTNRLIERSRSRTRER-KQAMRSQRSASNYYR 719
Query: 380 KPRLPARPST*RDSQLPLKLPTSSVELRNPSYL 478
P R+ P S RN S++
Sbjct: 720 YSSQAPAPLRAREYSTPPTREISRAPSRNTSFV 752
>AC006769-14|AAF60579.1| 378|Caenorhabditis elegans Hypothetical
protein Y45G12C.1 protein.
Length = 378
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 324 GVLDMLNT-DIDALRYNPSANTLVAITPRA*AVTLYTRPVFPWYTLCGI 181
G+LD T DID L+ N + L A+ A T +T + W+TLC +
Sbjct: 272 GLLDYFPTFDIDDLKSNEKSLQLSAMLVYL-ARTQFTLDILKWHTLCAL 319
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 304 VEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVN-LKRQPAPPKAAHIVSGTEKPVLLA 480
VE+V + K+N++ K++++ T ++ PAPP+ +V EKPV A
Sbjct: 361 VENVVEKSTTPPATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVEKVEKPV--A 418
Query: 481 PI 486
P+
Sbjct: 419 PV 420
>Z78016-1|CAB01439.1| 276|Caenorhabditis elegans Hypothetical
protein R186.1 protein.
Length = 276
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 471 DGFLSSTDDVGSFRGSWLSLQVDGLAGSL 385
DG LS D + RG+WL L +G G +
Sbjct: 39 DGILSGVDKQENARGTWLGLNENGRIGMM 67
>AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical
protein F43C11.7 protein.
Length = 295
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 338 SCLHLECLTCSTRILMRFGIILPRTRLLQSHREHE 234
+C H C CS++++ F I+ P R RE+E
Sbjct: 26 TCGHSICKACSSKLVSNFKILCPFCRKTTELRENE 60
>Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical
protein C06H5.2 protein.
Length = 382
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -2
Query: 366 LILFDSLKEVLSALGVL 316
LILFD+LK VL ++GVL
Sbjct: 200 LILFDALKNVLQSVGVL 216
>Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical
protein C06H5.1 protein.
Length = 379
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -2
Query: 366 LILFDSLKEVLSALGVL 316
LILFD+LK VL ++GVL
Sbjct: 200 LILFDALKNVLQSVGVL 216
>Z81522-5|CAD98731.1| 663|Caenorhabditis elegans Hypothetical
protein F32B4.4b protein.
Length = 663
Score = 27.5 bits (58), Expect = 6.7
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +1
Query: 229 DCSCSRCDCNKRVRGRIIPKRINI----RVEHVKHSKCRQDFLKRVKENERLLKEAKAAG 396
D S R KR R +P I+ R H H +QD + + E+ +E ++
Sbjct: 229 DTSGCRGGAIKRSVERSVPNNISTSELRRKHHQIHVTVQQDAPRASYQTEQYARERSSST 288
Query: 397 KTVNLKRQPAPPKAAHIVSGTEKPVLLAP 483
T + +RQ +P ++ E P AP
Sbjct: 289 TTSSRRRQVSPDRSEQRRHRDEPPPRRAP 317
>Z81522-4|CAB04233.1| 771|Caenorhabditis elegans Hypothetical
protein F32B4.4a protein.
Length = 771
Score = 27.5 bits (58), Expect = 6.7
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +1
Query: 229 DCSCSRCDCNKRVRGRIIPKRINI----RVEHVKHSKCRQDFLKRVKENERLLKEAKAAG 396
D S R KR R +P I+ R H H +QD + + E+ +E ++
Sbjct: 337 DTSGCRGGAIKRSVERSVPNNISTSELRRKHHQIHVTVQQDAPRASYQTEQYARERSSST 396
Query: 397 KTVNLKRQPAPPKAAHIVSGTEKPVLLAP 483
T + +RQ +P ++ E P AP
Sbjct: 397 TTSSRRRQVSPDRSEQRRHRDEPPPRRAP 425
>AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical
protein Y73B6BL.1 protein.
Length = 751
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 130 QSWRHCRHQRQWCSSKGYATQSIPWKDRSRVQRDCSCS 243
Q RHC Q C S Y W+ RSRV +C+
Sbjct: 366 QPVRHCSEQDATCDSPFYWCDMKLWRCRSRVVYGGNCT 403
>Z68218-4|CAA92474.1| 329|Caenorhabditis elegans Hypothetical
protein K01H12.4 protein.
Length = 329
Score = 27.1 bits (57), Expect = 8.8
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Frame = +1
Query: 235 SCSRCDCNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLK 414
+ S C NK + + I K +E +KH KCR LK+ K ++ K AG T K
Sbjct: 148 TASSCS-NKSLYRKHIEKLAIEPLEDIKHLKCRG--LKKSKPDDLFPKATYDAG-TGKPK 203
Query: 415 RQPAPPKAAHI----VSGTEKPVLLAPIPYEFVA 504
+P + S T K LA P EFV+
Sbjct: 204 MALSPSSMVSVDLSYASTTAKSNSLAYQPMEFVS 237
>L08403-2|AAA28024.2| 169|Caenorhabditis elegans Hypothetical
protein F42H10.6 protein.
Length = 169
Score = 27.1 bits (57), Expect = 8.8
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 92 HG--TIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALGVIATSV 265
HG T L+ + VG V +G +V+ + + + K G V +TAH L V T
Sbjct: 72 HGGQTATLTDVITARAVGVTVKDKGMASVELAVSY-LLPVKVGDVLEITAHVLKVGRTMA 130
Query: 266 FAEGLYRSASISVLS 310
F + +R S +S
Sbjct: 131 FTDCEFRRKSDGKMS 145
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/72 (22%), Positives = 29/72 (40%)
Frame = +1
Query: 280 IPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGT 459
+P R+ V+ + ++ +R KE+E + + + + R P PP I
Sbjct: 207 LPPTPPARITSVRSDESIEEEERRRKESEETASFEELEAEIMRISRSPVPPPVLSIPPPP 266
Query: 460 EKPVLLAPIPYE 495
+ L IP E
Sbjct: 267 PPNIPLPTIPQE 278
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/72 (22%), Positives = 29/72 (40%)
Frame = +1
Query: 280 IPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGT 459
+P R+ V+ + ++ +R KE+E + + + + R P PP I
Sbjct: 207 LPPTPPARITSVRSDESIEEEERRRKESEETASFEELEAEIMRISRSPVPPPVLSIPPPP 266
Query: 460 EKPVLLAPIPYE 495
+ L IP E
Sbjct: 267 PPNIPLPTIPQE 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,288,688
Number of Sequences: 27780
Number of extensions: 257314
Number of successful extensions: 1045
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 980
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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