Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00431
         (799 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1629 - 28246440-28247339                                         30   2.5  
01_01_1028 - 8145716-8145841,8145943-8145988,8146329-8146548,814...    29   3.2  
11_01_0177 + 1406725-1406920,1407444-1408267                           28   7.5  
03_02_0422 - 8308711-8309100,8309197-8310724,8311394-8313411           28   9.9  
01_07_0124 + 41212728-41212922,41215156-41215210,41215336-412171...    28   9.9  

>07_03_1629 - 28246440-28247339
          Length = 299

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +1

Query: 379 FTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAH--NYGHINH 528
           F Y H A  Y  +L  FHA       A    V  G G+ A  H  +YGH +H
Sbjct: 94  FVYTHAAYNYPPFLAPFHAPQYAAAAAAPSSVQYGGGVGAAPHIGSYGHHHH 145


>01_01_1028 -
           8145716-8145841,8145943-8145988,8146329-8146548,
           8146832-8146955
          Length = 171

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 18/77 (23%), Positives = 28/77 (36%)
 Frame = +1

Query: 364 RNIILFTYLHIAALYGGYLFLFHAKWQTDLFAYILYVMSGLGITAGAHNYGHINHTKQSG 543
           R  IL   L + A +    F     W T  F     +   +GI +G   + HI H     
Sbjct: 37  RGFILGPGLRLPAHFHPMFFPI-GNWATGFFVVFSLLAGVVGIASGLVGFSHIRHWNYYS 95

Query: 544 LYVLSLSSSIPWLFRIL 594
           L   + +  + W   +L
Sbjct: 96  LQPAATTGLLAWALTVL 112


>11_01_0177 + 1406725-1406920,1407444-1408267
          Length = 339

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +2

Query: 239 NMAPNERMQMVFSLKMMLILQT*DCPAHLY 328
           N+   + M  +FSLK+  I  T D P HLY
Sbjct: 87  NIHEEQFMMQIFSLKLSNITATVDGPVHLY 116


>03_02_0422 - 8308711-8309100,8309197-8310724,8311394-8313411
          Length = 1311

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 18/75 (24%), Positives = 36/75 (48%)
 Frame = -1

Query: 484  VLTLHTIYRQIGLFAISHEIRKGSLHTTQQYEGM*KVLYSSKLVSLGSCRLAVQVCWTVL 305
            VL++     +I +  +SH+ R+G      +   M ++ + + +  LG CR   ++   +L
Sbjct: 1037 VLSVSNSNSEIAVKRVSHDSRQGVKEFIAEVVSMGRLRHKNLVQLLGYCRRKGEL---LL 1093

Query: 304  SLEYQHHFQREHHLH 260
              EY  +   + HLH
Sbjct: 1094 VYEYMSNGSLDKHLH 1108


>01_07_0124 +
           41212728-41212922,41215156-41215210,41215336-41217128,
           41217363-41217521,41217883-41218054,41218173-41218471,
           41219060-41219368
          Length = 993

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 301 DLGLSSTPVQQADNYPKKLVWRNII 375
           D  +   PV + DN+  K++WRNI+
Sbjct: 823 DAMMKRPPVGRGDNFITKVMWRNIV 847


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,176,609
Number of Sequences: 37544
Number of extensions: 442105
Number of successful extensions: 1032
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)