Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00430
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46674-5|AAA85757.1|  708|Caenorhabditis elegans Hypothetical pr...    33   0.21 
AF077529-2|AAC26254.1|  292|Caenorhabditis elegans Hypothetical ...    33   0.21 
Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z49072-4|CAA88882.4|  414|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>U46674-5|AAA85757.1|  708|Caenorhabditis elegans Hypothetical
           protein T26A8.1 protein.
          Length = 708

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
 Frame = +1

Query: 250 NVTNSLRSSVRATARESKYPTGFPSCLWTTATLP-VTSET-AALKLLPSARGRSVSGALQ 423
           + + +  SS  +T   +   T  PS    T T+P  TSE  A + +         +G L 
Sbjct: 332 STSTTTTSSTTSTTTTTTTTTETPSTTVITTTIPSTTSEPEATIDVKTRDSKEDTNGVLP 391

Query: 424 TSPGLSTPPKDSSLPTDIL 480
           TS  + TPP   + P D L
Sbjct: 392 TSSAIETPPYPENCPEDSL 410


>AF077529-2|AAC26254.1|  292|Caenorhabditis elegans Hypothetical
           protein C09E8.2a protein.
          Length = 292

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = -2

Query: 596 IFVLNSVWVFKSAGSSYPAP*YKPFLPTHVEILNVIRIFRISVGNDESFGGVDNPGDVCS 417
           IF+ +  + F    + +  P ++ FL     I    ++ R  +G D SFGG +NP +V  
Sbjct: 5   IFIFSLTFTFSRISADF-TPHFRKFLHDSYGIAITGQLERTDLGMDASFGGKENPTEVPQ 63

Query: 416 APL 408
            P+
Sbjct: 64  NPV 66


>Z70035-7|CAA93867.1|  369|Caenorhabditis elegans Hypothetical
           protein R09D1.7 protein.
          Length = 369

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
 Frame = +1

Query: 238 RRSYNVTNSLRSSVRATARESKYPTGFP--SCLWTTATLPVTSETAALKLLPSARGRSVS 411
           RR+YN+ +S++S V  T + +KY    P  + LW     P+      +    +  G    
Sbjct: 214 RRNYNIHHSVQSYVCKTDQSNKYNIAIPFYTMLWKHVQGPINPPNIEIYRNATFNGTVFG 273

Query: 412 GALQTSPGLSTPPKDSSLPTDILKILMTFK 501
            A  +   +     D S PT   +I   FK
Sbjct: 274 EANMSRKLVQQEGYDLSHPTFNSEIRAAFK 303


>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical protein
            C29A12.4 protein.
          Length = 1560

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
 Frame = -2

Query: 440  DNPGDVCSAPLTDRPRADGNSF----NAAVSDVTGSVAVVHRH-DGNPV 309
            D   D C+ PL  +P  +GN +     A +++  G+ A + R+ +GN V
Sbjct: 1501 DRSNDSCTQPLLAKPHINGNGYEPLKGAVIANGNGATATMMRNGNGNGV 1549


>Z49072-4|CAA88882.4|  414|Caenorhabditis elegans Hypothetical
           protein T24A11.3 protein.
          Length = 414

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = +1

Query: 553 LPADLKTQTEFST-KMVFADARSIND-HLYNLVTGGDYINAV 672
           +P +LK  T   T KM F DA+ IND +  N   G +++N +
Sbjct: 235 VPKELKYVTTMGTEKMAFLDAKVINDIYCPNACQGRNHLNCL 276


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.316    0.130    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,865,636
Number of Sequences: 27780
Number of extensions: 372216
Number of successful extensions: 1306
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)