Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00429
         (739 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g38185.2 68415.m04690 zinc finger (C3HC4-type RING finger) fa...    29   2.4  
At2g38185.1 68415.m04689 zinc finger (C3HC4-type RING finger) fa...    29   2.4  
At4g11900.1 68417.m01893 S-locus lectin protein kinase family pr...    29   3.2  
At3g23920.1 68416.m03005 beta-amylase, putative / 1,4-alpha-D-gl...    29   4.3  
At5g19600.1 68418.m02333 sulfate transporter, putative similar t...    28   5.6  
At3g51895.1 68416.m05692 sulfate transporter (ST1) identical to ...    27   9.8  
At3g03630.1 68416.m00366 cysteine synthase, chloroplast, putativ...    27   9.8  
At1g22150.1 68414.m02769 sulfate transporter (Sultr1;3) identica...    27   9.8  

>At2g38185.2 68415.m04690 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile PF00097: Zinc
           finger, C3HC4 type (RING finger)
          Length = 441

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = +2

Query: 452 YCYSVALMHRRDTRKVRVKILQKYFPLNSWIPKYSLKLVKPQLLFHQTFHAYLLSFHETT 631
           YC+S+AL+       + ++ L  Y P N W+   S  LV+P  +F ++    +L + E  
Sbjct: 63  YCFSLALLIWFFASFILIENL--YGPKNVWLGPSSSILVEPSSIFVKSIKVKVLDYSEPG 120

Query: 632 LR 637
           L+
Sbjct: 121 LQ 122


>At2g38185.1 68415.m04689 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile PF00097: Zinc
           finger, C3HC4 type (RING finger)
          Length = 441

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 18/62 (29%), Positives = 32/62 (51%)
 Frame = +2

Query: 452 YCYSVALMHRRDTRKVRVKILQKYFPLNSWIPKYSLKLVKPQLLFHQTFHAYLLSFHETT 631
           YC+S+AL+       + ++ L  Y P N W+   S  LV+P  +F ++    +L + E  
Sbjct: 63  YCFSLALLIWFFASFILIENL--YGPKNVWLGPSSSILVEPSSIFVKSIKVKVLDYSEPG 120

Query: 632 LR 637
           L+
Sbjct: 121 LQ 122


>At4g11900.1 68417.m01893 S-locus lectin protein kinase family
           protein contains Pfam domains, PF00954: S-locus
           glycoprotein family, PF00069: Protein kinase domain, and
           PF01453: Lectin (probable mannose binding)
          Length = 849

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 20/89 (22%), Positives = 38/89 (42%)
 Frame = +2

Query: 458 YSVALMHRRDTRKVRVKILQKYFPLNSWIPKYSLKLVKPQLLFHQTFHAYLLSFHETTLR 637
           Y + + +R  + +  V +  +  PL      Y LK++   L+ H    A          R
Sbjct: 66  YYIGMWYRHVSPQTIVWVANRESPLGGDASTYLLKILDGNLILHDNISA---------TR 116

Query: 638 RT*KKNTALRTGEKISASTCIIITGIWST 724
           ++  + T+ R+ +KIS    +    +WST
Sbjct: 117 KSHTEGTSRRSPQKISEGNLLFHETVWST 145


>At3g23920.1 68416.m03005 beta-amylase, putative /
           1,4-alpha-D-glucan maltohydrolase, putative similar to
           beta-amylase enzyme [Arabidopsis thaliana] GI:6065749,
           beta-amylase PCT-BMYI from [Solanum tuberosum]; contains
           Pfam profile PF01373: Glycosyl hydrolase family 14
          Length = 575

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +2

Query: 281 IATQLPKDAEFSLFLPKHQEMANE--LLGVLMDVPENELQDLLSTCAFARVNLNPQLF 448
           +A ++P   E +L  P++ + A+E  L    +++ +N   +    CAF  + +NP+LF
Sbjct: 468 LAAEVPLAGENAL--PRYDDYAHEQILKASALNLDQNNEGEPREMCAFTYLRMNPELF 523


>At5g19600.1 68418.m02333 sulfate transporter, putative similar to
           sulfate transporter [Arabidopsis thaliana] GI:2285885;
           contains Pfam profiles PF00916: Sulfate transporter
           family, PF01740: STAS domain; supporting cDNA
           gi|14141683|dbj|AB061739.1|
          Length = 634

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +2

Query: 506 KILQKYFPLNSWIPKYSLKLVKPQLL 583
           K+L+ + P+  W+PKY ++ +K  +L
Sbjct: 58  KLLEYFVPIFEWLPKYDMQKLKYDVL 83


>At3g51895.1 68416.m05692 sulfate transporter (ST1) identical to
           sulfate transporter [Arabidopsis thaliana] GI:2285885
          Length = 658

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
 Frame = +2

Query: 518 KYF-PLNSWIPKYSLKLVKPQLL 583
           KYF P+  W P+Y+LK  K  L+
Sbjct: 65  KYFLPIFEWAPRYNLKFFKSDLI 87


>At3g03630.1 68416.m00366 cysteine synthase, chloroplast, putative /
           O-acetylserine (thiol)-lyase, putative / O-acetylserine
           sulfhydrylase, putative identical to SP|O22682 Probable
           cysteine synthase, chloroplast precursor {Arabidopsis
           thaliana}, similar to SP|P31300 Cysteine synthase,
           chloroplast precursor {Capsicum annuum}
          Length = 404

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -2

Query: 432 RFTRAKAHVDSKSCNSFSGTSMRTPRSSFAIS*CLGRNNENSAS 301
           RF+ AK  + S   +S S  ++RTP SSF +    G+++  + S
Sbjct: 25  RFSTAKLSLFSFHHDSSSSLAVRTPVSSFVVGAISGKSSTGTKS 68


>At1g22150.1 68414.m02769 sulfate transporter (Sultr1;3) identical
           to sulfate tansporter Sultr1;3 [Arabidopsis thaliana]
           GI:10716805; contains Pfam profile PF00916: Sulfate
           transporter family; contains Pfam profile PF01740: STAS
           domain;  contains TIGRfam profile TIGR00815: sulfate
           permease
          Length = 656

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 470 LMHRRDTRKVRVKIL--QKYFPLNSWIPKYSLKLVKPQLL 583
           L H +D  K +  +L  Q  FP+  W  KY+LKL +  L+
Sbjct: 59  LRHFKDQSKSKKLMLGIQSVFPVIEWGRKYNLKLFRGDLI 98


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,726,114
Number of Sequences: 28952
Number of extensions: 321505
Number of successful extensions: 853
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)