Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00427
(456 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 115 6e-25
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 111 7e-24
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 99 2e-20
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 99 4e-20
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 98 9e-20
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 62 7e-09
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 58 9e-08
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 57 2e-07
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 52 4e-06
UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102... 44 0.001
UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1; ... 44 0.002
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 41 0.015
UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1; Flavobacteri... 34 1.7
UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9; Euryar... 33 2.2
UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse t... 33 2.9
UniRef50_Q60KI9 Cluster: Putative uncharacterized protein CBG240... 32 6.7
UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella ve... 32 6.7
UniRef50_P21877 Cluster: Cellulose synthase 1 [Includes: Cellulo... 32 6.7
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 115 bits (276), Expect = 6e-25
Identities = 49/89 (55%), Positives = 60/89 (67%)
Frame = +2
Query: 2 LRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFC 181
LRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H ++N++FC
Sbjct: 11 LRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKRNQSFC 70
Query: 182 PVLNLDKLWTLVSEQTRLKYASAPVARSP 268
P +NLDKLWTLVSEQTR+ A +P
Sbjct: 71 PTVNLDKLWTLVSEQTRVNAAKNKTGAAP 99
Score = 36.7 bits (81), Expect = 0.24
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 253 SGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414
+G P+I++V++ PKQPVIV VGGACVL A
Sbjct: 95 TGAAPIIDVVRSGYYKVLGKGKLPKQPVIVKAKFFSRRAEEKIKSVGGACVLVA 148
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 111 bits (267), Expect = 7e-24
Identities = 45/58 (77%), Positives = 51/58 (87%)
Frame = +2
Query: 71 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYA 244
NAGG+HHHRIN DKYHPGYFGK+GMRNFH RKN +CP +NLDKLW+LVSE+TR YA
Sbjct: 20 NAGGQHHHRINFDKYHPGYFGKVGMRNFHVRKNGLYCPTVNLDKLWSLVSEKTRTTYA 77
Score = 38.3 bits (85), Expect = 0.077
Identities = 21/52 (40%), Positives = 24/52 (46%)
Frame = +1
Query: 259 KVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414
K PVI++VKA PKQPVIV VGGAC+L A
Sbjct: 82 KAPVIDVVKAGYFKVLGKGLLPKQPVIVKAKFFSRTAEQKIKGVGGACILVA 133
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 99 bits (238), Expect = 2e-20
Identities = 44/78 (56%), Positives = 50/78 (64%)
Frame = +2
Query: 5 RGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCP 184
RGHVS NAGG HHHRI DKYHPGYFGK+GMR FH +NK FCP
Sbjct: 12 RGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFFCP 71
Query: 185 VLNLDKLWTLVSEQTRLK 238
++NLDKLW+LV E + K
Sbjct: 72 IVNLDKLWSLVPEDVKAK 89
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 99.1 bits (236), Expect = 4e-20
Identities = 46/83 (55%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Frame = +2
Query: 2 LRGHVSXXXXXXXXXXXXXXXXXN--AGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 175
LRGHVS AGG HHHRI M+K+HPGY+GKLGMR FH +KN
Sbjct: 11 LRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGMRTFHLKKNPL 70
Query: 176 FCPVLNLDKLWTLVSEQTRLKYA 244
CPV+N+DKLW+LVS+ TR KYA
Sbjct: 71 HCPVVNIDKLWSLVSDATRQKYA 93
Score = 37.1 bits (82), Expect = 0.18
Identities = 20/52 (38%), Positives = 24/52 (46%)
Frame = +1
Query: 259 KVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414
KVPVI++ KA P QPV+V VGGACVL+A
Sbjct: 98 KVPVIDVTKAGFFKVLGKGRLPNQPVVVKAKYFSKTAERRIVAVGGACVLTA 149
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 97.9 bits (233), Expect = 9e-20
Identities = 42/76 (55%), Positives = 49/76 (64%)
Frame = +2
Query: 5 RGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCP 184
RGHVS AGG+HHHRI MDKYHPGYFGK+GMR+FH KN+ CP
Sbjct: 63 RGHVSAGHGRIGKHRKHPAGRGMAGGQHHHRIMMDKYHPGYFGKVGMRHFHKLKNQTVCP 122
Query: 185 VLNLDKLWTLVSEQTR 232
+N+DKLWTLV + R
Sbjct: 123 TINIDKLWTLVGTEKR 138
Score = 36.7 bits (81), Expect = 0.24
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 223 TDEAEVCICSSGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGAC 402
T++ E C ++ + PVI++ P QPV+V +VGGAC
Sbjct: 135 TEKREECAKNTSQAPVIDLTDHGIFKLLGKGQLPNQPVVVKCRYISKLAEKKIKEVGGAC 194
Query: 403 VLSA 414
+L+A
Sbjct: 195 ILTA 198
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 61.7 bits (143), Expect = 7e-09
Identities = 28/67 (41%), Positives = 36/67 (53%)
Frame = +2
Query: 5 RGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCP 184
RGHVS N+GG+HHH+I +KYH +FGK GMR + K NF
Sbjct: 12 RGHVSSGHGRVGKHRKHPGGRGNSGGQHHHKIFFEKYHKKHFGKTGMRYYRKLKQNNFNK 71
Query: 185 VLNLDKL 205
+NLDK+
Sbjct: 72 SINLDKI 78
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 58.0 bits (134), Expect = 9e-08
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +2
Query: 80 GEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTR 232
G ++ + YFGK+GMR+FH +N +F PV+NLDKLWTLV + R
Sbjct: 77 GSQEMEVDREIGRDSYFGKVGMRHFHLTRNSSFRPVVNLDKLWTLVPAEQR 127
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/39 (48%), Positives = 20/39 (51%)
Frame = +2
Query: 5 RGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHP 121
RGHVS AGG+HHHR NMDKYHP
Sbjct: 12 RGHVSAGNGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHP 50
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 57.2 bits (132), Expect = 2e-07
Identities = 21/37 (56%), Positives = 31/37 (83%)
Frame = +2
Query: 107 DKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLV 217
DK+HPG FGK+GMR+FH + K CP++++DKLW++V
Sbjct: 28 DKHHPGNFGKVGMRHFHKLRIKLHCPIVHIDKLWSMV 64
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 52.4 bits (120), Expect = 4e-06
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +2
Query: 2 LRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFC 181
LRGHVS AGG H + ++HP Y GK GMR +H ++N ++
Sbjct: 11 LRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRVYHRKENSDYA 70
Query: 182 PVLNLDKLWTLVSEQTRLKYASAP 253
++ +LW ++ ++ R + P
Sbjct: 71 RPISSARLWGMIPKEQRYDFLDNP 94
>UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102C;
n=2; Saccharomycetaceae|Rep: Putative uncharacterized
protein YGL102C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 142
Score = 44.4 bits (100), Expect = 0.001
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = -3
Query: 241 ILQPRLFRD*CPKLI*VQNWTEILVLSKVEISHTKFAKVSRMVLVHVDXXXXXXXXXXXX 62
+L +F D CP+ + VQ+W + L VE+SHT +++ MV +HV+
Sbjct: 63 VLVSLVFWDQCPQFVQVQDWLPEMSLLLVEVSHTNLTEITWMVFIHVNSVVMLTTGHTST 122
Query: 61 XXXXXVLSDTTMS 23
VL+DTT +
Sbjct: 123 TGVLSVLTDTTFT 135
>UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1;
n=1; Arabidopsis thaliana|Rep: Putative 60S ribosomal
protein L27a-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 104
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 89 HHRINMDKYHPGYFGK--LGMRNFHFRKNKNFCPVLNLDKLWTLV 217
H R + PG G +GMR FH +NK +C ++NLDKLW++V
Sbjct: 19 HGRFGKHRKLPGSRGNAGVGMRYFHKLRNKFYCQIVNLDKLWSMV 63
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 40.7 bits (91), Expect = 0.015
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 74 AGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 175
+GG+HHH+I ++Y YF K GMR ++ K N
Sbjct: 35 SGGQHHHKIIFERYRETYFRKTGMRIYNLEKTLN 68
>UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1;
Flavobacteriales bacterium HTCC2170|Rep: Putative
lipoprotein - Flavobacteriales bacterium HTCC2170
Length = 535
Score = 33.9 bits (74), Expect = 1.7
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 404 TQAPPTSLIFFSADFEKNFAFTMTGCLGSLPL 309
T A SL FFS D + N A T GCLG+ P+
Sbjct: 306 TDAEGNSLYFFSLDTKDNSACTSAGCLGAWPV 337
>UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Methanococcus maripaludis
Length = 143
Score = 33.5 bits (73), Expect = 2.2
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +2
Query: 71 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASA 250
NAG + H +++ K++P YFGK G N+N C + L+ + E+ LKY A
Sbjct: 36 NAGHQKHKWLSVCKFNPDYFGKYGF-------NRNPCLIKQLETINIGELEEYILKYKDA 88
>UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse
transcriptase; n=1; Arabidopsis thaliana|Rep: Putative
non-LTR retroelement reverse transcriptase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1044
Score = 33.1 bits (72), Expect = 2.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 106 GQVPSWILWQTWYEKFPL*KEQEFLSSFEL 195
GQ+P WILW W + L EQ+ +SS +L
Sbjct: 842 GQLPIWILWNLWNCRNKLIFEQKHISSMDL 871
>UniRef50_Q60KI9 Cluster: Putative uncharacterized protein CBG24039;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG24039 - Caenorhabditis
briggsae
Length = 991
Score = 31.9 bits (69), Expect = 6.7
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 95 RINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLD-KLWTLVSEQ 226
++ D+Y Y G L + FHF K C + +LD K WT++++Q
Sbjct: 894 KVLADRYKQ-YNGMLKEKKFHFDKLFEICKLTDLDKKQWTILNDQ 937
>UniRef50_A7RPS0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 306
Score = 31.9 bits (69), Expect = 6.7
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -2
Query: 179 RNSCSF*SGNFSYQVCQSIQDGTCPC*FCDGAHHQHYHDLLDAYGA 42
R+SC + F +C+S T PC D H +H DL+D GA
Sbjct: 108 RSSCQ--ARCFMNNLCRSYNYNTTPCQLSDSDHLEHPSDLVDKPGA 151
>UniRef50_P21877 Cluster: Cellulose synthase 1 [Includes: Cellulose
synthase catalytic domain [UDP-forming] (EC 2.4.1.12);
Cyclic di-GMP-binding domain (Cellulose synthase 1
regulatory domain)]; n=9; cellular organisms|Rep:
Cellulose synthase 1 [Includes: Cellulose synthase
catalytic domain [UDP-forming] (EC 2.4.1.12); Cyclic
di-GMP-binding domain (Cellulose synthase 1 regulatory
domain)] - Acetobacter xylinus (Gluconacetobacter
xylinus)
Length = 1550
Score = 31.9 bits (69), Expect = 6.7
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 116 HPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPVARSPSSILSKL 289
+P +F NF+F C + D LW +S+ ++L+ + +A P +LS+L
Sbjct: 919 NPIFFVSGNRLNFNFASGSKGCSDITNDTLWATISQNSQLQITT--IALPPRRLLSRL 974
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 388,944,237
Number of Sequences: 1657284
Number of extensions: 7287502
Number of successful extensions: 18883
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18873
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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