BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00427 (456 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein. 99 3e-21 U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal prot... 99 3e-21 AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p pro... 99 3e-21 AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA... 99 3e-21 X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal prot... 97 1e-20 D10228-1|BAA01080.1| 761|Drosophila melanogaster Ets domain pro... 29 2.2 EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. 28 6.8 EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. 28 6.8 BT021209-1|AAX33357.1| 766|Drosophila melanogaster SD09342p pro... 28 6.8 AE014296-2499|ABI31254.1| 1063|Drosophila melanogaster CG7255-PH... 28 6.8 AE014296-2498|ABC66142.1| 1063|Drosophila melanogaster CG7255-PF... 28 6.8 X67704-1|CAA47941.1| 334|Drosophila melanogaster sperm protein ... 27 9.1 AY060667-1|AAL28215.1| 334|Drosophila melanogaster GH09231p pro... 27 9.1 AE014297-4221|AAF56779.1| 334|Drosophila melanogaster CG11719-P... 27 9.1 >U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein. Length = 149 Score = 98.7 bits (235), Expect = 3e-21 Identities = 43/75 (57%), Positives = 48/75 (64%) Frame = +2 Query: 2 LRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFC 181 LRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F Sbjct: 12 LRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFR 71 Query: 182 PVLNLDKLWTLVSEQ 226 P +NLDKLW+LV + Sbjct: 72 PEINLDKLWSLVGAE 86 Score = 30.7 bits (66), Expect = 0.97 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = +1 Query: 253 SGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414 S K PVI++VK P +PVIV GG C+LSA Sbjct: 96 STKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149 >U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal protein RpL27a protein. Length = 149 Score = 98.7 bits (235), Expect = 3e-21 Identities = 43/75 (57%), Positives = 48/75 (64%) Frame = +2 Query: 2 LRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFC 181 LRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F Sbjct: 12 LRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFR 71 Query: 182 PVLNLDKLWTLVSEQ 226 P +NLDKLW+LV + Sbjct: 72 PEINLDKLWSLVGAE 86 Score = 30.7 bits (66), Expect = 0.97 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = +1 Query: 253 SGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414 S K PVI++VK P +PVIV GG C+LSA Sbjct: 96 STKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149 >AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p protein. Length = 149 Score = 98.7 bits (235), Expect = 3e-21 Identities = 43/75 (57%), Positives = 48/75 (64%) Frame = +2 Query: 2 LRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFC 181 LRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F Sbjct: 12 LRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFR 71 Query: 182 PVLNLDKLWTLVSEQ 226 P +NLDKLW+LV + Sbjct: 72 PEINLDKLWSLVGAE 86 Score = 30.7 bits (66), Expect = 0.97 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = +1 Query: 253 SGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414 S K PVI++VK P +PVIV GG C+LSA Sbjct: 96 STKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149 >AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA protein. Length = 149 Score = 98.7 bits (235), Expect = 3e-21 Identities = 43/75 (57%), Positives = 48/75 (64%) Frame = +2 Query: 2 LRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFC 181 LRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F Sbjct: 12 LRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFR 71 Query: 182 PVLNLDKLWTLVSEQ 226 P +NLDKLW+LV + Sbjct: 72 PEINLDKLWSLVGAE 86 Score = 30.7 bits (66), Expect = 0.97 Identities = 18/54 (33%), Positives = 22/54 (40%) Frame = +1 Query: 253 SGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414 S K PVI++VK P +PVIV GG C+LSA Sbjct: 96 STKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149 >X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal protein L27a protein. Length = 149 Score = 96.7 bits (230), Expect = 1e-20 Identities = 42/75 (56%), Positives = 47/75 (62%) Frame = +2 Query: 2 LRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFC 181 LRGHVS N GG HHHRIN DKYHPGYFGK+GMRNFH R+ F Sbjct: 12 LRGHVSHGHGRIGKHRKHPGGRGNLGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFR 71 Query: 182 PVLNLDKLWTLVSEQ 226 P +NLDKLW+LV + Sbjct: 72 PEINLDKLWSLVGAE 86 Score = 31.9 bits (69), Expect = 0.42 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = +1 Query: 253 SGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414 S K PVI++VK P +PVIV + GG C+LSA Sbjct: 96 STKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKEAGGVCLLSA 149 >D10228-1|BAA01080.1| 761|Drosophila melanogaster Ets domain protein protein. Length = 761 Score = 29.5 bits (63), Expect = 2.2 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +3 Query: 267 RHQYCQSWILQVARQRQTPQTTCHSKSKVLLKIS 368 RH C+ + +A R+TP TC S+ + +L+ S Sbjct: 710 RHSQCRWKAIAMAASRRTPSDTCSSRRRSVLRQS 743 >EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. Length = 796 Score = 27.9 bits (59), Expect = 6.8 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +2 Query: 77 GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 175 GG+ +M++YH G G+R H+ N N Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442 >EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. Length = 796 Score = 27.9 bits (59), Expect = 6.8 Identities = 11/33 (33%), Positives = 17/33 (51%) Frame = +2 Query: 77 GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 175 GG+ +M++YH G G+R H+ N N Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442 >BT021209-1|AAX33357.1| 766|Drosophila melanogaster SD09342p protein. Length = 766 Score = 27.9 bits (59), Expect = 6.8 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -2 Query: 263 TLPLEQMHTSASSVQRLMSKAYLSSKLDRN 174 T PL + S + V+RLM KA K+DRN Sbjct: 592 TRPLLKQSKSETDVRRLMLKAISELKIDRN 621 >AE014296-2499|ABI31254.1| 1063|Drosophila melanogaster CG7255-PH, isoform H protein. Length = 1063 Score = 27.9 bits (59), Expect = 6.8 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -2 Query: 263 TLPLEQMHTSASSVQRLMSKAYLSSKLDRN 174 T PL + S + V+RLM KA K+DRN Sbjct: 889 TRPLLKQSKSETDVRRLMLKAISELKIDRN 918 >AE014296-2498|ABC66142.1| 1063|Drosophila melanogaster CG7255-PF, isoform F protein. Length = 1063 Score = 27.9 bits (59), Expect = 6.8 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = -2 Query: 263 TLPLEQMHTSASSVQRLMSKAYLSSKLDRN 174 T PL + S + V+RLM KA K+DRN Sbjct: 889 TRPLLKQSKSETDVRRLMLKAISELKIDRN 918 >X67704-1|CAA47941.1| 334|Drosophila melanogaster sperm protein protein. Length = 334 Score = 27.5 bits (58), Expect = 9.1 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -1 Query: 87 CSPPALPRPPGCLRCFPIRPCP 22 CSPP P C C+P P P Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311 >AY060667-1|AAL28215.1| 334|Drosophila melanogaster GH09231p protein. Length = 334 Score = 27.5 bits (58), Expect = 9.1 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -1 Query: 87 CSPPALPRPPGCLRCFPIRPCP 22 CSPP P C C+P P P Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311 >AE014297-4221|AAF56779.1| 334|Drosophila melanogaster CG11719-PA protein. Length = 334 Score = 27.5 bits (58), Expect = 9.1 Identities = 10/22 (45%), Positives = 11/22 (50%) Frame = -1 Query: 87 CSPPALPRPPGCLRCFPIRPCP 22 CSPP P C C+P P P Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,044,128 Number of Sequences: 53049 Number of extensions: 375187 Number of successful extensions: 1527 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1236 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1440 length of database: 24,988,368 effective HSP length: 79 effective length of database: 20,797,497 effective search space used: 1497419784 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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