Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00427
(456 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein. 99 3e-21
U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal prot... 99 3e-21
AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p pro... 99 3e-21
AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA... 99 3e-21
X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal prot... 97 1e-20
D10228-1|BAA01080.1| 761|Drosophila melanogaster Ets domain pro... 29 2.2
EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. 28 6.8
EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. 28 6.8
BT021209-1|AAX33357.1| 766|Drosophila melanogaster SD09342p pro... 28 6.8
AE014296-2499|ABI31254.1| 1063|Drosophila melanogaster CG7255-PH... 28 6.8
AE014296-2498|ABC66142.1| 1063|Drosophila melanogaster CG7255-PF... 28 6.8
X67704-1|CAA47941.1| 334|Drosophila melanogaster sperm protein ... 27 9.1
AY060667-1|AAL28215.1| 334|Drosophila melanogaster GH09231p pro... 27 9.1
AE014297-4221|AAF56779.1| 334|Drosophila melanogaster CG11719-P... 27 9.1
>U66358-1|AAC47472.1| 149|Drosophila melanogaster RpL27a protein.
Length = 149
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/75 (57%), Positives = 48/75 (64%)
Frame = +2
Query: 2 LRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFC 181
LRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F
Sbjct: 12 LRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFR 71
Query: 182 PVLNLDKLWTLVSEQ 226
P +NLDKLW+LV +
Sbjct: 72 PEINLDKLWSLVGAE 86
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +1
Query: 253 SGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414
S K PVI++VK P +PVIV GG C+LSA
Sbjct: 96 STKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>U66357-1|AAC47475.1| 149|Drosophila melanogaster ribosomal protein
RpL27a protein.
Length = 149
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/75 (57%), Positives = 48/75 (64%)
Frame = +2
Query: 2 LRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFC 181
LRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F
Sbjct: 12 LRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFR 71
Query: 182 PVLNLDKLWTLVSEQ 226
P +NLDKLW+LV +
Sbjct: 72 PEINLDKLWSLVGAE 86
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +1
Query: 253 SGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414
S K PVI++VK P +PVIV GG C+LSA
Sbjct: 96 STKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>AY071144-1|AAL48766.1| 149|Drosophila melanogaster RE17991p
protein.
Length = 149
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/75 (57%), Positives = 48/75 (64%)
Frame = +2
Query: 2 LRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFC 181
LRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F
Sbjct: 12 LRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFR 71
Query: 182 PVLNLDKLWTLVSEQ 226
P +NLDKLW+LV +
Sbjct: 72 PEINLDKLWSLVGAE 86
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +1
Query: 253 SGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414
S K PVI++VK P +PVIV GG C+LSA
Sbjct: 96 STKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>AE014134-746|AAF51006.3| 149|Drosophila melanogaster CG15442-PA
protein.
Length = 149
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/75 (57%), Positives = 48/75 (64%)
Frame = +2
Query: 2 LRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFC 181
LRGHVS NAGG HHHRIN DKYHPGYFGK+GMRNFH R+ F
Sbjct: 12 LRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFR 71
Query: 182 PVLNLDKLWTLVSEQ 226
P +NLDKLW+LV +
Sbjct: 72 PEINLDKLWSLVGAE 86
Score = 30.7 bits (66), Expect = 0.97
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +1
Query: 253 SGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414
S K PVI++VK P +PVIV GG C+LSA
Sbjct: 96 STKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKKAGGVCLLSA 149
>X74484-1|CAA52601.1| 149|Drosophila melanogaster ribosomal protein
L27a protein.
Length = 149
Score = 96.7 bits (230), Expect = 1e-20
Identities = 42/75 (56%), Positives = 47/75 (62%)
Frame = +2
Query: 2 LRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFC 181
LRGHVS N GG HHHRIN DKYHPGYFGK+GMRNFH R+ F
Sbjct: 12 LRGHVSHGHGRIGKHRKHPGGRGNLGGMHHHRINFDKYHPGYFGKVGMRNFHLRRQHKFR 71
Query: 182 PVLNLDKLWTLVSEQ 226
P +NLDKLW+LV +
Sbjct: 72 PEINLDKLWSLVGAE 86
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +1
Query: 253 SGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414
S K PVI++VK P +PVIV + GG C+LSA
Sbjct: 96 STKAPVIDLVKFGYYKLLGRGHLPARPVIVKAKYFSKKAEDKIKEAGGVCLLSA 149
>D10228-1|BAA01080.1| 761|Drosophila melanogaster Ets domain
protein protein.
Length = 761
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 267 RHQYCQSWILQVARQRQTPQTTCHSKSKVLLKIS 368
RH C+ + +A R+TP TC S+ + +L+ S
Sbjct: 710 RHSQCRWKAIAMAASRRTPSDTCSSRRRSVLRQS 743
>EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 77 GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 175
GG+ +M++YH G G+R H+ N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442
>EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 77 GGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKN 175
GG+ +M++YH G G+R H+ N N
Sbjct: 410 GGDSQSESDMNEYHDNGEGHDGLRPSHYNSNSN 442
>BT021209-1|AAX33357.1| 766|Drosophila melanogaster SD09342p
protein.
Length = 766
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 263 TLPLEQMHTSASSVQRLMSKAYLSSKLDRN 174
T PL + S + V+RLM KA K+DRN
Sbjct: 592 TRPLLKQSKSETDVRRLMLKAISELKIDRN 621
>AE014296-2499|ABI31254.1| 1063|Drosophila melanogaster CG7255-PH,
isoform H protein.
Length = 1063
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 263 TLPLEQMHTSASSVQRLMSKAYLSSKLDRN 174
T PL + S + V+RLM KA K+DRN
Sbjct: 889 TRPLLKQSKSETDVRRLMLKAISELKIDRN 918
>AE014296-2498|ABC66142.1| 1063|Drosophila melanogaster CG7255-PF,
isoform F protein.
Length = 1063
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 263 TLPLEQMHTSASSVQRLMSKAYLSSKLDRN 174
T PL + S + V+RLM KA K+DRN
Sbjct: 889 TRPLLKQSKSETDVRRLMLKAISELKIDRN 918
>X67704-1|CAA47941.1| 334|Drosophila melanogaster sperm protein
protein.
Length = 334
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 87 CSPPALPRPPGCLRCFPIRPCP 22
CSPP P C C+P P P
Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311
>AY060667-1|AAL28215.1| 334|Drosophila melanogaster GH09231p
protein.
Length = 334
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 87 CSPPALPRPPGCLRCFPIRPCP 22
CSPP P C C+P P P
Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311
>AE014297-4221|AAF56779.1| 334|Drosophila melanogaster CG11719-PA
protein.
Length = 334
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -1
Query: 87 CSPPALPRPPGCLRCFPIRPCP 22
CSPP P C C+P P P
Sbjct: 290 CSPPCPYESPECGPCYPCAPTP 311
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,044,128
Number of Sequences: 53049
Number of extensions: 375187
Number of successful extensions: 1527
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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