Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00427
(456 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical ... 102 1e-22
AC087079-8|AAK27871.1| 88|Caenorhabditis elegans Hypothetical ... 44 7e-05
AF016433-6|AAB65391.1| 335|Caenorhabditis elegans Seven tm rece... 30 0.69
Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 28 2.8
AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical... 28 2.8
AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical... 28 2.8
U97401-1|AAB52466.2| 336|Caenorhabditis elegans Hypothetical pr... 27 6.5
U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily as... 27 6.5
U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine rece... 27 6.5
Z35597-1|CAA84645.1| 654|Caenorhabditis elegans Hypothetical pr... 27 8.6
AC024817-17|AAU87811.1| 178|Caenorhabditis elegans C-type lecti... 27 8.6
>AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical
protein Y37E3.8a protein.
Length = 145
Score = 102 bits (244), Expect = 1e-22
Identities = 42/79 (53%), Positives = 54/79 (68%)
Frame = +2
Query: 2 LRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFC 181
LRGHVS NAGG+HHHRIN DKYHPGYFGK+GMR FH KN+++C
Sbjct: 11 LRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINRDKYHPGYFGKVGMRVFHLNKNQHYC 70
Query: 182 PVLNLDKLWTLVSEQTRLK 238
P +N+++LW+LV ++ R K
Sbjct: 71 PTVNVERLWSLVPQEVRDK 89
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +1
Query: 250 SSGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414
+ GK PVI+ K P+ P+IV GGACVL A
Sbjct: 91 TGGKSPVIDCTKLGYFKVLGKGLLPETPLIVKARFFSHEAEQKIKKAGGACVLVA 145
>AC087079-8|AAK27871.1| 88|Caenorhabditis elegans Hypothetical
protein Y37E3.8b protein.
Length = 88
Score = 43.6 bits (98), Expect = 7e-05
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +2
Query: 143 MRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLK 238
MR FH KN+++CP +N+++LW+LV ++ R K
Sbjct: 1 MRVFHLNKNQHYCPTVNVERLWSLVPQEVRDK 32
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +1
Query: 250 SSGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 414
+ GK PVI+ K P+ P+IV GGACVL A
Sbjct: 34 TGGKSPVIDCTKLGYFKVLGKGLLPETPLIVKARFFSHEAEQKIKKAGGACVLVA 88
>AF016433-6|AAB65391.1| 335|Caenorhabditis elegans Seven tm
receptor protein 131 protein.
Length = 335
Score = 30.3 bits (65), Expect = 0.69
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -2
Query: 410 DSTQAPPTSLIFFSADFEKNFAFTMTGCLGSLPLPSNL*YPALTILMTGTLPLEQMHTSA 231
DS S +F+S D + M C+GSL L + + LTI+ G ++M+ S
Sbjct: 173 DSNTMSFVSGLFWSLDENGTKHWNMKDCIGSLGLAALMIVCCLTIVFCGVKTYKKMNDSG 232
Query: 230 SSV 222
+S+
Sbjct: 233 NSL 235
>Z82258-4|CAL44968.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 285 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 389
SW+ +++ Q P+T C ++K+ REE C
Sbjct: 5 SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38
>Z82258-3|CAL44967.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 285 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 389
SW+ +++ Q P+T C ++K+ REE C
Sbjct: 5 SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 2.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 78 PALPRPPGCLRCFPIRPCP 22
PA P+ P C C P +PCP
Sbjct: 50 PACPQAPSCPVCPPPQPCP 68
>AL023835-19|CAL44978.1| 1467|Caenorhabditis elegans Hypothetical
protein Y37A1B.17b protein.
Length = 1467
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 285 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 389
SW+ +++ Q P+T C ++K+ REE C
Sbjct: 5 SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38
>AL023835-18|CAL44977.1| 1538|Caenorhabditis elegans Hypothetical
protein Y37A1B.17a protein.
Length = 1538
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 285 SWILQVARQRQTPQTTCHSKSKVLLKISREENQGC 389
SW+ +++ Q P+T C ++K+ REE C
Sbjct: 5 SWV-RISNATQDPETRCSVAQDQIVKVVREEGDWC 38
>U97401-1|AAB52466.2| 336|Caenorhabditis elegans Hypothetical
protein F21A9.2 protein.
Length = 336
Score = 27.1 bits (57), Expect = 6.5
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +2
Query: 134 KLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPVARSPSSILSKLDTTS 301
KL M NF K P++NLD+ V T L +S+P A S S+ + TS
Sbjct: 156 KLEMPNFSTSKLSVQIPIINLDE--KNVRTSTPLDLSSSPHAPSVPSLSASCSPTS 209
>U58749-10|AAK18879.1| 465|Caenorhabditis elegans Temporarily
assigned gene nameprotein 224 protein.
Length = 465
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +2
Query: 77 GGEHHHRINMDKYHPGYF-----GKLGMRN-FHFRKNKNFCPVLNLDKLW 208
G E HH D YHP F +L + N + F KNK +C D+L+
Sbjct: 285 GVECHHHSTTDTYHPNCFRCETCRQLLVDNIYFFYKNKYYCGRHYADQLY 334
>U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine
receptor, class x protein47 protein.
Length = 301
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 193 VQNWTEILVLSKVEISHTKFAKVSR 119
+ NWT L LSKV H F ++R
Sbjct: 20 IANWTVFLFLSKVPSIHKSFGSLTR 44
>Z35597-1|CAA84645.1| 654|Caenorhabditis elegans Hypothetical
protein C36E8.1 protein.
Length = 654
Score = 26.6 bits (56), Expect = 8.6
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 125 YFGKLGMRNFHFRKNKNFCPVLNLDKLWTLV-SEQTRLKYASAPVARSPSSILSKLDTTS 301
+F R F KNK+ + + +V S LKY S PVAR S+I L
Sbjct: 476 FFLVFAFRYKEFVKNKDMLETIRRWGVGRVVHSPLEPLKYVSKPVARCFSAITRSLQLVY 535
Query: 302 C 304
C
Sbjct: 536 C 536
>AC024817-17|AAU87811.1| 178|Caenorhabditis elegans C-type lectin
protein 80 protein.
Length = 178
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/49 (22%), Positives = 26/49 (53%)
Frame = +2
Query: 137 LGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPVARSPSSILS 283
LG NF+++ ++++ + WT + +T LK+ + P++ L+
Sbjct: 105 LGWTNFNYQNSQDYVAESVTNAKWTAYNSETELKFVCSYYPLMPTTNLA 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,090,639
Number of Sequences: 27780
Number of extensions: 182141
Number of successful extensions: 510
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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