Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00425
         (734 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0672 + 27164628-27164792,27164903-27164965,27165298-271654...    52   6e-07
04_03_0826 + 20103105-20103697,20104222-20104391,20104487-201047...    31   0.72 
03_01_0016 + 131141-131236,131743-132043,132125-132341,132440-13...    31   0.95 
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874...    29   2.9  
01_05_0439 - 22159425-22159520,22160137-22160345,22161028-221610...    29   3.8  

>04_04_0672 +
           27164628-27164792,27164903-27164965,27165298-27165408,
           27165454-27165537,27166081-27166194,27166901-27167494,
           27167604-27167675,27167761-27167997
          Length = 479

 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 29/101 (28%), Positives = 47/101 (46%)
 Frame = +2

Query: 428 ECMERTNNKTFCCTIRQLSQECDQTRVVTPNEETEQTTYINTILATGPIRSLITFLVNKG 607
           + + +     FC  +   +       VVT  ++ E+  +I  I  T PI+ L  +LV KG
Sbjct: 267 DVLRKPTYSRFCALLDNYNPHQGYKEVVTQQDKHEEVAFIEEIARTAPIKYLHRYLVLKG 326

Query: 608 ITQLNEYPEQVELLRKIWFTKYARHWTGLCKCSCAFENVFM 730
           +    +Y +   +L  +WF  Y R   G    S AFE+VF+
Sbjct: 327 VAS-QDYEDFKRMLTSLWFDLYGR--GGSSSSSSAFEHVFV 364


>04_03_0826 +
           20103105-20103697,20104222-20104391,20104487-20104716,
           20104825-20104933,20104967-20105154,20105818-20105919,
           20106114-20106395,20106504-20106625,20106708-20107020,
           20107096-20107329,20107477-20107767,20107975-20108286
          Length = 981

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 22/68 (32%), Positives = 34/68 (50%)
 Frame = -3

Query: 246 VALLLRIVNDTTNNCAYLLESVLSCVALLTSHMIADQVGKDVVEDLARSLG*VISVTYPQ 67
           + L LR   +T + C Y LES+ + V  L++  IAD+   D   DL    G    +   +
Sbjct: 470 ILLGLREKYETYHKCKYTLESINAAV-YLSARYIADRHLPDKAIDLIDEAGSRARMESFK 528

Query: 66  KNKENQCN 43
           + KE QC+
Sbjct: 529 RKKEEQCS 536


>03_01_0016 +
           131141-131236,131743-132043,132125-132341,132440-132773,
           132883-132996,133065-133193,133293-133469,133555-133746,
           134844-134981,135327-135559,135900-136003,136633-136727,
           136817-137053,137801-137922,138252-138354,138750-138826,
           138909-139017,139107-139253,139953-140000,140292-140492,
           140589-140738,140917-141002,141088-141193,141278-141373,
           141759-141911,142647-142819,142923-142986,144056-144193,
           144548-144595,144690-144836,144907-144968,146540-146645,
           147357-147461,147548-147679,147765-147974,148070-148171,
           148261-148398
          Length = 1729

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 327 INNAFNYIQVNLQGKTTPMSRNDEAQSNLLNVPENVWSGPTIRPFV 464
           +N A+N +Q  +Q +  P    D  +SN++N    +    T+R FV
Sbjct: 455 VNTAYNLLQYEVQSRVFPAILKDATKSNVVNYLWQINPSLTLRGFV 500


>07_03_0561 +
           19485218-19485242,19485323-19486467,19487354-19487476,
           19487553-19487626,19487886-19487946,19488285-19488370,
           19488795-19488864,19489026-19489122,19489342-19489481,
           19490225-19490308,19490313-19490346,19491833-19491951
          Length = 685

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 102 CGPDLQQHPSQLDQQSCDWSARQHSSK 182
           CGPD Q+   Q  Q+S  W +++ +SK
Sbjct: 320 CGPDAQRTEKQAKQESRKWGSKKGTSK 346


>01_05_0439 -
           22159425-22159520,22160137-22160345,22161028-22161066,
           22161196-22161356,22161447-22161518,22162002-22162183,
           22162580-22162703,22164196-22164299,22165526-22165725,
           22165838-22166069,22166156-22166239,22166329-22166386,
           22166724-22166771,22167924-22168081,22168451-22168501,
           22168585-22168658,22168760-22168835,22169685-22169729,
           22169833-22169899,22169978-22170095,22170580-22170775,
           22171551-22171640,22171985-22172039,22172755-22172975,
           22173362-22173454,22173608-22173721,22173918-22173981,
           22174081-22174181,22174306-22174447,22174528-22174729,
           22174883-22174976,22176172-22176348
          Length = 1248

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +3

Query: 270 DSTTDDDLLRVSEEMFNADINNAFNYIQVNL 362
           D  T  D L VS EM+  D NN  +Y+Q +L
Sbjct: 673 DMLTIRDALEVSAEMYKKDPNNVQDYVQRHL 703


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,616,567
Number of Sequences: 37544
Number of extensions: 367066
Number of successful extensions: 920
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)