Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00424
(789 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 149 2e-36
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 149 2e-36
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 149 2e-36
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 48 6e-06
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 48 6e-06
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 48 6e-06
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 41 9e-04
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 40 0.002
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 38 0.011
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 38 0.011
Z50029-1|CAA90340.2| 460|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 31 0.71
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 2.2
Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 29 5.0
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr... 29 5.0
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 6.6
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 6.6
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 6.6
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 149 bits (361), Expect = 2e-36
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +1
Query: 1 DVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFN 180
DVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFN
Sbjct: 218 DVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFN 277
Query: 181 VKNVSVKELRRGYVAGDSKNNPPK 252
VKNVSVK++RRG V DSK +P K
Sbjct: 278 VKNVSVKDIRRGSVCSDSKQDPAK 301
Score = 145 bits (351), Expect = 4e-35
Identities = 65/92 (70%), Positives = 75/92 (81%)
Frame = +3
Query: 234 QKQPT*GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 413
++ P A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK E
Sbjct: 296 KQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVED 355
Query: 414 NPKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 509
PK +KSGDA IV L+P+KPLCVESF ++ PL
Sbjct: 356 FPKFLKSGDAGIVELIPTKPLCVESFTDYAPL 387
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 GRFAVRDMRQTVAVGVIKAV 568
GRFAVRDMRQTVAVGVIK+V
Sbjct: 388 GRFAVRDMRQTVAVGVIKSV 407
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 149 bits (361), Expect = 2e-36
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +1
Query: 1 DVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFN 180
DVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFN
Sbjct: 252 DVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFN 311
Query: 181 VKNVSVKELRRGYVAGDSKNNPPK 252
VKNVSVK++RRG V DSK +P K
Sbjct: 312 VKNVSVKDIRRGSVCSDSKQDPAK 335
Score = 145 bits (351), Expect = 4e-35
Identities = 65/92 (70%), Positives = 75/92 (81%)
Frame = +3
Query: 234 QKQPT*GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 413
++ P A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK E
Sbjct: 330 KQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVED 389
Query: 414 NPKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 509
PK +KSGDA IV L+P+KPLCVESF ++ PL
Sbjct: 390 FPKFLKSGDAGIVELIPTKPLCVESFTDYAPL 421
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 GRFAVRDMRQTVAVGVIKAV 568
GRFAVRDMRQTVAVGVIK+V
Sbjct: 422 GRFAVRDMRQTVAVGVIKSV 441
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 149 bits (361), Expect = 2e-36
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +1
Query: 1 DVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFN 180
DVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EAVPGDNVGFN
Sbjct: 252 DVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEAVPGDNVGFN 311
Query: 181 VKNVSVKELRRGYVAGDSKNNPPK 252
VKNVSVK++RRG V DSK +P K
Sbjct: 312 VKNVSVKDIRRGSVCSDSKQDPAK 335
Score = 145 bits (351), Expect = 4e-35
Identities = 65/92 (70%), Positives = 75/92 (81%)
Frame = +3
Query: 234 QKQPT*GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 413
++ P A F AQVI++NHPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK E
Sbjct: 330 KQDPAKEARTFHAQVIIMNHPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVED 389
Query: 414 NPKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 509
PK +KSGDA IV L+P+KPLCVESF ++ PL
Sbjct: 390 FPKFLKSGDAGIVELIPTKPLCVESFTDYAPL 421
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +2
Query: 509 GRFAVRDMRQTVAVGVIKAV 568
GRFAVRDMRQTVAVGVIK+V
Sbjct: 422 GRFAVRDMRQTVAVGVIKSV 441
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 48.4 bits (110), Expect = 6e-06
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Frame = +1
Query: 4 VYKIGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPGDN 168
VY I G GTV G++E G+LK G I + T VKSV E + + +A PGD
Sbjct: 259 VYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQ 318
Query: 169 VGFNVKNVSVKELRRGYV 222
+G ++ + K++RRG V
Sbjct: 319 LGVLLRGLGPKDVRRGCV 336
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 48.4 bits (110), Expect = 6e-06
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Frame = +1
Query: 4 VYKIGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPGDN 168
VY I G GTV G++E G+LK G I + T VKSV E + + +A PGD
Sbjct: 260 VYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQ 319
Query: 169 VGFNVKNVSVKELRRGYV 222
+G ++ + K++RRG V
Sbjct: 320 LGVLLRGLGPKDVRRGCV 337
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 48.4 bits (110), Expect = 6e-06
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Frame = +1
Query: 4 VYKIGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPGDN 168
VY I G GTV G++E G+LK G I + T VKSV E + + +A PGD
Sbjct: 260 VYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPGDQ 319
Query: 169 VGFNVKNVSVKELRRGYV 222
+G ++ + K++RRG V
Sbjct: 320 LGVLLRGLGPKDVRRGCV 337
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/82 (30%), Positives = 43/82 (52%)
Frame = +3
Query: 264 FTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDA 443
F A+V+VL H I++GY+ VL +A + +D++TG+ K +K +
Sbjct: 431 FDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKGVIATIDKKTGEKKRA--KFVKQDEK 488
Query: 444 AIVNLVPSKPLCVESFQEFPPL 509
I+ L +P +E F+E+P L
Sbjct: 489 CIMRLESPEPFVLEPFKEYPYL 510
Score = 44.8 bits (101), Expect = 7e-05
Identities = 20/71 (28%), Positives = 37/71 (52%)
Frame = +1
Query: 10 KIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 189
K +GTV +G++E+G ++ G +V P +V + + V GDN+ F +K
Sbjct: 347 KYSEMGTVIIGKMESGCVQKGDTLVVMPNKQPVQVLQIWADDVETERVVAGDNIKFKLKG 406
Query: 190 VSVKELRRGYV 222
+ EL+ G++
Sbjct: 407 IEENELQGGFI 417
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 DVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQEAVPGDN 168
D+Y + G+GT+ G + +G ++ I++ P + + +KS+ + G +
Sbjct: 379 DIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVGIVKCGQS 438
Query: 169 VGFNVKNVSVKELRRGYVAGDSKNNP 246
F +K + K++R+G V D K P
Sbjct: 439 ASFALKKIPKKDVRKGMVLVDPKVKP 464
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 DVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQEAVPGDN 168
D+Y + G+GT+ G + +G ++ I++ P + + +KS+ + G +
Sbjct: 380 DIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRCLVGIVKCGQS 439
Query: 169 VGFNVKNVSVKELRRGYVAGDSKNNP 246
F +K + K++R+G V D K P
Sbjct: 440 ASFALKKIPKKDVRQGMVLVDPKVKP 465
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 13 IGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPGDNVGFNVK 186
I G GTV VG +E GVLK G V + T +++ ++++E GD+ G +
Sbjct: 250 ITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAGDHCGVLCR 309
Query: 187 NVSVKELRRGYVAG 228
V ++RG AG
Sbjct: 310 GVKGDTVKRGMWAG 323
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 37.5 bits (83), Expect = 0.011
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = +1
Query: 13 IGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPGDNVGFNVK 186
I G GTV VG +E GVLK G V + T +++ ++++E GD+ G +
Sbjct: 250 ITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAGDHCGVLCR 309
Query: 187 NVSVKELRRGYVAG 228
V ++RG AG
Sbjct: 310 GVKGDTVKRGMWAG 323
>Z50029-1|CAA90340.2| 460|Caenorhabditis elegans Hypothetical
protein ZC504.1 protein.
Length = 460
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +1
Query: 427 SSLEMQPLSTWYLPSLYV*SPSRNSHPWSFCCP*HEADSC 546
+S++ PL T P Y SP+ W FCC H SC
Sbjct: 170 NSMKCNPLETSSCPKTYYCSPAVPGAHWGFCCSVHIEASC 209
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 7 YKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNV 183
+ I G GTV G V GVL+ T + F N VK++E + + + G F V
Sbjct: 210 FAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGARAAFLV 268
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 7 YKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNV 183
+ I G GTV G V GVL+ T + F N VK++E + + + G F V
Sbjct: 169 FAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGARAAFLV 227
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 31.5 bits (68), Expect = 0.71
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Frame = +1
Query: 1 DVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITT----EVKSVEMHHEALQEAVPGDN 168
++Y + +G V G + G L G V+ P T V S+ +A+ PG+
Sbjct: 409 ELYNVPHVGQVVGGMLSEGQLHEGADVLVGPMKDGTFEKITVGSIRRSRQAVGCVNPGEA 468
Query: 169 VGFNVKNVSVKELRRGYVAGDSKNNPP 249
++ LRRG V + + PP
Sbjct: 469 ASISLNLPDGVSLRRGMVLAEIDHQPP 495
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 64 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 189
KPGTI F P ITTE K H L+ + GD +++
Sbjct: 360 KPGTIQWFDPVTITTESKM----HVTLENTIDGDMTSRGIRS 397
>Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical
protein F57B1.9a protein.
Length = 357
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = -1
Query: 684 MKYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLM 529
M Y +C ++N Y L ++A+V LPPP ++ + ++ A C++
Sbjct: 188 MMYNNCRYRYSLNVLHY--ELYCQTSAVVNLPPPKAISIMEIVIQFAIPCII 237
>Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical
protein F35C5.4 protein.
Length = 172
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = -2
Query: 215 PRRNSLTDTFFTLKPTLSPG-TASWRASWCISTDLTSVVMLAGAKTTMVPGFN--TPVST 45
P + FT +S + S R S +S D T V + + VP + VST
Sbjct: 28 PEDGATVGNTFTQSSAVSESQSTSERTSRSVSPDSTPVRVTTSTLLSTVPTSQDISGVST 87
Query: 44 LPTGTVPIPPILY 6
PT +PPI Y
Sbjct: 88 APTTKATLPPITY 100
>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical protein
C46A5.4 protein.
Length = 1432
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 145 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGL 258
+EA+P N + ++V RR +VAGD ++N GL
Sbjct: 983 KEALPQGNQERDCRSVLQNRQRRCFVAGDERSNEQPGL 1020
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 327 LDCHTAHIACKFAEIKEKVDRRTGKSTE 410
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 327 LDCHTAHIACKFAEIKEKVDRRTGKSTE 410
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 327 LDCHTAHIACKFAEIKEKVDRRTGKSTE 410
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,674,637
Number of Sequences: 27780
Number of extensions: 407325
Number of successful extensions: 1218
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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