Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00423
(770 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11230.1 68416.m01366 yippee family protein similar to qdgl-1... 67 1e-11
At2g40110.1 68415.m04931 yippee family protein similar to mdgl-1... 66 2e-11
At2g40110.2 68415.m04930 yippee family protein similar to mdgl-1... 63 2e-10
At4g27740.1 68417.m03986 yippee family protein similar to qdgl-1... 61 7e-10
At3g08990.1 68416.m01051 yippee family protein similar to qdgl-1... 61 9e-10
At3g55890.1 68416.m06211 yippee family protein similar to mdgl-1... 60 1e-09
At5g53940.1 68418.m06711 yippee family protein similar to mdgl-1... 59 3e-09
At1g77520.1 68414.m09027 O-methyltransferase family 2 protein si... 30 1.5
At5g46030.1 68418.m05661 expressed protein contains Pfam profile... 29 2.6
At4g15215.1 68417.m02332 ABC transporter family protein similar ... 29 3.4
At1g62270.1 68414.m07025 F-box family protein contains Pfam:PF00... 28 5.9
At3g21930.1 68416.m02764 receptor-like protein kinase-related co... 28 7.9
At3g21920.1 68416.m02763 pollen coat receptor kinase, putative c... 28 7.9
>At3g11230.1 68416.m01366 yippee family protein similar to qdgl-1
[Coturnix coturnix] GI:10441650, Yippee protein [Homo
sapiens] GI:5713281; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 129
Score = 66.9 bits (156), Expect = 1e-11
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +1
Query: 256 VMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDG 411
+M+TG H V D+ C CG+ +GW YEFA E+NQ+YKEG+ +LER V DG
Sbjct: 59 MMMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKVWGPDG 110
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +2
Query: 80 MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQD 253
MG++FL ++ G + +SC C NL +++S F G+A+LF KVVN+ + +D
Sbjct: 1 MGRLFLVNLEG-KSYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGKKED 57
>At2g40110.1 68415.m04931 yippee family protein similar to mdgl-1
[Mus musculus] GI:10441648, Yippee protein [Drosophila
melanogaster] GI:5713279; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 130
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/52 (50%), Positives = 39/52 (75%)
Frame = +1
Query: 256 VMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDG 411
+M+TG+H V D+ C +CG+ +GW YE A E+NQ+YKEG+ +LER ++ DG
Sbjct: 59 LMMTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLERFKISGPDG 110
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = +2
Query: 80 MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQD 253
MG++F+ ++ G +++SC C +L ++IS F G+A+LF+KV N+ E ++
Sbjct: 1 MGRLFVVNLEG-KIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEE 57
>At2g40110.2 68415.m04930 yippee family protein similar to mdgl-1
[Mus musculus] GI:10441648, Yippee protein [Drosophila
melanogaster] GI:5713279; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 110
Score = 62.9 bits (146), Expect = 2e-10
Identities = 24/44 (54%), Positives = 35/44 (79%)
Frame = +1
Query: 256 VMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILER 387
+M+TG+H V D+ C +CG+ +GW YE A E+NQ+YKEG+ +LER
Sbjct: 59 LMMTGKHTVADIFCVSCGSIVGWKYETAHEKNQKYKEGKSVLER 102
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/58 (32%), Positives = 36/58 (62%)
Frame = +2
Query: 80 MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQD 253
MG++F+ ++ G +++SC C +L ++IS F G+A+LF+KV N+ E ++
Sbjct: 1 MGRLFVVNLEG-KIYSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANVSIGETEE 57
>At4g27740.1 68417.m03986 yippee family protein similar to qdgl-1
[Coturnix coturnix] GI:10441650, Yippee protein [Homo
sapiens] GI:5713281; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 148
Score = 61.3 bits (142), Expect = 7e-10
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +1
Query: 259 MLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESD 408
+LTG H V D+SC +C LGW YE A E +Q+YKEG+ I E+A + + D
Sbjct: 98 LLTGLHTVADISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKIVKED 147
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/48 (39%), Positives = 29/48 (60%)
Frame = +2
Query: 110 GTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQD 253
G RL+SC +C ++ ++IS F G TGRAFLF +N++ +D
Sbjct: 48 GPRLYSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIVVGPKED 95
>At3g08990.1 68416.m01051 yippee family protein similar to qdgl-1
[Coturnix coturnix] GI:10441650, Yippee protein
[Drosophila melanogaster] GI:5713279; contains Pfam
profile PF03226: Yippee putative zinc-binding protein
Length = 128
Score = 60.9 bits (141), Expect = 9e-10
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = +1
Query: 256 VMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILER 387
VM+TG H V D+ C +CG+ +GW YE A +++Q+YKEG+ ILER
Sbjct: 59 VMITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILER 102
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 80 MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSE 244
MG++F+ + G ++SC C + +++IS F GRA+LF VVN+ E
Sbjct: 1 MGRLFVIDLEGL-VYSCKYCQTHFAVTNDIISKSFHCKHGRAYLFDNVVNVTVGE 54
>At3g55890.1 68416.m06211 yippee family protein similar to mdgl-1
[Mus musculus] GI:10441648, Yippee protein [Drosophila
melanogaster] GI:5713279; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 121
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +1
Query: 256 VMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDGIEEIQVNV 435
+M+TG H V D+ C CG+ +GW YEFA E++Q+YKEG+ +LE ++ ++ +
Sbjct: 59 MMITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLELYKISGPHDSNDLVSDG 118
Query: 436 DD 441
DD
Sbjct: 119 DD 120
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +2
Query: 80 MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQD 253
MG++F+ + G ++ C C +L+ +++S F GRA+LF+ VVN+ E +D
Sbjct: 1 MGRVFMVDLEGN-IYICKLCKTHLSTDQDIMSKSFQCKNGRAYLFNNVVNVSVGEKED 57
>At5g53940.1 68418.m06711 yippee family protein similar to mdgl-1
[Mus musculus] GI:10441648, Yippee protein [Drosophila
melanogaster] GI:5713279; contains Pfam profile PF03226:
Yippee putative zinc-binding protein
Length = 129
Score = 59.3 bits (137), Expect = 3e-09
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +1
Query: 256 VMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERA-LVTESDGIEEIQVN 432
+ML+G H V D+ C CG +GW YE A E+ Q+YKEG+ +LER +V E D E+ ++
Sbjct: 59 LMLSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIVDEIDLSTEVYID 118
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/58 (31%), Positives = 32/58 (55%)
Frame = +2
Query: 80 MGKIFLDHIGGTRLFSCASCDVNLTNRSELISTRFTGATGRAFLFHKVVNLIYSEVQD 253
MG+IF + G R + C C +L +L+S F G+A+LF++ VN+ +++
Sbjct: 1 MGRIFTVELEG-RSYRCRFCRTHLALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEE 57
>At1g77520.1 68414.m09027 O-methyltransferase family 2 protein
similar to caffeic acid 3-O-methyltransferase GB:O23760
[Clarkia breweri], [SP|Q00763] [Populus tremuloides]
Length = 381
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 60 TKLNFKKWVKYFLIILEERDYFHAHHAMSILRIV 161
T++ FK W +ILE RD F++ H M I +
Sbjct: 150 TQVFFKTWTNLKDVILEGRDAFNSAHGMKIFEYI 183
>At5g46030.1 68418.m05661 expressed protein contains Pfam profile
PF05129: Putative zinc binding domain (DUF701)
Length = 120
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/70 (24%), Positives = 29/70 (41%)
Frame = +1
Query: 241 GSSGSVMLTGRHMVRDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDGIEE 420
GSS ++ +H++ +C+ C TE Y E ER E D ++E
Sbjct: 31 GSSVECIIDMKHLIGKAACRICEESFSTTITALTEAIDIYSEWIDECERVNTAEDDVVQE 90
Query: 421 IQVNVDD*NE 450
+ V++ E
Sbjct: 91 EEEEVEEEEE 100
>At4g15215.1 68417.m02332 ABC transporter family protein similar to
PDR5-like ABC transporter [Spirodela polyrhiza]
GI:1514643; contains Pfam profile PF00005: ABC
transporter
Length = 1390
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/46 (30%), Positives = 29/46 (63%)
Frame = +1
Query: 286 DVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDGIEEI 423
D++CK+ +LG + A +++ YKE ++++E+ L + S G E +
Sbjct: 1059 DITCKSAEHRLGMDFAQAYKDSTLYKENKMVVEQ-LSSASLGSEAL 1103
>At1g62270.1 68414.m07025 F-box family protein contains Pfam:PF00646
F-box domain
Length = 383
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 27 QFNFQINLSVLTKLNFKKWVKYFLIIL 107
Q+NF N + TK++F K K FL+++
Sbjct: 38 QWNFLFNDQIFTKMHFDKAEKQFLVLI 64
>At3g21930.1 68416.m02764 receptor-like protein kinase-related
contains Pfam profile: PF01657 Domain of unknown
function that is usually associated with protein kinase
domain Pfam:PF00069; similar to receptor-like protein
kinase 4 (GI:13506745) and receptor-like protein kinase
5 (GI:13506747) [Arabidopsis thaliana]
Length = 300
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 283 RDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDGIEEIQVNVDD 441
R C++C G YE + RYKE + ++ LV S Q+N DD
Sbjct: 127 RGPKCQSCVVTAG--YELLRKRCPRYKEAIIWYDQCLVEFSSLDTSGQINYDD 177
>At3g21920.1 68416.m02763 pollen coat receptor kinase, putative
contains Pfam profile: PF01657 Domain of unknown
function that is usually associated with protein kinase
domain Pfam:PF00069; similar to receptor-like protein
kinase 4 (GI:13506745) and receptor-like protein kinase
5 (GI:13506747) [Arabidopsis thaliana]; similar to
receptor-like protein kinase homolog RK20-1 (GI:4530126)
[Phaseolus vulgaris]
Length = 278
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 283 RDVSCKNCGTKLGWVYEFATEENQRYKEGRVILERALVTESDGIEEIQVNVDD 441
R C++C G YE + RYKE + ++ LV S Q+N DD
Sbjct: 105 RGPKCQSCVVTAG--YELLRKRCPRYKEAIIWYDQCLVEFSSLDTSGQINYDD 155
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,968,215
Number of Sequences: 28952
Number of extensions: 248649
Number of successful extensions: 605
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1716774400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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