Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00422X
         (474 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   3.1  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   7.2  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            22   9.5  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 100 KTEKVRSWSDVENGGCLASPHGVGAT 177
           +TEK  S  D  NG C   P+ +G T
Sbjct: 894 QTEKGISICDAINGNCHCKPNVIGRT 919



 Score = 22.2 bits (45), Expect = 9.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 102 NRKGPILERCRE 137
           NR GP  ERC+E
Sbjct: 373 NRDGPNCERCKE 384


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = -2

Query: 341 CCNIWHWGSVDS 306
           CC +W W  ++S
Sbjct: 88  CCRLWRWPDLNS 99


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 296 PHARFQLSGNSGRKTAAAAQAYYG 225
           P A    S +SG+++ A  QA YG
Sbjct: 427 PPAGMNASMSSGKRSTATHQAEYG 450


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,014
Number of Sequences: 2352
Number of extensions: 9708
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)