Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00417
         (742 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q01053 Cluster: Gene 58 protein; n=3; Herpesviridae|Rep...    36   1.0  
UniRef50_Q9VNZ5 Cluster: CG32447-PA, isoform A; n=4; Diptera|Rep...    34   4.2  
UniRef50_UPI000051A012 Cluster: PREDICTED: similar to CG32447-PB...    33   5.6  
UniRef50_Q5TMI1 Cluster: ENSANGP00000028761; n=3; Endopterygota|...    33   5.6  

>UniRef50_Q01053 Cluster: Gene 58 protein; n=3; Herpesviridae|Rep:
           Gene 58 protein - Saimiriine herpesvirus 2 (strain 11)
           (SaHV-2) (Herpesvirus saimiri)
          Length = 357

 Score = 35.9 bits (79), Expect = 1.0
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +2

Query: 170 VAIIVTLNFYIKQGN*LKLLFACLLVCCIFLFSINSTTWVKTPFNPIFVIYLH 328
           V+++  L+ ++   N L LLF  +L CC+F    N+   V   F  + +I +H
Sbjct: 234 VSVVQRLDIFVGMQNYLFLLFVSMLCCCMFSLPSNAICVVLETFAVVIIIVIH 286


>UniRef50_Q9VNZ5 Cluster: CG32447-PA, isoform A; n=4; Diptera|Rep:
           CG32447-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 706

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +2

Query: 224 LLFACLLVCCIFLFSINSTTWVKTPFNPIFVIY 322
           L+FA LLV C+FL S+N   ++  P+  + +++
Sbjct: 263 LVFAALLVKCVFLISLNGGVYLPAPYQGLLLLF 295


>UniRef50_UPI000051A012 Cluster: PREDICTED: similar to CG32447-PB,
           isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG32447-PB, isoform B - Apis mellifera
          Length = 464

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 224 LLFACLLVCCIFLFSINSTTWVKTPFNPI 310
           L+FA LLV C+FL S+NS  ++  P+  +
Sbjct: 178 LVFAALLVKCVFLLSLNSGVYLPAPYQAL 206


>UniRef50_Q5TMI1 Cluster: ENSANGP00000028761; n=3;
           Endopterygota|Rep: ENSANGP00000028761 - Anopheles
           gambiae str. PEST
          Length = 718

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +2

Query: 224 LLFACLLVCCIFLFSINSTTWVKTPFNPIFVIY 322
           L+FA LLV C+FL S+N   ++  P+  + +++
Sbjct: 420 LVFASLLVKCVFLISLNGGVYLPAPYQGLLLLF 452


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,663,627
Number of Sequences: 1657284
Number of extensions: 12966521
Number of successful extensions: 23536
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23530
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)