Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00417
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.0  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    23   3.4  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   6.0  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 33  VMVTLVHSVNTIYSLQRSLQANLHLS 110
           V++ L++++  IYS+      N HLS
Sbjct: 37  VLMFLIYTITEIYSVYERRYMNAHLS 62


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = +1

Query: 91  KPIYTY--PSETGKASEPPIHPIKVINFSGHHRHLK 192
           K +YTY  P    K S PP    + IN     RH+K
Sbjct: 36  KLLYTYRQPYPRQKKSHPPQWTWQCINQRCERRHIK 71


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 123 TCFTRISVDWLEGFFVANK 67
           T FTR  +D LEG F   +
Sbjct: 132 TTFTRAQLDLLEGLFAKTR 150


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/62 (19%), Positives = 30/62 (48%)
 Frame = -1

Query: 637 SNKKILTRIIVA*RTRHTV*SFQAKRLWLCSNHVSDNIIILIPHNFEVCTIIPTASAMNQ 458
           S+  +L++II   ++       + +R+W   N  ++ ++    ++ +VC  IP +  +  
Sbjct: 73  SDDPVLSQIIANKQSGAAAPDARTQRVWSQYNFTNNVLVHRSQNSNDVCLAIPESLVIKL 132

Query: 457 YD 452
            D
Sbjct: 133 VD 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,250
Number of Sequences: 336
Number of extensions: 3963
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)